RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 POGKQ9P215 609 aa29.55■■■□□ 2.32
TRPT1-201ENST00000317459 CDC42BPGQ6DT37 1551 aa29.55■■■□□ 2.32
TRPT1-201ENST00000317459 DLC1Q96QB1 1528 aa29.55■■■□□ 2.32
TRPT1-201ENST00000317459 C1orf167Q5SNV9 1468 aa29.55■■■□□ 2.32
TRPT1-201ENST00000317459 SAFB2Q14151 953 aaKnown RBP eCLIP29.52■■■□□ 2.32
TRPT1-201ENST00000317459 DISP3Q9P2K9 1392 aa29.52■■■□□ 2.32
TRPT1-201ENST00000317459 AHDC1Q5TGY3 1603 aaPredicted RBP29.51■■■□□ 2.31
TRPT1-201ENST00000317459 KIAA1210Q9ULL0 1709 aa29.5■■■□□ 2.31
TRPT1-201ENST00000317459 COL16A1Q07092 1604 aaPredicted RBP29.47■■■□□ 2.31
TRPT1-201ENST00000317459 ORAI2Q96SN7 254 aa29.46■■■□□ 2.31
TRPT1-201ENST00000317459 MED1Q15648 1581 aaPredicted RBP29.46■■■□□ 2.31
TRPT1-201ENST00000317459 NUTM2FA1L443 756 aa29.45■■■□□ 2.31
TRPT1-201ENST00000317459 JCADQ9P266 1359 aa29.44■■■□□ 2.3
TRPT1-201ENST00000317459 NBPF1Q3BBV0 1214 aa29.44■■■□□ 2.3
TRPT1-201ENST00000317459 TONSLQ96HA7 1378 aa29.43■■■□□ 2.3
TRPT1-201ENST00000317459 ESCO1Q5FWF5 840 aa29.43■■■□□ 2.3
TRPT1-201ENST00000317459 NHSL1Q5SYE7 1610 aa29.42■■■□□ 2.3
TRPT1-201ENST00000317459 DDX17Q92841 729 aaKnown RBP29.41■■■□□ 2.3
TRPT1-201ENST00000317459 FMN2Q9NZ56 1722 aa29.41■■■□□ 2.3
TRPT1-201ENST00000317459 MINK1Q8N4C8 1332 aaPredicted RBP29.4■■■□□ 2.3
TRPT1-201ENST00000317459 ARHGEF28Q8N1W1 1705 aaKnown RBP29.39■■■□□ 2.3
TRPT1-201ENST00000317459 HIRIP3Q9BW71 556 aaPredicted RBP29.38■■■□□ 2.29
TRPT1-201ENST00000317459 ADGRB2O60241 1585 aa29.36■■■□□ 2.29
TRPT1-201ENST00000317459 LRRC59Q96AG4 307 aaKnown RBP29.35■■■□□ 2.29
TRPT1-201ENST00000317459 PHF23Q9BUL5 403 aaPredicted RBP29.35■■■□□ 2.29
TRPT1-201ENST00000317459 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
TRPT1-201ENST00000317459 ROCK2O75116 1388 aaKnown RBP29.32■■■□□ 2.28
TRPT1-201ENST00000317459 NPHP3Q7Z494 1330 aa29.32■■■□□ 2.28
TRPT1-201ENST00000317459 EIF3AQ14152 1382 aaKnown RBP29.31■■■□□ 2.28
TRPT1-201ENST00000317459 SOS2Q07890 1332 aaPredicted RBP29.3■■■□□ 2.28
TRPT1-201ENST00000317459 SPATA31A6Q5VVP1 1343 aa29.3■■■□□ 2.28
TRPT1-201ENST00000317459 WASLO00401 505 aaPredicted RBP29.3■■■□□ 2.28
TRPT1-201ENST00000317459 NBPF8Q3BBV2 869 aa29.3■■■□□ 2.28
TRPT1-201ENST00000317459 SHPRHQ149N8 1683 aa29.3■■■□□ 2.28
TRPT1-201ENST00000317459 ANKARQ7Z5J8 1434 aa29.29■■■□□ 2.28
TRPT1-201ENST00000317459 FOXO3O43524 673 aa29.29■■■□□ 2.28
TRPT1-201ENST00000317459 KIF1AQ12756 1690 aa29.28■■■□□ 2.28
TRPT1-201ENST00000317459 PHF8Q9UPP1 1060 aa29.27■■■□□ 2.28
TRPT1-201ENST00000317459 CENPJQ9HC77 1338 aaPredicted RBP29.26■■■□□ 2.27
TRPT1-201ENST00000317459 TULP4Q9NRJ4 1543 aa29.25■■■□□ 2.27
TRPT1-201ENST00000317459 RGPD8O14715 1765 aaPredicted RBP29.24■■■□□ 2.27
TRPT1-201ENST00000317459 XPCQ01831 940 aaPredicted RBP29.24■■■□□ 2.27
TRPT1-201ENST00000317459 CLSPNQ9HAW4 1339 aa29.23■■■□□ 2.27
TRPT1-201ENST00000317459 PNPLA6Q8IY17 1366 aa29.23■■■□□ 2.27
TRPT1-201ENST00000317459 USP32Q8NFA0 1604 aa29.23■■■□□ 2.27
TRPT1-201ENST00000317459 NUTM2BA6NNL0 878 aaPredicted RBP29.22■■■□□ 2.27
TRPT1-201ENST00000317459 NUTM2EB1AL46 878 aaPredicted RBP29.22■■■□□ 2.27
TRPT1-201ENST00000317459 NUTM2AQ8IVF1 878 aaPredicted RBP29.22■■■□□ 2.27
TRPT1-201ENST00000317459 PXDNQ92626 1479 aa29.22■■■□□ 2.27
TRPT1-201ENST00000317459 MEX3CQ5U5Q3 659 aaKnown RBP29.21■■■□□ 2.27
TRPT1-201ENST00000317459 PRR36Q9H6K5 1346 aa29.2■■■□□ 2.27
TRPT1-201ENST00000317459 CDK19Q9BWU1 502 aa29.2■■■□□ 2.26
TRPT1-201ENST00000317459 GPRASP1Q5JY77 1395 aa29.2■■■□□ 2.26
TRPT1-201ENST00000317459 LRP6O75581 1613 aa29.2■■■□□ 2.26
TRPT1-201ENST00000317459 PMFBP1Q8TBY8 1022 aa29.19■■■□□ 2.26
TRPT1-201ENST00000317459 RALGAPBQ86X10 1494 aa29.18■■■□□ 2.26
TRPT1-201ENST00000317459 KRT28Q7Z3Y7 464 aa29.18■■■□□ 2.26
TRPT1-201ENST00000317459 CCER1Q8TC90 406 aaPredicted RBP29.18■■■□□ 2.26
TRPT1-201ENST00000317459 CARD11Q9BXL7 1154 aa29.18■■■□□ 2.26
TRPT1-201ENST00000317459 QRICH2Q9H0J4 1663 aa29.17■■■□□ 2.26
TRPT1-201ENST00000317459 NUDT16Q96DE0 195 aaKnown RBP29.16■■■□□ 2.26
TRPT1-201ENST00000317459 PSME1Q06323 249 aa29.15■■■□□ 2.26
TRPT1-201ENST00000317459 ILDR2Q71H61 639 aa29.15■■■□□ 2.26
TRPT1-201ENST00000317459 ATP7BP35670 1465 aa29.14■■■□□ 2.26
TRPT1-201ENST00000317459 SRPK2P78362 688 aaKnown RBP29.12■■■□□ 2.25
TRPT1-201ENST00000317459 NGDNQ8NEJ9 315 aaKnown RBP29.11■■■□□ 2.25
TRPT1-201ENST00000317459 SPATA31A3Q5VYP0 1347 aa29.11■■■□□ 2.25
TRPT1-201ENST00000317459 RGS17Q9UGC6 210 aaPredicted RBP29.1■■■□□ 2.25
TRPT1-201ENST00000317459 TIMELESSQ9UNS1 1208 aa29.1■■■□□ 2.25
TRPT1-201ENST00000317459 ITSN1Q15811 1721 aa29.1■■■□□ 2.25
TRPT1-201ENST00000317459 CCDC61Q9Y6R9 512 aa29.08■■■□□ 2.25
TRPT1-201ENST00000317459 COL22A1Q8NFW1 1626 aaPredicted RBP29.08■■■□□ 2.25
TRPT1-201ENST00000317459 SBNO1A3KN83 1393 aa29.07■■■□□ 2.24
TRPT1-201ENST00000317459 TNS3Q68CZ2 1445 aa29.07■■■□□ 2.24
TRPT1-201ENST00000317459 EVC2Q86UK5 1308 aa29.07■■■□□ 2.24
TRPT1-201ENST00000317459 CABP2Q9NPB3 220 aa29.07■■■□□ 2.24
TRPT1-201ENST00000317459 ADAMTS2O95450 1211 aa29.06■■■□□ 2.24
TRPT1-201ENST00000317459 LMOD2Q6P5Q4 547 aa29.05■■■□□ 2.24
TRPT1-201ENST00000317459 C8orf37Q96NL8 207 aa29.03■■■□□ 2.24
TRPT1-201ENST00000317459 TOPAZ1Q8N9V7 1692 aa29.02■■■□□ 2.24
TRPT1-201ENST00000317459 ARHGEF10O15013 1369 aa29.01■■■□□ 2.24
TRPT1-201ENST00000317459 PLEKHG3A1L390 1219 aa29■■■□□ 2.23
TRPT1-201ENST00000317459 ZNF772Q68DY9 489 aaPredicted RBP29■■■□□ 2.23
TRPT1-201ENST00000317459 PPIP5K1Q6PFW1 1433 aa29■■■□□ 2.23
TRPT1-201ENST00000317459 ACEP12821 1306 aa28.99■■■□□ 2.23
TRPT1-201ENST00000317459 POTEAQ6S8J7 498 aa28.99■■■□□ 2.23
TRPT1-201ENST00000317459 AFF2P51816 1311 aa28.98■■■□□ 2.23
TRPT1-201ENST00000317459 PAK3O75914 559 aaPredicted RBP28.98■■■□□ 2.23
TRPT1-201ENST00000317459 POLR3AO14802 1390 aaPredicted RBP28.98■■■□□ 2.23
TRPT1-201ENST00000317459 SBNO2Q9Y2G9 1366 aa28.98■■■□□ 2.23
TRPT1-201ENST00000317459 TRPM3Q9HCF6 1732 aaPredicted RBP28.97■■■□□ 2.23
TRPT1-201ENST00000317459 PLEKHG5O94827 1062 aa28.97■■■□□ 2.23
TRPT1-201ENST00000317459 HAP1P54257 671 aaPredicted RBP28.97■■■□□ 2.23
TRPT1-201ENST00000317459 NGLY1Q96IV0 654 aa28.97■■■□□ 2.23
TRPT1-201ENST00000317459 CABP1Q9NZU7 370 aa28.94■■■□□ 2.22
TRPT1-201ENST00000317459 CABLES1Q8TDN4 633 aa28.92■■■□□ 2.22
TRPT1-201ENST00000317459 ATAD2Q6PL18 1390 aa28.9■■■□□ 2.22
TRPT1-201ENST00000317459 ALS2Q96Q42 1657 aa28.9■■■□□ 2.22
TRPT1-201ENST00000317459 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
TRPT1-201ENST00000317459 USP47Q96K76 1375 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms