RNA–Protein interactions for RNA: ENST00000315073.9

TRIM41-201, Transcript of tripartite motif containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM41, Length 3,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-201ENST00000315073 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
TRIM41-201ENST00000315073 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
TRIM41-201ENST00000315073 ARID3AQ99856 593 aa18.68■□□□□ 0.58
TRIM41-201ENST00000315073 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
TRIM41-201ENST00000315073 POGZQ7Z3K3 1410 aa18.68■□□□□ 0.58
TRIM41-201ENST00000315073 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
TRIM41-201ENST00000315073 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
TRIM41-201ENST00000315073 TET3O43151 1660 aa18.67■□□□□ 0.58
TRIM41-201ENST00000315073 NPATQ14207 1427 aa18.67■□□□□ 0.58
TRIM41-201ENST00000315073 U2AF1L5P0DN76 240 aaPredicted RBP18.67■□□□□ 0.58
TRIM41-201ENST00000315073 CLCN1P35523 988 aa18.67■□□□□ 0.58
TRIM41-201ENST00000315073 U2AF1Q01081 240 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRIM41-201ENST00000315073 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
TRIM41-201ENST00000315073 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
TRIM41-201ENST00000315073 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
TRIM41-201ENST00000315073 PANK2Q9BZ23 570 aa18.66■□□□□ 0.58
TRIM41-201ENST00000315073 MTHFSP49914 203 aa18.65■□□□□ 0.58
TRIM41-201ENST00000315073 XRCC6P12956 609 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRIM41-201ENST00000315073 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
TRIM41-201ENST00000315073 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
TRIM41-201ENST00000315073 NSD3Q9BZ95 1437 aa18.62■□□□□ 0.57
TRIM41-201ENST00000315073 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
TRIM41-201ENST00000315073 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
TRIM41-201ENST00000315073 C20orf194Q5TEA3 1177 aa18.61■□□□□ 0.57
TRIM41-201ENST00000315073 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
TRIM41-201ENST00000315073 ESPNB1AK53 854 aa18.59■□□□□ 0.57
TRIM41-201ENST00000315073 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
TRIM41-201ENST00000315073 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
TRIM41-201ENST00000315073 RBM10P98175 930 aaKnown RBP18.59■□□□□ 0.57
TRIM41-201ENST00000315073 DUSP27Q5VZP5 1158 aa18.59■□□□□ 0.57
TRIM41-201ENST00000315073 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
TRIM41-201ENST00000315073 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.57
TRIM41-201ENST00000315073 EFCAB6Q5THR3 1501 aa18.58■□□□□ 0.57
TRIM41-201ENST00000315073 E9PSI1 815 aa18.58■□□□□ 0.57
TRIM41-201ENST00000315073 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
TRIM41-201ENST00000315073 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.56
TRIM41-201ENST00000315073 KIF1BO60333 1816 aa18.58■□□□□ 0.56
TRIM41-201ENST00000315073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM41-201ENST00000315073 HDGFL2Q7Z4V5 671 aaPredicted RBP18.57■□□□□ 0.56
TRIM41-201ENST00000315073 LAMC1P11047 1609 aa18.56■□□□□ 0.56
TRIM41-201ENST00000315073 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
TRIM41-201ENST00000315073 TCP11L2Q8N4U5 519 aa18.56■□□□□ 0.56
TRIM41-201ENST00000315073 YEATS2Q9ULM3 1422 aa18.56■□□□□ 0.56
TRIM41-201ENST00000315073 BCAR3O75815 825 aa18.56■□□□□ 0.56
TRIM41-201ENST00000315073 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
TRIM41-201ENST00000315073 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
TRIM41-201ENST00000315073 CEP152O94986 1710 aa18.55■□□□□ 0.56
TRIM41-201ENST00000315073 RNF17Q9BXT8 1623 aaKnown RBP18.55■□□□□ 0.56
TRIM41-201ENST00000315073 MAPK8IP3Q9UPT6 1336 aa18.54■□□□□ 0.56
TRIM41-201ENST00000315073 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
TRIM41-201ENST00000315073 FAM13BQ9NYF5 915 aa18.54■□□□□ 0.56
TRIM41-201ENST00000315073 MRE11P49959 708 aa18.54■□□□□ 0.56
TRIM41-201ENST00000315073 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
TRIM41-201ENST00000315073 TPM2P07951 284 aa18.54■□□□□ 0.56
TRIM41-201ENST00000315073 BLMP54132 1417 aaPredicted RBP18.53■□□□□ 0.56
TRIM41-201ENST00000315073 MYOM2P54296 1465 aa18.53■□□□□ 0.56
TRIM41-201ENST00000315073 MAP3K4Q9Y6R4 1608 aa18.53■□□□□ 0.56
TRIM41-201ENST00000315073 NEO1Q92859 1461 aa18.52■□□□□ 0.56
TRIM41-201ENST00000315073 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
TRIM41-201ENST00000315073 DEPDC5O75140 1603 aa18.52■□□□□ 0.55
TRIM41-201ENST00000315073 PPRC1Q5VV67 1664 aaKnown RBP18.52■□□□□ 0.55
TRIM41-201ENST00000315073 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.55
TRIM41-201ENST00000315073 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
TRIM41-201ENST00000315073 KIAA1211Q6ZU35 1233 aa18.51■□□□□ 0.55
TRIM41-201ENST00000315073 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
TRIM41-201ENST00000315073 TRAK2O60296 914 aa18.5■□□□□ 0.55
TRIM41-201ENST00000315073 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
TRIM41-201ENST00000315073 WAPLQ7Z5K2 1190 aa18.5■□□□□ 0.55
TRIM41-201ENST00000315073 CLUAP1Q96AJ1 413 aa18.5■□□□□ 0.55
TRIM41-201ENST00000315073 CABP1Q9NZU7 370 aa18.5■□□□□ 0.55
TRIM41-201ENST00000315073 CDK19Q9BWU1 502 aa18.5■□□□□ 0.55
TRIM41-201ENST00000315073 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
TRIM41-201ENST00000315073 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
TRIM41-201ENST00000315073 SYNMO15061 1565 aa18.48■□□□□ 0.55
TRIM41-201ENST00000315073 CFAP74Q9C0B2 1584 aa18.48■□□□□ 0.55
TRIM41-201ENST00000315073 MSNP26038 577 aaKnown RBP18.48■□□□□ 0.55
TRIM41-201ENST00000315073 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
TRIM41-201ENST00000315073 NUTM2FA1L443 756 aa18.48■□□□□ 0.55
TRIM41-201ENST00000315073 ABCA6Q8N139 1617 aa18.48■□□□□ 0.55
TRIM41-201ENST00000315073 GRPEL1Q9HAV7 217 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 ABCC3O15438 1527 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 MCM4P33991 863 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 MROH1Q8NDA8 1641 aa18.47■□□□□ 0.55
TRIM41-201ENST00000315073 PANK1Q8TE04 598 aa18.46■□□□□ 0.54
TRIM41-201ENST00000315073 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
TRIM41-201ENST00000315073 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
TRIM41-201ENST00000315073 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
TRIM41-201ENST00000315073 TXNDC2Q86VQ3 553 aa18.44■□□□□ 0.54
TRIM41-201ENST00000315073 FTSJ3Q8IY81 847 aaKnown RBP18.44■□□□□ 0.54
TRIM41-201ENST00000315073 INSRP06213 1382 aa18.43■□□□□ 0.54
TRIM41-201ENST00000315073 SOX12O15370 315 aa18.42■□□□□ 0.54
TRIM41-201ENST00000315073 LMTK2Q8IWU2 1503 aa18.42■□□□□ 0.54
TRIM41-201ENST00000315073 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
TRIM41-201ENST00000315073 FBLN1P23142 703 aa18.41■□□□□ 0.54
TRIM41-201ENST00000315073 DIAPH1O60610 1272 aaKnown RBP18.41■□□□□ 0.54
TRIM41-201ENST00000315073 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
TRIM41-201ENST00000315073 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms