RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
SPSB3-201ENST00000301717 C1orf167Q5SNV9 1468 aa26.25■■□□□ 1.79
SPSB3-201ENST00000301717 DDX17Q92841 729 aaKnown RBP26.24■■□□□ 1.79
SPSB3-201ENST00000301717 SIRT1Q96EB6 747 aa26.24■■□□□ 1.79
SPSB3-201ENST00000301717 POGKQ9P215 609 aa26.24■■□□□ 1.79
SPSB3-201ENST00000301717 DLC1Q96QB1 1528 aa26.24■■□□□ 1.79
SPSB3-201ENST00000301717 ORAI2Q96SN7 254 aa26.23■■□□□ 1.79
SPSB3-201ENST00000301717 CDC42BPGQ6DT37 1551 aa26.23■■□□□ 1.79
SPSB3-201ENST00000301717 NBPF8Q3BBV2 869 aa26.22■■□□□ 1.79
SPSB3-201ENST00000301717 TONSLQ96HA7 1378 aa26.21■■□□□ 1.79
SPSB3-201ENST00000301717 HIRIP3Q9BW71 556 aaPredicted RBP26.21■■□□□ 1.79
SPSB3-201ENST00000301717 MINK1Q8N4C8 1332 aaPredicted RBP26.19■■□□□ 1.78
SPSB3-201ENST00000301717 PHLPP1O60346 1717 aa26.19■■□□□ 1.78
SPSB3-201ENST00000301717 KIAA1210Q9ULL0 1709 aa26.19■■□□□ 1.78
SPSB3-201ENST00000301717 COL16A1Q07092 1604 aaPredicted RBP26.16■■□□□ 1.78
SPSB3-201ENST00000301717 AHDC1Q5TGY3 1603 aaPredicted RBP26.16■■□□□ 1.78
SPSB3-201ENST00000301717 ARHGEF28Q8N1W1 1705 aaKnown RBP26.16■■□□□ 1.78
SPSB3-201ENST00000301717 ESCO1Q5FWF5 840 aa26.14■■□□□ 1.78
SPSB3-201ENST00000301717 TRPM1Q7Z4N2 1603 aa26.14■■□□□ 1.78
SPSB3-201ENST00000301717 FMN2Q9NZ56 1722 aa26.12■■□□□ 1.77
SPSB3-201ENST00000301717 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
SPSB3-201ENST00000301717 DISP3Q9P2K9 1392 aa26.1■■□□□ 1.77
SPSB3-201ENST00000301717 NHSL1Q5SYE7 1610 aa26.09■■□□□ 1.77
SPSB3-201ENST00000301717 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
SPSB3-201ENST00000301717 ADGRB2O60241 1585 aa26.08■■□□□ 1.76
SPSB3-201ENST00000301717 XPCQ01831 940 aaPredicted RBP26.07■■□□□ 1.76
SPSB3-201ENST00000301717 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
SPSB3-201ENST00000301717 JCADQ9P266 1359 aa26.06■■□□□ 1.76
SPSB3-201ENST00000301717 FOXO3O43524 673 aa26.05■■□□□ 1.76
SPSB3-201ENST00000301717 WASLO00401 505 aaPredicted RBP26.05■■□□□ 1.76
SPSB3-201ENST00000301717 PRR36Q9H6K5 1346 aa26.04■■□□□ 1.76
SPSB3-201ENST00000301717 USP32Q8NFA0 1604 aa26.03■■□□□ 1.76
SPSB3-201ENST00000301717 CENPJQ9HC77 1338 aaPredicted RBP26.03■■□□□ 1.76
SPSB3-201ENST00000301717 RGPD8O14715 1765 aaPredicted RBP26.02■■□□□ 1.76
SPSB3-201ENST00000301717 RALGAPBQ86X10 1494 aa26■■□□□ 1.75
SPSB3-201ENST00000301717 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
SPSB3-201ENST00000301717 SOS2Q07890 1332 aaPredicted RBP26■■□□□ 1.75
SPSB3-201ENST00000301717 PMFBP1Q8TBY8 1022 aa26■■□□□ 1.75
SPSB3-201ENST00000301717 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
SPSB3-201ENST00000301717 CDK19Q9BWU1 502 aa25.99■■□□□ 1.75
SPSB3-201ENST00000301717 CARD11Q9BXL7 1154 aa25.99■■□□□ 1.75
SPSB3-201ENST00000301717 PHF8Q9UPP1 1060 aa25.99■■□□□ 1.75
SPSB3-201ENST00000301717 TULP4Q9NRJ4 1543 aa25.98■■□□□ 1.75
SPSB3-201ENST00000301717 PXDNQ92626 1479 aa25.98■■□□□ 1.75
SPSB3-201ENST00000301717 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
SPSB3-201ENST00000301717 NPHP3Q7Z494 1330 aa25.98■■□□□ 1.75
SPSB3-201ENST00000301717 LRRC59Q96AG4 307 aaKnown RBP25.97■■□□□ 1.75
SPSB3-201ENST00000301717 LRP6O75581 1613 aa25.97■■□□□ 1.75
SPSB3-201ENST00000301717 PNPLA6Q8IY17 1366 aa25.96■■□□□ 1.75
SPSB3-201ENST00000301717 NUTM2BA6NNL0 878 aaPredicted RBP25.96■■□□□ 1.75
SPSB3-201ENST00000301717 NUTM2EB1AL46 878 aaPredicted RBP25.96■■□□□ 1.75
SPSB3-201ENST00000301717 NUTM2AQ8IVF1 878 aaPredicted RBP25.96■■□□□ 1.75
SPSB3-201ENST00000301717 QRICH2Q9H0J4 1663 aa25.96■■□□□ 1.75
SPSB3-201ENST00000301717 ATP7BP35670 1465 aa25.95■■□□□ 1.74
SPSB3-201ENST00000301717 SHPRHQ149N8 1683 aa25.94■■□□□ 1.74
SPSB3-201ENST00000301717 NUDT16Q96DE0 195 aaKnown RBP25.94■■□□□ 1.74
SPSB3-201ENST00000301717 KIF1AQ12756 1690 aa25.93■■□□□ 1.74
SPSB3-201ENST00000301717 KRT28Q7Z3Y7 464 aa25.92■■□□□ 1.74
SPSB3-201ENST00000301717 PHF23Q9BUL5 403 aaPredicted RBP25.92■■□□□ 1.74
SPSB3-201ENST00000301717 CABP2Q9NPB3 220 aa25.92■■□□□ 1.74
SPSB3-201ENST00000301717 EIF3AQ14152 1382 aaKnown RBP25.92■■□□□ 1.74
SPSB3-201ENST00000301717 SPATA31A6Q5VVP1 1343 aa25.91■■□□□ 1.74
SPSB3-201ENST00000301717 SRPK2P78362 688 aaKnown RBP25.89■■□□□ 1.74
SPSB3-201ENST00000301717 ILDR2Q71H61 639 aa25.89■■□□□ 1.74
SPSB3-201ENST00000301717 RGS17Q9UGC6 210 aaPredicted RBP25.88■■□□□ 1.73
SPSB3-201ENST00000301717 PSME1Q06323 249 aa25.87■■□□□ 1.73
SPSB3-201ENST00000301717 PLEKHG5O94827 1062 aa25.86■■□□□ 1.73
SPSB3-201ENST00000301717 MEX3CQ5U5Q3 659 aaKnown RBP25.85■■□□□ 1.73
SPSB3-201ENST00000301717 NGDNQ8NEJ9 315 aaKnown RBP25.85■■□□□ 1.73
SPSB3-201ENST00000301717 SPATA31A3Q5VYP0 1347 aa25.85■■□□□ 1.73
SPSB3-201ENST00000301717 TIMELESSQ9UNS1 1208 aa25.84■■□□□ 1.73
SPSB3-201ENST00000301717 ADAMTS2O95450 1211 aa25.82■■□□□ 1.72
SPSB3-201ENST00000301717 CCDC61Q9Y6R9 512 aa25.82■■□□□ 1.72
SPSB3-201ENST00000301717 TOPAZ1Q8N9V7 1692 aa25.82■■□□□ 1.72
SPSB3-201ENST00000301717 LMOD2Q6P5Q4 547 aa25.81■■□□□ 1.72
SPSB3-201ENST00000301717 EVC2Q86UK5 1308 aa25.81■■□□□ 1.72
SPSB3-201ENST00000301717 TNS3Q68CZ2 1445 aa25.8■■□□□ 1.72
SPSB3-201ENST00000301717 PPIP5K1Q6PFW1 1433 aa25.8■■□□□ 1.72
SPSB3-201ENST00000301717 ACEP12821 1306 aa25.79■■□□□ 1.72
SPSB3-201ENST00000301717 ST20-MTHFSA0A0A6YYL1 179 aa25.79■■□□□ 1.72
SPSB3-201ENST00000301717 ITSN1Q15811 1721 aa25.79■■□□□ 1.72
SPSB3-201ENST00000301717 COL22A1Q8NFW1 1626 aaPredicted RBP25.78■■□□□ 1.72
SPSB3-201ENST00000301717 CABLES1Q8TDN4 633 aa25.78■■□□□ 1.72
SPSB3-201ENST00000301717 SBNO1A3KN83 1393 aa25.77■■□□□ 1.72
SPSB3-201ENST00000301717 CABP1Q9NZU7 370 aa25.77■■□□□ 1.72
SPSB3-201ENST00000301717 PLEKHG3A1L390 1219 aa25.76■■□□□ 1.71
SPSB3-201ENST00000301717 POTEAQ6S8J7 498 aa25.76■■□□□ 1.71
SPSB3-201ENST00000301717 C8orf37Q96NL8 207 aa25.76■■□□□ 1.71
SPSB3-201ENST00000301717 TRPM3Q9HCF6 1732 aaPredicted RBP25.76■■□□□ 1.71
SPSB3-201ENST00000301717 POLR3AO14802 1390 aaPredicted RBP25.75■■□□□ 1.71
SPSB3-201ENST00000301717 USP47Q96K76 1375 aa25.75■■□□□ 1.71
SPSB3-201ENST00000301717 PAK3O75914 559 aaPredicted RBP25.75■■□□□ 1.71
SPSB3-201ENST00000301717 SBNO2Q9Y2G9 1366 aa25.74■■□□□ 1.71
SPSB3-201ENST00000301717 TESK2Q96S53 571 aa25.74■■□□□ 1.71
SPSB3-201ENST00000301717 AFF2P51816 1311 aa25.71■■□□□ 1.71
SPSB3-201ENST00000301717 NUTM2GQ5VZR2 741 aa25.7■■□□□ 1.7
SPSB3-201ENST00000301717 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
SPSB3-201ENST00000301717 ALS2Q96Q42 1657 aa25.68■■□□□ 1.7
SPSB3-201ENST00000301717 NGLY1Q96IV0 654 aa25.68■■□□□ 1.7
SPSB3-201ENST00000301717 HAP1P54257 671 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms