RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
SRGAP2C-201ENST00000304465 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
SRGAP2C-201ENST00000304465 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
SRGAP2C-201ENST00000304465 LAMC1P11047 1609 aa23.21■■□□□ 1.31
SRGAP2C-201ENST00000304465 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
SRGAP2C-201ENST00000304465 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
SRGAP2C-201ENST00000304465 ORAI2Q96SN7 254 aa23.19■■□□□ 1.3
SRGAP2C-201ENST00000304465 DDX17Q92841 729 aaKnown RBP23.18■■□□□ 1.3
SRGAP2C-201ENST00000304465 SIRT1Q96EB6 747 aa23.18■■□□□ 1.3
SRGAP2C-201ENST00000304465 CDC42BPGQ6DT37 1551 aa23.17■■□□□ 1.3
SRGAP2C-201ENST00000304465 KNDC1Q76NI1 1749 aa23.17■■□□□ 1.3
SRGAP2C-201ENST00000304465 ESCO1Q5FWF5 840 aa23.17■■□□□ 1.3
SRGAP2C-201ENST00000304465 PLEKHH1Q9ULM0 1364 aa23.16■■□□□ 1.3
SRGAP2C-201ENST00000304465 POGKQ9P215 609 aa23.16■■□□□ 1.3
SRGAP2C-201ENST00000304465 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
SRGAP2C-201ENST00000304465 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
SRGAP2C-201ENST00000304465 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
SRGAP2C-201ENST00000304465 RGS17Q9UGC6 210 aaPredicted RBP23.15■■□□□ 1.3
SRGAP2C-201ENST00000304465 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
SRGAP2C-201ENST00000304465 NUTM2FA1L443 756 aa23.14■■□□□ 1.29
SRGAP2C-201ENST00000304465 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
SRGAP2C-201ENST00000304465 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
SRGAP2C-201ENST00000304465 SAFB2Q14151 953 aaKnown RBP eCLIP23.12■■□□□ 1.29
SRGAP2C-201ENST00000304465 NPHP3Q7Z494 1330 aa23.11■■□□□ 1.29
SRGAP2C-201ENST00000304465 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
SRGAP2C-201ENST00000304465 LRP6O75581 1613 aa23.09■■□□□ 1.29
SRGAP2C-201ENST00000304465 SOS2Q07890 1332 aaPredicted RBP23.08■■□□□ 1.29
SRGAP2C-201ENST00000304465 FOXO3O43524 673 aa23.07■■□□□ 1.28
SRGAP2C-201ENST00000304465 DLC1Q96QB1 1528 aa23.07■■□□□ 1.28
SRGAP2C-201ENST00000304465 PNPLA6Q8IY17 1366 aa23.07■■□□□ 1.28
SRGAP2C-201ENST00000304465 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
SRGAP2C-201ENST00000304465 POTEAQ6S8J7 498 aa23.06■■□□□ 1.28
SRGAP2C-201ENST00000304465 ZNF772Q68DY9 489 aaPredicted RBP23.05■■□□□ 1.28
SRGAP2C-201ENST00000304465 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
SRGAP2C-201ENST00000304465 XPCQ01831 940 aaPredicted RBP23.02■■□□□ 1.28
SRGAP2C-201ENST00000304465 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
SRGAP2C-201ENST00000304465 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
SRGAP2C-201ENST00000304465 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
SRGAP2C-201ENST00000304465 C8orf37Q96NL8 207 aa22.99■■□□□ 1.27
SRGAP2C-201ENST00000304465 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
SRGAP2C-201ENST00000304465 ADAMTS2O95450 1211 aa22.98■■□□□ 1.27
SRGAP2C-201ENST00000304465 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
SRGAP2C-201ENST00000304465 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
SRGAP2C-201ENST00000304465 AFF2P51816 1311 aa22.97■■□□□ 1.27
SRGAP2C-201ENST00000304465 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
SRGAP2C-201ENST00000304465 PXDNQ92626 1479 aa22.96■■□□□ 1.27
SRGAP2C-201ENST00000304465 PSME1Q06323 249 aa22.96■■□□□ 1.27
SRGAP2C-201ENST00000304465 KRT28Q7Z3Y7 464 aa22.96■■□□□ 1.27
SRGAP2C-201ENST00000304465 NGLY1Q96IV0 654 aa22.95■■□□□ 1.26
SRGAP2C-201ENST00000304465 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
SRGAP2C-201ENST00000304465 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
SRGAP2C-201ENST00000304465 ADGRB2O60241 1585 aa22.94■■□□□ 1.26
SRGAP2C-201ENST00000304465 WASLO00401 505 aaPredicted RBP22.93■■□□□ 1.26
SRGAP2C-201ENST00000304465 RXRBP28702 533 aa22.92■■□□□ 1.26
SRGAP2C-201ENST00000304465 NBPF1Q3BBV0 1214 aa22.92■■□□□ 1.26
SRGAP2C-201ENST00000304465 PMFBP1Q8TBY8 1022 aa22.92■■□□□ 1.26
SRGAP2C-201ENST00000304465 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
SRGAP2C-201ENST00000304465 KIAA1210Q9ULL0 1709 aa22.9■■□□□ 1.26
SRGAP2C-201ENST00000304465 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.25
SRGAP2C-201ENST00000304465 HAP1P54257 671 aaPredicted RBP22.88■■□□□ 1.25
SRGAP2C-201ENST00000304465 COL22A1Q8NFW1 1626 aaPredicted RBP22.88■■□□□ 1.25
SRGAP2C-201ENST00000304465 RGPD8O14715 1765 aaPredicted RBP22.87■■□□□ 1.25
SRGAP2C-201ENST00000304465 TULP4Q9NRJ4 1543 aa22.87■■□□□ 1.25
SRGAP2C-201ENST00000304465 ARHGEF28Q8N1W1 1705 aaKnown RBP22.87■■□□□ 1.25
SRGAP2C-201ENST00000304465 QTRT2Q9H974 415 aaKnown RBP22.87■■□□□ 1.25
SRGAP2C-201ENST00000304465 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
SRGAP2C-201ENST00000304465 GPRASP1Q5JY77 1395 aa22.87■■□□□ 1.25
SRGAP2C-201ENST00000304465 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
SRGAP2C-201ENST00000304465 USP21Q9UK80 565 aa22.85■■□□□ 1.25
SRGAP2C-201ENST00000304465 PRR36Q9H6K5 1346 aa22.85■■□□□ 1.25
SRGAP2C-201ENST00000304465 TNS3Q68CZ2 1445 aa22.85■■□□□ 1.25
SRGAP2C-201ENST00000304465 SBNO1A3KN83 1393 aa22.84■■□□□ 1.25
SRGAP2C-201ENST00000304465 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
SRGAP2C-201ENST00000304465 ARHGEF10O15013 1369 aa22.84■■□□□ 1.25
SRGAP2C-201ENST00000304465 USP32Q8NFA0 1604 aa22.84■■□□□ 1.25
SRGAP2C-201ENST00000304465 PLEKHG5O94827 1062 aa22.83■■□□□ 1.25
SRGAP2C-201ENST00000304465 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
SRGAP2C-201ENST00000304465 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
SRGAP2C-201ENST00000304465 RBM6P78332 1123 aaKnown RBP22.82■■□□□ 1.24
SRGAP2C-201ENST00000304465 FNBP4Q8N3X1 1017 aaPredicted RBP22.81■■□□□ 1.24
SRGAP2C-201ENST00000304465 TRPC5Q9UL62 973 aaPredicted RBP22.8■■□□□ 1.24
SRGAP2C-201ENST00000304465 ROCK2O75116 1388 aaKnown RBP22.8■■□□□ 1.24
SRGAP2C-201ENST00000304465 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
SRGAP2C-201ENST00000304465 SRPK2P78362 688 aaKnown RBP22.79■■□□□ 1.24
SRGAP2C-201ENST00000304465 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
SRGAP2C-201ENST00000304465 CDK12Q9NYV4 1490 aaPredicted RBP22.77■■□□□ 1.24
SRGAP2C-201ENST00000304465 CABLES1Q8TDN4 633 aa22.77■■□□□ 1.24
SRGAP2C-201ENST00000304465 CCDC61Q9Y6R9 512 aa22.77■■□□□ 1.24
SRGAP2C-201ENST00000304465 ATP7BP35670 1465 aa22.77■■□□□ 1.24
SRGAP2C-201ENST00000304465 ITSN1Q15811 1721 aa22.74■■□□□ 1.23
SRGAP2C-201ENST00000304465 TRPM1Q7Z4N2 1603 aa22.73■■□□□ 1.23
SRGAP2C-201ENST00000304465 CABP2Q9NPB3 220 aa22.71■■□□□ 1.23
SRGAP2C-201ENST00000304465 MARF1Q9Y4F3 1742 aaKnown RBP22.71■■□□□ 1.23
SRGAP2C-201ENST00000304465 BCL9LQ86UU0 1499 aa22.7■■□□□ 1.22
SRGAP2C-201ENST00000304465 ATRNO75882 1429 aa22.7■■□□□ 1.22
SRGAP2C-201ENST00000304465 ACEP12821 1306 aa22.7■■□□□ 1.22
SRGAP2C-201ENST00000304465 EVC2Q86UK5 1308 aa22.7■■□□□ 1.22
SRGAP2C-201ENST00000304465 PLEKHG3A1L390 1219 aa22.7■■□□□ 1.22
SRGAP2C-201ENST00000304465 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.22
SRGAP2C-201ENST00000304465 UNC5CLQ8IV45 518 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms