RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 GBP4Q96PP9 640 aa14.21□□□□□ -0.13
PCDHGC3-201ENST00000308177 DISP3Q9P2K9 1392 aa14.21□□□□□ -0.13
PCDHGC3-201ENST00000308177 RALGAPBQ86X10 1494 aa14.21□□□□□ -0.13
PCDHGC3-201ENST00000308177 NOS1P29475 1434 aa14.21□□□□□ -0.13
PCDHGC3-201ENST00000308177 SHANK2Q9UPX8 1470 aa14.21□□□□□ -0.14
PCDHGC3-201ENST00000308177 NECTIN2Q92692 538 aa14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 SLC4A3P48751 1232 aa14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 ZRSR1Q15695 479 aaKnown RBP14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 CHMP3Q9Y3E7 222 aa14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 ABTB2Q8N961 1025 aa14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 WDR7Q9Y4E6 1490 aa14.2□□□□□ -0.14
PCDHGC3-201ENST00000308177 PTMAP06454 111 aaKnown RBP14.19□□□□□ -0.14
PCDHGC3-201ENST00000308177 FKBP5Q13451 457 aaPredicted RBP14.19□□□□□ -0.14
PCDHGC3-201ENST00000308177 CCDC61Q9Y6R9 512 aa14.19□□□□□ -0.14
PCDHGC3-201ENST00000308177 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
PCDHGC3-201ENST00000308177 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
PCDHGC3-201ENST00000308177 POGZQ7Z3K3 1410 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 PRAG1Q86YV5 1406 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 SLFN5Q08AF3 891 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 ATF3P18847 181 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 WWC1Q8IX03 1113 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 NUDT16Q96DE0 195 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
PCDHGC3-201ENST00000308177 L1TD1Q5T7N2 865 aaKnown RBP14.16□□□□□ -0.14
PCDHGC3-201ENST00000308177 PZPP20742 1482 aa14.16□□□□□ -0.14
PCDHGC3-201ENST00000308177 GPRASP1Q5JY77 1395 aa14.16□□□□□ -0.14
PCDHGC3-201ENST00000308177 GOLGA6L4A6NEF3 574 aa14.16□□□□□ -0.14
PCDHGC3-201ENST00000308177 ESCO1Q5FWF5 840 aa14.16□□□□□ -0.14
PCDHGC3-201ENST00000308177 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
PCDHGC3-201ENST00000308177 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 ABCC2Q92887 1545 aa14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 A2MP01023 1474 aa14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 CT47B1P0C2W7 299 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 TWISTNBQ3B726 338 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 GORABQ5T7V8 394 aa14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 CCDC9Q9Y3X0 531 aaKnown RBP14.15□□□□□ -0.14
PCDHGC3-201ENST00000308177 FCHSD2O94868 740 aa14.15□□□□□ -0.15
PCDHGC3-201ENST00000308177 RILPL2Q969X0 211 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 GZF1Q9H116 711 aaPredicted RBP14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 ZNF518AQ6AHZ1 1483 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 ST18O60284 1047 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 TAF7LQ5H9L4 462 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 C9orf78Q9NZ63 289 aaPredicted RBP14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 RRS1Q15050 365 aaKnown RBP14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
PCDHGC3-201ENST00000308177 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 PTMSP20962 102 aa14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 EVA1CP58658 441 aa14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 NEXNQ0ZGT2 675 aa14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 TMPOP42166 694 aaKnown RBP14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 ANKLE2Q86XL3 938 aa14.13□□□□□ -0.15
PCDHGC3-201ENST00000308177 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
PCDHGC3-201ENST00000308177 NOB1Q9ULX3 412 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-201ENST00000308177 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-201ENST00000308177 NLRP2Q9NX02 1062 aa14.12□□□□□ -0.15
PCDHGC3-201ENST00000308177 TESK2Q96S53 571 aa14.11□□□□□ -0.15
PCDHGC3-201ENST00000308177 NINLQ9Y2I6 1382 aa14.11□□□□□ -0.15
PCDHGC3-201ENST00000308177 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-201ENST00000308177 NOL8Q76FK4 1167 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-201ENST00000308177 ATF7IPQ6VMQ6 1270 aa14.1□□□□□ -0.15
PCDHGC3-201ENST00000308177 PDZRN3Q9UPQ7 1066 aa14.1□□□□□ -0.15
PCDHGC3-201ENST00000308177 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
PCDHGC3-201ENST00000308177 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
PCDHGC3-201ENST00000308177 REC8O95072 547 aa14.09□□□□□ -0.15
PCDHGC3-201ENST00000308177 WASLO00401 505 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-201ENST00000308177 NFE2L2Q16236 605 aa14.09□□□□□ -0.15
PCDHGC3-201ENST00000308177 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-201ENST00000308177 CCDC30Q5VVM6 783 aa14.08□□□□□ -0.16
PCDHGC3-201ENST00000308177 MVPQ14764 893 aaKnown RBP14.07□□□□□ -0.16
PCDHGC3-201ENST00000308177 NME9Q86XW9 330 aa14.07□□□□□ -0.16
PCDHGC3-201ENST00000308177 CEBPAP49715 358 aaPredicted RBP14.07□□□□□ -0.16
PCDHGC3-201ENST00000308177 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
PCDHGC3-201ENST00000308177 C22orf23Q9BZE7 217 aa14.06□□□□□ -0.16
PCDHGC3-201ENST00000308177 ZNF428Q96B54 188 aa14.06□□□□□ -0.16
PCDHGC3-201ENST00000308177 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
PCDHGC3-201ENST00000308177 DUSP27Q5VZP5 1158 aa14.06□□□□□ -0.16
PCDHGC3-201ENST00000308177 NSD2O96028 1365 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 DNTTIP2Q5QJE6 756 aaKnown RBP14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 TEX14Q8IWB6 1497 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 UBTFL1P0CB47 393 aaPredicted RBP14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 C1orf115Q9H7X2 142 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 PARD3Q8TEW0 1356 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 GNAI3P08754 354 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 C20orf194Q5TEA3 1177 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 DIAPH3Q9NSV4 1193 aa14.05□□□□□ -0.16
PCDHGC3-201ENST00000308177 EMILIN1Q9Y6C2 1016 aa14.04□□□□□ -0.16
PCDHGC3-201ENST00000308177 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
PCDHGC3-201ENST00000308177 IFIT2P09913 472 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms