RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 SIRT1Q96EB6 747 aa30.2■■■□□ 2.43
MRPL39-201ENST00000307301 SIN3AQ96ST3 1273 aa30.2■■■□□ 2.43
MRPL39-201ENST00000307301 DLC1Q96QB1 1528 aa30.2■■■□□ 2.42
MRPL39-201ENST00000307301 KIAA1210Q9ULL0 1709 aa30.16■■■□□ 2.42
MRPL39-201ENST00000307301 FMN2Q9NZ56 1722 aa30.16■■■□□ 2.42
MRPL39-201ENST00000307301 PRAM1Q96QH2 718 aa30.15■■■□□ 2.42
MRPL39-201ENST00000307301 JCADQ9P266 1359 aa30.14■■■□□ 2.41
MRPL39-201ENST00000307301 NEUROD1Q13562 356 aa30.13■■■□□ 2.41
MRPL39-201ENST00000307301 ORAI2Q96SN7 254 aa30.13■■■□□ 2.41
MRPL39-201ENST00000307301 TRAK1Q9UPV9 953 aa30.13■■■□□ 2.41
MRPL39-201ENST00000307301 SAFB2Q14151 953 aaKnown RBP eCLIP30.12■■■□□ 2.41
MRPL39-201ENST00000307301 DDX17Q92841 729 aaKnown RBP30.12■■■□□ 2.41
MRPL39-201ENST00000307301 SHPRHQ149N8 1683 aa30.11■■■□□ 2.41
MRPL39-201ENST00000307301 ARHGEF28Q8N1W1 1705 aaKnown RBP30.11■■■□□ 2.41
MRPL39-201ENST00000307301 L3MBTL2Q969R5 705 aa30.11■■■□□ 2.41
MRPL39-201ENST00000307301 POGKQ9P215 609 aa30.1■■■□□ 2.41
MRPL39-201ENST00000307301 NUTM2FA1L443 756 aa30.08■■■□□ 2.41
MRPL39-201ENST00000307301 RGPD8O14715 1765 aaPredicted RBP30.07■■■□□ 2.4
MRPL39-201ENST00000307301 ILDR2Q71H61 639 aa30.06■■■□□ 2.4
MRPL39-201ENST00000307301 ADGRB2O60241 1585 aa30.06■■■□□ 2.4
MRPL39-201ENST00000307301 PHF23Q9BUL5 403 aaPredicted RBP30.05■■■□□ 2.4
MRPL39-201ENST00000307301 ESCO1Q5FWF5 840 aa30.04■■■□□ 2.4
MRPL39-201ENST00000307301 NBPF1Q3BBV0 1214 aa30.02■■■□□ 2.4
MRPL39-201ENST00000307301 SPATA31A6Q5VVP1 1343 aa29.99■■■□□ 2.39
MRPL39-201ENST00000307301 KIF1AQ12756 1690 aa29.99■■■□□ 2.39
MRPL39-201ENST00000307301 LRRC59Q96AG4 307 aaKnown RBP29.99■■■□□ 2.39
MRPL39-201ENST00000307301 LRP6O75581 1613 aa29.99■■■□□ 2.39
MRPL39-201ENST00000307301 TRPM1Q7Z4N2 1603 aa29.99■■■□□ 2.39
MRPL39-201ENST00000307301 MINK1Q8N4C8 1332 aaPredicted RBP29.98■■■□□ 2.39
MRPL39-201ENST00000307301 USP32Q8NFA0 1604 aa29.98■■■□□ 2.39
MRPL39-201ENST00000307301 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
MRPL39-201ENST00000307301 SOS2Q07890 1332 aaPredicted RBP29.97■■■□□ 2.39
MRPL39-201ENST00000307301 NPHP3Q7Z494 1330 aa29.95■■■□□ 2.38
MRPL39-201ENST00000307301 PXDNQ92626 1479 aa29.94■■■□□ 2.38
MRPL39-201ENST00000307301 PNPLA6Q8IY17 1366 aa29.94■■■□□ 2.38
MRPL39-201ENST00000307301 FOXO3O43524 673 aa29.93■■■□□ 2.38
MRPL39-201ENST00000307301 RGS17Q9UGC6 210 aaPredicted RBP29.92■■■□□ 2.38
MRPL39-201ENST00000307301 ANKARQ7Z5J8 1434 aa29.91■■■□□ 2.38
MRPL39-201ENST00000307301 XPCQ01831 940 aaPredicted RBP29.9■■■□□ 2.38
MRPL39-201ENST00000307301 NUTM2BA6NNL0 878 aaPredicted RBP29.89■■■□□ 2.38
MRPL39-201ENST00000307301 NUTM2EB1AL46 878 aaPredicted RBP29.89■■■□□ 2.38
MRPL39-201ENST00000307301 NUTM2AQ8IVF1 878 aaPredicted RBP29.89■■■□□ 2.38
MRPL39-201ENST00000307301 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
MRPL39-201ENST00000307301 TULP4Q9NRJ4 1543 aa29.89■■■□□ 2.38
MRPL39-201ENST00000307301 TONSLQ96HA7 1378 aa29.89■■■□□ 2.37
MRPL39-201ENST00000307301 WASLO00401 505 aaPredicted RBP29.88■■■□□ 2.37
MRPL39-201ENST00000307301 PHF8Q9UPP1 1060 aa29.88■■■□□ 2.37
MRPL39-201ENST00000307301 MEX3CQ5U5Q3 659 aaKnown RBP29.86■■■□□ 2.37
MRPL39-201ENST00000307301 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
MRPL39-201ENST00000307301 COL22A1Q8NFW1 1626 aaPredicted RBP29.85■■■□□ 2.37
MRPL39-201ENST00000307301 QRICH2Q9H0J4 1663 aa29.85■■■□□ 2.37
MRPL39-201ENST00000307301 NBPF8Q3BBV2 869 aa29.85■■■□□ 2.37
MRPL39-201ENST00000307301 PRR36Q9H6K5 1346 aa29.85■■■□□ 2.37
MRPL39-201ENST00000307301 ROCK2O75116 1388 aaKnown RBP29.83■■■□□ 2.37
MRPL39-201ENST00000307301 ITSN1Q15811 1721 aa29.82■■■□□ 2.36
MRPL39-201ENST00000307301 PMFBP1Q8TBY8 1022 aa29.81■■■□□ 2.36
MRPL39-201ENST00000307301 CENPJQ9HC77 1338 aaPredicted RBP29.8■■■□□ 2.36
MRPL39-201ENST00000307301 KRT28Q7Z3Y7 464 aa29.8■■■□□ 2.36
MRPL39-201ENST00000307301 ATP7BP35670 1465 aa29.79■■■□□ 2.36
MRPL39-201ENST00000307301 CDK19Q9BWU1 502 aa29.78■■■□□ 2.36
MRPL39-201ENST00000307301 POTEAQ6S8J7 498 aa29.77■■■□□ 2.36
MRPL39-201ENST00000307301 TOPAZ1Q8N9V7 1692 aa29.76■■■□□ 2.36
MRPL39-201ENST00000307301 SPATA31A3Q5VYP0 1347 aa29.75■■■□□ 2.35
MRPL39-201ENST00000307301 PSME1Q06323 249 aa29.74■■■□□ 2.35
MRPL39-201ENST00000307301 NUDT16Q96DE0 195 aaKnown RBP29.74■■■□□ 2.35
MRPL39-201ENST00000307301 GPRASP1Q5JY77 1395 aa29.74■■■□□ 2.35
MRPL39-201ENST00000307301 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
MRPL39-201ENST00000307301 RALGAPBQ86X10 1494 aa29.73■■■□□ 2.35
MRPL39-201ENST00000307301 TNS3Q68CZ2 1445 aa29.72■■■□□ 2.35
MRPL39-201ENST00000307301 MARF1Q9Y4F3 1742 aaKnown RBP29.71■■■□□ 2.35
MRPL39-201ENST00000307301 ADAMTS2O95450 1211 aa29.71■■■□□ 2.35
MRPL39-201ENST00000307301 SBNO1A3KN83 1393 aa29.7■■■□□ 2.35
MRPL39-201ENST00000307301 SOCS7O14512 581 aa29.7■■■□□ 2.35
MRPL39-201ENST00000307301 C8orf37Q96NL8 207 aa29.7■■■□□ 2.35
MRPL39-201ENST00000307301 AFF2P51816 1311 aa29.69■■■□□ 2.34
MRPL39-201ENST00000307301 ZNF772Q68DY9 489 aaPredicted RBP29.68■■■□□ 2.34
MRPL39-201ENST00000307301 NGDNQ8NEJ9 315 aaKnown RBP29.67■■■□□ 2.34
MRPL39-201ENST00000307301 ALS2Q96Q42 1657 aa29.66■■■□□ 2.34
MRPL39-201ENST00000307301 SRPK2P78362 688 aaKnown RBP29.66■■■□□ 2.34
MRPL39-201ENST00000307301 CARD11Q9BXL7 1154 aa29.66■■■□□ 2.34
MRPL39-201ENST00000307301 ABCA3Q99758 1704 aa29.65■■■□□ 2.34
MRPL39-201ENST00000307301 CABP2Q9NPB3 220 aa29.64■■■□□ 2.34
MRPL39-201ENST00000307301 CCDC61Q9Y6R9 512 aa29.64■■■□□ 2.34
MRPL39-201ENST00000307301 LMOD2Q6P5Q4 547 aa29.63■■■□□ 2.33
MRPL39-201ENST00000307301 CLSPNQ9HAW4 1339 aa29.63■■■□□ 2.33
MRPL39-201ENST00000307301 NGLY1Q96IV0 654 aa29.62■■■□□ 2.33
MRPL39-201ENST00000307301 ARHGEF10O15013 1369 aa29.62■■■□□ 2.33
MRPL39-201ENST00000307301 PLEKHG5O94827 1062 aa29.59■■■□□ 2.33
MRPL39-201ENST00000307301 EVC2Q86UK5 1308 aa29.59■■■□□ 2.33
MRPL39-201ENST00000307301 POLR3AO14802 1390 aaPredicted RBP29.59■■■□□ 2.33
MRPL39-201ENST00000307301 PPIP5K1Q6PFW1 1433 aa29.59■■■□□ 2.33
MRPL39-201ENST00000307301 PLEKHG3A1L390 1219 aa29.58■■■□□ 2.33
MRPL39-201ENST00000307301 ACEP12821 1306 aa29.58■■■□□ 2.33
MRPL39-201ENST00000307301 CABLES1Q8TDN4 633 aa29.58■■■□□ 2.33
MRPL39-201ENST00000307301 PAK3O75914 559 aaPredicted RBP29.55■■■□□ 2.32
MRPL39-201ENST00000307301 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
MRPL39-201ENST00000307301 HAP1P54257 671 aaPredicted RBP29.54■■■□□ 2.32
MRPL39-201ENST00000307301 SBNO2Q9Y2G9 1366 aa29.53■■■□□ 2.32
MRPL39-201ENST00000307301 FNBP4Q8N3X1 1017 aaPredicted RBP29.53■■■□□ 2.32
MRPL39-201ENST00000307301 CCER1Q8TC90 406 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms