RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 FMN2Q9NZ56 1722 aa26.82■■□□□ 1.88
RPA2-201ENST00000313433 KDM2AQ9Y2K7 1162 aa26.8■■□□□ 1.88
RPA2-201ENST00000313433 DLC1Q96QB1 1528 aa26.8■■□□□ 1.88
RPA2-201ENST00000313433 JCADQ9P266 1359 aa26.77■■□□□ 1.88
RPA2-201ENST00000313433 DDX17Q92841 729 aaKnown RBP26.77■■□□□ 1.88
RPA2-201ENST00000313433 LRP6O75581 1613 aa26.76■■□□□ 1.87
RPA2-201ENST00000313433 ARHGEF28Q8N1W1 1705 aaKnown RBP26.75■■□□□ 1.87
RPA2-201ENST00000313433 RGPD8O14715 1765 aaPredicted RBP26.74■■□□□ 1.87
RPA2-201ENST00000313433 KIAA1210Q9ULL0 1709 aa26.74■■□□□ 1.87
RPA2-201ENST00000313433 SIRT1Q96EB6 747 aa26.74■■□□□ 1.87
RPA2-201ENST00000313433 ORAI2Q96SN7 254 aa26.73■■□□□ 1.87
RPA2-201ENST00000313433 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
RPA2-201ENST00000313433 RGS17Q9UGC6 210 aaPredicted RBP26.71■■□□□ 1.87
RPA2-201ENST00000313433 USP32Q8NFA0 1604 aa26.7■■□□□ 1.86
RPA2-201ENST00000313433 STAC3Q96MF2 364 aa26.69■■□□□ 1.86
RPA2-201ENST00000313433 SIN3AQ96ST3 1273 aa26.69■■□□□ 1.86
RPA2-201ENST00000313433 PRAM1Q96QH2 718 aa26.68■■□□□ 1.86
RPA2-201ENST00000313433 PXDNQ92626 1479 aa26.65■■□□□ 1.86
RPA2-201ENST00000313433 SAFB2Q14151 953 aaKnown RBP eCLIP26.64■■□□□ 1.86
RPA2-201ENST00000313433 TRAK1Q9UPV9 953 aa26.64■■□□□ 1.86
RPA2-201ENST00000313433 NUTM2FA1L443 756 aa26.63■■□□□ 1.85
RPA2-201ENST00000313433 KIF1AQ12756 1690 aa26.63■■□□□ 1.85
RPA2-201ENST00000313433 SOS2Q07890 1332 aaPredicted RBP26.63■■□□□ 1.85
RPA2-201ENST00000313433 PNPLA6Q8IY17 1366 aa26.62■■□□□ 1.85
RPA2-201ENST00000313433 PHF23Q9BUL5 403 aaPredicted RBP26.62■■□□□ 1.85
RPA2-201ENST00000313433 PCGF6Q9BYE7 350 aa26.62■■□□□ 1.85
RPA2-201ENST00000313433 SPATA31A6Q5VVP1 1343 aa26.62■■□□□ 1.85
RPA2-201ENST00000313433 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
RPA2-201ENST00000313433 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
RPA2-201ENST00000313433 COL22A1Q8NFW1 1626 aaPredicted RBP26.6■■□□□ 1.85
RPA2-201ENST00000313433 ESCO1Q5FWF5 840 aa26.59■■□□□ 1.85
RPA2-201ENST00000313433 NBPF1Q3BBV0 1214 aa26.58■■□□□ 1.85
RPA2-201ENST00000313433 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
RPA2-201ENST00000313433 POGKQ9P215 609 aa26.56■■□□□ 1.84
RPA2-201ENST00000313433 HIRIP3Q9BW71 556 aaPredicted RBP26.54■■□□□ 1.84
RPA2-201ENST00000313433 NEUROD1Q13562 356 aa26.53■■□□□ 1.84
RPA2-201ENST00000313433 POTEAQ6S8J7 498 aa26.53■■□□□ 1.84
RPA2-201ENST00000313433 MINK1Q8N4C8 1332 aaPredicted RBP26.53■■□□□ 1.84
RPA2-201ENST00000313433 TULP4Q9NRJ4 1543 aa26.53■■□□□ 1.84
RPA2-201ENST00000313433 FOXO3O43524 673 aa26.52■■□□□ 1.84
RPA2-201ENST00000313433 XPCQ01831 940 aaPredicted RBP26.52■■□□□ 1.84
RPA2-201ENST00000313433 ANKARQ7Z5J8 1434 aa26.52■■□□□ 1.84
RPA2-201ENST00000313433 NPHP3Q7Z494 1330 aa26.51■■□□□ 1.83
RPA2-201ENST00000313433 PRR36Q9H6K5 1346 aa26.51■■□□□ 1.83
RPA2-201ENST00000313433 SOCS7O14512 581 aa26.5■■□□□ 1.83
RPA2-201ENST00000313433 NUTM2BA6NNL0 878 aaPredicted RBP26.49■■□□□ 1.83
RPA2-201ENST00000313433 NUTM2EB1AL46 878 aaPredicted RBP26.49■■□□□ 1.83
RPA2-201ENST00000313433 NUTM2AQ8IVF1 878 aaPredicted RBP26.49■■□□□ 1.83
RPA2-201ENST00000313433 TRPM3Q9HCF6 1732 aaPredicted RBP26.48■■□□□ 1.83
RPA2-201ENST00000313433 TOPAZ1Q8N9V7 1692 aa26.47■■□□□ 1.83
RPA2-201ENST00000313433 QRICH2Q9H0J4 1663 aa26.47■■□□□ 1.83
RPA2-201ENST00000313433 ATP7BP35670 1465 aa26.47■■□□□ 1.83
RPA2-201ENST00000313433 MARF1Q9Y4F3 1742 aaKnown RBP26.46■■□□□ 1.83
RPA2-201ENST00000313433 PHF8Q9UPP1 1060 aa26.46■■□□□ 1.83
RPA2-201ENST00000313433 WASLO00401 505 aaPredicted RBP26.45■■□□□ 1.82
RPA2-201ENST00000313433 ITSN1Q15811 1721 aa26.45■■□□□ 1.82
RPA2-201ENST00000313433 ABCA3Q99758 1704 aa26.44■■□□□ 1.82
RPA2-201ENST00000313433 NBPF8Q3BBV2 869 aa26.43■■□□□ 1.82
RPA2-201ENST00000313433 MEX3CQ5U5Q3 659 aaKnown RBP26.42■■□□□ 1.82
RPA2-201ENST00000313433 ALS2Q96Q42 1657 aa26.41■■□□□ 1.82
RPA2-201ENST00000313433 SPATA31A3Q5VYP0 1347 aa26.39■■□□□ 1.82
RPA2-201ENST00000313433 PMFBP1Q8TBY8 1022 aa26.39■■□□□ 1.82
RPA2-201ENST00000313433 TNS3Q68CZ2 1445 aa26.39■■□□□ 1.81
RPA2-201ENST00000313433 EIF3AQ14152 1382 aaKnown RBP26.38■■□□□ 1.81
RPA2-201ENST00000313433 KRT28Q7Z3Y7 464 aa26.38■■□□□ 1.81
RPA2-201ENST00000313433 AFF2P51816 1311 aa26.38■■□□□ 1.81
RPA2-201ENST00000313433 CRYBG1Q9Y4K1 1723 aa26.36■■□□□ 1.81
RPA2-201ENST00000313433 GPRASP1Q5JY77 1395 aa26.35■■□□□ 1.81
RPA2-201ENST00000313433 ADAMTS2O95450 1211 aa26.35■■□□□ 1.81
RPA2-201ENST00000313433 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
RPA2-201ENST00000313433 C8orf37Q96NL8 207 aa26.34■■□□□ 1.81
RPA2-201ENST00000313433 CDK19Q9BWU1 502 aa26.34■■□□□ 1.81
RPA2-201ENST00000313433 CENPJQ9HC77 1338 aaPredicted RBP26.34■■□□□ 1.81
RPA2-201ENST00000313433 ROCK2O75116 1388 aaKnown RBP26.33■■□□□ 1.81
RPA2-201ENST00000313433 RALGAPBQ86X10 1494 aa26.32■■□□□ 1.8
RPA2-201ENST00000313433 NUDT16Q96DE0 195 aaKnown RBP26.32■■□□□ 1.8
RPA2-201ENST00000313433 TONSLQ96HA7 1378 aa26.31■■□□□ 1.8
RPA2-201ENST00000313433 ZNF772Q68DY9 489 aaPredicted RBP26.3■■□□□ 1.8
RPA2-201ENST00000313433 PSME1Q06323 249 aa26.27■■□□□ 1.8
RPA2-201ENST00000313433 POLR3AO14802 1390 aaPredicted RBP26.26■■□□□ 1.79
RPA2-201ENST00000313433 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
RPA2-201ENST00000313433 PLCH1Q4KWH8 1693 aa26.25■■□□□ 1.79
RPA2-201ENST00000313433 BCL9LQ86UU0 1499 aa26.24■■□□□ 1.79
RPA2-201ENST00000313433 CABLES1Q8TDN4 633 aa26.24■■□□□ 1.79
RPA2-201ENST00000313433 ARHGEF10O15013 1369 aa26.23■■□□□ 1.79
RPA2-201ENST00000313433 FNBP4Q8N3X1 1017 aaPredicted RBP26.23■■□□□ 1.79
RPA2-201ENST00000313433 NGLY1Q96IV0 654 aa26.23■■□□□ 1.79
RPA2-201ENST00000313433 CABP2Q9NPB3 220 aa26.22■■□□□ 1.79
RPA2-201ENST00000313433 SLIT2O94813 1529 aa26.21■■□□□ 1.79
RPA2-201ENST00000313433 NGDNQ8NEJ9 315 aaKnown RBP26.21■■□□□ 1.79
RPA2-201ENST00000313433 CDK12Q9NYV4 1490 aaPredicted RBP26.21■■□□□ 1.79
RPA2-201ENST00000313433 ATRNO75882 1429 aa26.21■■□□□ 1.79
RPA2-201ENST00000313433 PPIP5K1Q6PFW1 1433 aa26.21■■□□□ 1.79
RPA2-201ENST00000313433 PHRF1Q9P1Y6 1649 aaKnown RBP26.21■■□□□ 1.79
RPA2-201ENST00000313433 PLEKHG3A1L390 1219 aa26.2■■□□□ 1.78
RPA2-201ENST00000313433 CCDC61Q9Y6R9 512 aa26.2■■□□□ 1.78
RPA2-201ENST00000313433 ACEP12821 1306 aa26.19■■□□□ 1.78
RPA2-201ENST00000313433 RGS12O14924 1447 aa26.18■■□□□ 1.78
RPA2-201ENST00000313433 QTRT2Q9H974 415 aaKnown RBP26.18■■□□□ 1.78
RPA2-201ENST00000313433 USP21Q9UK80 565 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms