RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 SHANK2Q9UPX8 1470 aa18.24■□□□□ 0.51
SCUBE2-201ENST00000309263 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
SCUBE2-201ENST00000309263 E9PCH4 1651 aa18.23■□□□□ 0.51
SCUBE2-201ENST00000309263 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
SCUBE2-201ENST00000309263 TRPM1Q7Z4N2 1603 aa18.22■□□□□ 0.51
SCUBE2-201ENST00000309263 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
SCUBE2-201ENST00000309263 TRAK2O60296 914 aa18.22■□□□□ 0.51
SCUBE2-201ENST00000309263 MCM4P33991 863 aa18.22■□□□□ 0.51
SCUBE2-201ENST00000309263 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
SCUBE2-201ENST00000309263 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
SCUBE2-201ENST00000309263 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
SCUBE2-201ENST00000309263 NEO1Q92859 1461 aa18.21■□□□□ 0.51
SCUBE2-201ENST00000309263 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
SCUBE2-201ENST00000309263 KIF3BO15066 747 aa18.2■□□□□ 0.5
SCUBE2-201ENST00000309263 MTHFSP49914 203 aa18.2■□□□□ 0.5
SCUBE2-201ENST00000309263 CROCC2H7BZ55 1655 aa18.2■□□□□ 0.5
SCUBE2-201ENST00000309263 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
SCUBE2-201ENST00000309263 MAP3K4Q9Y6R4 1608 aa18.19■□□□□ 0.5
SCUBE2-201ENST00000309263 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
SCUBE2-201ENST00000309263 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
SCUBE2-201ENST00000309263 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
SCUBE2-201ENST00000309263 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
SCUBE2-201ENST00000309263 ZNF518AQ6AHZ1 1483 aa18.17■□□□□ 0.5
SCUBE2-201ENST00000309263 ANTXR1Q9H6X2 564 aa18.17■□□□□ 0.5
SCUBE2-201ENST00000309263 ASXL1Q8IXJ9 1541 aa18.17■□□□□ 0.5
SCUBE2-201ENST00000309263 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
SCUBE2-201ENST00000309263 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
SCUBE2-201ENST00000309263 VSIG10Q8N0Z9 540 aa18.16■□□□□ 0.5
SCUBE2-201ENST00000309263 LNPKQ9C0E8 428 aa18.16■□□□□ 0.5
SCUBE2-201ENST00000309263 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
SCUBE2-201ENST00000309263 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
SCUBE2-201ENST00000309263 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
SCUBE2-201ENST00000309263 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
SCUBE2-201ENST00000309263 INSRP06213 1382 aa18.15■□□□□ 0.5
SCUBE2-201ENST00000309263 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
SCUBE2-201ENST00000309263 POGZQ7Z3K3 1410 aa18.15■□□□□ 0.5
SCUBE2-201ENST00000309263 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
SCUBE2-201ENST00000309263 PIK3C2GO75747 1445 aa18.12■□□□□ 0.49
SCUBE2-201ENST00000309263 EXOSC9Q06265 439 aaKnown RBP18.12■□□□□ 0.49
SCUBE2-201ENST00000309263 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
SCUBE2-201ENST00000309263 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 GLIPR1L2Q4G1C9 344 aa18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 KIF13AQ9H1H9 1805 aa18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 STK26Q9P289 416 aa18.11■□□□□ 0.49
SCUBE2-201ENST00000309263 ATP7AQ04656 1500 aa18.1■□□□□ 0.49
SCUBE2-201ENST00000309263 GGT6Q6P531 493 aa18.1■□□□□ 0.49
SCUBE2-201ENST00000309263 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
SCUBE2-201ENST00000309263 GRPEL1Q9HAV7 217 aa18.09■□□□□ 0.49
SCUBE2-201ENST00000309263 NSD3Q9BZ95 1437 aa18.08■□□□□ 0.49
SCUBE2-201ENST00000309263 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
SCUBE2-201ENST00000309263 ELL2O00472 640 aaPredicted RBP18.08■□□□□ 0.49
SCUBE2-201ENST00000309263 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
SCUBE2-201ENST00000309263 C1orf115Q9H7X2 142 aa18.07■□□□□ 0.48
SCUBE2-201ENST00000309263 MRE11P49959 708 aa18.07■□□□□ 0.48
SCUBE2-201ENST00000309263 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
SCUBE2-201ENST00000309263 TRIM27P14373 513 aa18.06■□□□□ 0.48
SCUBE2-201ENST00000309263 SSH1Q8WYL5 1049 aa18.06■□□□□ 0.48
SCUBE2-201ENST00000309263 PLXNC1O60486 1568 aa18.05■□□□□ 0.48
SCUBE2-201ENST00000309263 ARID3AQ99856 593 aa18.05■□□□□ 0.48
SCUBE2-201ENST00000309263 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
SCUBE2-201ENST00000309263 GGNBP2Q9H3C7 697 aa18.05■□□□□ 0.48
SCUBE2-201ENST00000309263 MLH3Q9UHC1 1453 aa18.04■□□□□ 0.48
SCUBE2-201ENST00000309263 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
SCUBE2-201ENST00000309263 SOX12O15370 315 aa18.04■□□□□ 0.48
SCUBE2-201ENST00000309263 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
SCUBE2-201ENST00000309263 TMEM57Q8N5G2 664 aa18.04■□□□□ 0.48
SCUBE2-201ENST00000309263 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
SCUBE2-201ENST00000309263 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
SCUBE2-201ENST00000309263 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
SCUBE2-201ENST00000309263 ESPNB1AK53 854 aa18.03■□□□□ 0.48
SCUBE2-201ENST00000309263 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
SCUBE2-201ENST00000309263 WDR63Q8IWG1 891 aa18.03■□□□□ 0.48
SCUBE2-201ENST00000309263 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
SCUBE2-201ENST00000309263 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
SCUBE2-201ENST00000309263 APBB1O00213 710 aa18.02■□□□□ 0.48
SCUBE2-201ENST00000309263 NINLQ9Y2I6 1382 aa18.02■□□□□ 0.47
SCUBE2-201ENST00000309263 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.47
SCUBE2-201ENST00000309263 DDX19BQ9UMR2 479 aa18.02■□□□□ 0.47
SCUBE2-201ENST00000309263 KANK1Q14678 1352 aa18.02■□□□□ 0.47
SCUBE2-201ENST00000309263 ANP32BQ92688 251 aaKnown RBP18.01■□□□□ 0.47
SCUBE2-201ENST00000309263 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
SCUBE2-201ENST00000309263 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
SCUBE2-201ENST00000309263 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
SCUBE2-201ENST00000309263 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
SCUBE2-201ENST00000309263 KIDINS220Q9ULH0 1771 aa18■□□□□ 0.47
SCUBE2-201ENST00000309263 CLCN1P35523 988 aa18■□□□□ 0.47
SCUBE2-201ENST00000309263 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
SCUBE2-201ENST00000309263 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
SCUBE2-201ENST00000309263 RIPK4P57078 832 aa17.99■□□□□ 0.47
SCUBE2-201ENST00000309263 FSD2A1L4K1 749 aa17.99■□□□□ 0.47
SCUBE2-201ENST00000309263 GAS2L3Q86XJ1 694 aa17.98■□□□□ 0.47
SCUBE2-201ENST00000309263 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
SCUBE2-201ENST00000309263 DDX49Q9Y6V7 483 aaKnown RBP17.98■□□□□ 0.47
SCUBE2-201ENST00000309263 POLR3AO14802 1390 aaPredicted RBP17.97■□□□□ 0.47
SCUBE2-201ENST00000309263 RICTORQ6R327 1708 aa17.97■□□□□ 0.47
SCUBE2-201ENST00000309263 FOXD4L5Q5VV16 416 aaPredicted RBP17.97■□□□□ 0.47
SCUBE2-201ENST00000309263 FOXD4L4Q8WXT5 416 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms