RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
UBXN1-202ENST00000301935 COL22A1Q8NFW1 1626 aaPredicted RBP21.98■■□□□ 1.11
UBXN1-202ENST00000301935 SOS2Q07890 1332 aaPredicted RBP21.98■■□□□ 1.11
UBXN1-202ENST00000301935 ORAI2Q96SN7 254 aa21.96■■□□□ 1.11
UBXN1-202ENST00000301935 IFT172Q9UG01 1749 aa21.96■■□□□ 1.11
UBXN1-202ENST00000301935 RBM6P78332 1123 aaKnown RBP21.95■■□□□ 1.1
UBXN1-202ENST00000301935 QTRT2Q9H974 415 aaKnown RBP21.94■■□□□ 1.1
UBXN1-202ENST00000301935 ADAMTS2O95450 1211 aa21.93■■□□□ 1.1
UBXN1-202ENST00000301935 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
UBXN1-202ENST00000301935 NGLY1Q96IV0 654 aa21.91■■□□□ 1.1
UBXN1-202ENST00000301935 CCDC144AA2RUR9 1427 aa21.9■■□□□ 1.1
UBXN1-202ENST00000301935 MARF1Q9Y4F3 1742 aaKnown RBP21.9■■□□□ 1.1
UBXN1-202ENST00000301935 TECPR2O15040 1411 aa21.89■■□□□ 1.1
UBXN1-202ENST00000301935 ANKRD30BQ9BXX2 1392 aa21.89■■□□□ 1.1
UBXN1-202ENST00000301935 MYOM2P54296 1465 aa21.89■■□□□ 1.09
UBXN1-202ENST00000301935 PXDNQ92626 1479 aa21.89■■□□□ 1.09
UBXN1-202ENST00000301935 SPATA31E1Q6ZUB1 1445 aa21.88■■□□□ 1.09
UBXN1-202ENST00000301935 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
UBXN1-202ENST00000301935 FOXD1Q16676 465 aa21.87■■□□□ 1.09
UBXN1-202ENST00000301935 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
UBXN1-202ENST00000301935 USP21Q9UK80 565 aa21.86■■□□□ 1.09
UBXN1-202ENST00000301935 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
UBXN1-202ENST00000301935 FMN2Q9NZ56 1722 aa21.85■■□□□ 1.09
UBXN1-202ENST00000301935 ATRNO75882 1429 aa21.84■■□□□ 1.09
UBXN1-202ENST00000301935 ESCO1Q5FWF5 840 aa21.84■■□□□ 1.09
UBXN1-202ENST00000301935 FNBP4Q8N3X1 1017 aaPredicted RBP21.84■■□□□ 1.09
UBXN1-202ENST00000301935 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
UBXN1-202ENST00000301935 TRPC5Q9UL62 973 aaPredicted RBP21.83■■□□□ 1.09
UBXN1-202ENST00000301935 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.08
UBXN1-202ENST00000301935 ATAD2Q6PL18 1390 aa21.83■■□□□ 1.08
UBXN1-202ENST00000301935 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
UBXN1-202ENST00000301935 TIMELESSQ9UNS1 1208 aa21.82■■□□□ 1.08
UBXN1-202ENST00000301935 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
UBXN1-202ENST00000301935 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
UBXN1-202ENST00000301935 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
UBXN1-202ENST00000301935 PLEKHH1Q9ULM0 1364 aa21.79■■□□□ 1.08
UBXN1-202ENST00000301935 STK26Q9P289 416 aa21.79■■□□□ 1.08
UBXN1-202ENST00000301935 BCL9LQ86UU0 1499 aa21.78■■□□□ 1.08
UBXN1-202ENST00000301935 FOXO3O43524 673 aa21.78■■□□□ 1.08
UBXN1-202ENST00000301935 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
UBXN1-202ENST00000301935 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
UBXN1-202ENST00000301935 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
UBXN1-202ENST00000301935 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
UBXN1-202ENST00000301935 EP400Q96L91 3159 aa21.75■■□□□ 1.07
UBXN1-202ENST00000301935 TMEM132EQ6IEE7 984 aa21.75■■□□□ 1.07
UBXN1-202ENST00000301935 USP32Q8NFA0 1604 aa21.74■■□□□ 1.07
UBXN1-202ENST00000301935 SIN3AQ96ST3 1273 aa21.74■■□□□ 1.07
UBXN1-202ENST00000301935 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
UBXN1-202ENST00000301935 NRXN1Q9ULB1 1477 aa21.73■■□□□ 1.07
UBXN1-202ENST00000301935 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
UBXN1-202ENST00000301935 SLIT2O94813 1529 aa21.7■■□□□ 1.07
UBXN1-202ENST00000301935 GLI3P10071 1580 aa21.7■■□□□ 1.06
UBXN1-202ENST00000301935 SPATA31A3Q5VYP0 1347 aa21.7■■□□□ 1.06
UBXN1-202ENST00000301935 ABCA3Q99758 1704 aa21.69■■□□□ 1.06
UBXN1-202ENST00000301935 SIRT1Q96EB6 747 aa21.68■■□□□ 1.06
UBXN1-202ENST00000301935 GJD4Q96KN9 370 aaPredicted RBP21.68■■□□□ 1.06
UBXN1-202ENST00000301935 TONSLQ96HA7 1378 aa21.68■■□□□ 1.06
UBXN1-202ENST00000301935 PLCH1Q4KWH8 1693 aa21.67■■□□□ 1.06
UBXN1-202ENST00000301935 TNS3Q68CZ2 1445 aa21.67■■□□□ 1.06
UBXN1-202ENST00000301935 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
UBXN1-202ENST00000301935 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
UBXN1-202ENST00000301935 STAC3Q96MF2 364 aa21.66■■□□□ 1.06
UBXN1-202ENST00000301935 NWD2Q9ULI1 1742 aa21.65■■□□□ 1.06
UBXN1-202ENST00000301935 KRT28Q7Z3Y7 464 aa21.64■■□□□ 1.05
UBXN1-202ENST00000301935 UNC5CLQ8IV45 518 aa21.64■■□□□ 1.05
UBXN1-202ENST00000301935 ADGRB2O60241 1585 aa21.64■■□□□ 1.05
UBXN1-202ENST00000301935 DLC1Q96QB1 1528 aa21.64■■□□□ 1.05
UBXN1-202ENST00000301935 BRWD3Q6RI45 1802 aa21.64■■□□□ 1.05
UBXN1-202ENST00000301935 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
UBXN1-202ENST00000301935 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
UBXN1-202ENST00000301935 CCDC125Q86Z20 511 aa21.62■■□□□ 1.05
UBXN1-202ENST00000301935 PHF8Q9UPP1 1060 aa21.62■■□□□ 1.05
UBXN1-202ENST00000301935 ADGRB1O14514 1584 aa21.6■■□□□ 1.05
UBXN1-202ENST00000301935 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
UBXN1-202ENST00000301935 ANKARQ7Z5J8 1434 aa21.59■■□□□ 1.05
UBXN1-202ENST00000301935 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
UBXN1-202ENST00000301935 ZRANB1Q9UGI0 708 aa21.59■■□□□ 1.05
UBXN1-202ENST00000301935 TRPM3Q9HCF6 1732 aaPredicted RBP21.58■■□□□ 1.05
UBXN1-202ENST00000301935 HAP1P54257 671 aaPredicted RBP21.58■■□□□ 1.05
UBXN1-202ENST00000301935 PSME1Q06323 249 aa21.58■■□□□ 1.05
UBXN1-202ENST00000301935 L3MBTL2Q969R5 705 aa21.58■■□□□ 1.05
UBXN1-202ENST00000301935 BLMP54132 1417 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-202ENST00000301935 SAFB2Q14151 953 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBXN1-202ENST00000301935 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
UBXN1-202ENST00000301935 NRAPQ86VF7 1730 aa21.56■■□□□ 1.04
UBXN1-202ENST00000301935 CABLES1Q8TDN4 633 aa21.55■■□□□ 1.04
UBXN1-202ENST00000301935 ALS2Q96Q42 1657 aa21.55■■□□□ 1.04
UBXN1-202ENST00000301935 VPS72Q15906 364 aa21.54■■□□□ 1.04
UBXN1-202ENST00000301935 TULP4Q9NRJ4 1543 aa21.52■■□□□ 1.04
UBXN1-202ENST00000301935 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
UBXN1-202ENST00000301935 POGKQ9P215 609 aa21.52■■□□□ 1.04
UBXN1-202ENST00000301935 PLEKHG5O94827 1062 aa21.51■■□□□ 1.03
UBXN1-202ENST00000301935 LMOD2Q6P5Q4 547 aa21.51■■□□□ 1.03
UBXN1-202ENST00000301935 CRYBG1Q9Y4K1 1723 aa21.51■■□□□ 1.03
UBXN1-202ENST00000301935 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
UBXN1-202ENST00000301935 PMFBP1Q8TBY8 1022 aa21.5■■□□□ 1.03
UBXN1-202ENST00000301935 EIF3AQ14152 1382 aaKnown RBP21.49■■□□□ 1.03
UBXN1-202ENST00000301935 COL14A1Q05707 1796 aaKnown RBP21.49■■□□□ 1.03
UBXN1-202ENST00000301935 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
UBXN1-202ENST00000301935 ARHGEF28Q8N1W1 1705 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms