RNA–Protein interactions for RNA: ENST00000288828.8

WIPI2-201, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best) BASIC

Gene WIPI2, Length 4,476 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-201ENST00000288828 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
WIPI2-201ENST00000288828 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
WIPI2-201ENST00000288828 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.56■■□□□ 1.04
WIPI2-201ENST00000288828 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
WIPI2-201ENST00000288828 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
WIPI2-201ENST00000288828 SKAP1Q86WV1 359 aa21.54■■□□□ 1.04
WIPI2-201ENST00000288828 WWC1Q8IX03 1113 aa21.54■■□□□ 1.04
WIPI2-201ENST00000288828 DIAPH3Q9NSV4 1193 aa21.54■■□□□ 1.04
WIPI2-201ENST00000288828 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
WIPI2-201ENST00000288828 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
WIPI2-201ENST00000288828 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
WIPI2-201ENST00000288828 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
WIPI2-201ENST00000288828 TAF7LQ5H9L4 462 aa21.53■■□□□ 1.04
WIPI2-201ENST00000288828 C9orf78Q9NZ63 289 aaPredicted RBP21.53■■□□□ 1.04
WIPI2-201ENST00000288828 CDC45O75419 566 aa21.53■■□□□ 1.04
WIPI2-201ENST00000288828 ATP6V1DQ9Y5K8 247 aa21.52■■□□□ 1.04
WIPI2-201ENST00000288828 NUCB2P80303 420 aa21.51■■□□□ 1.03
WIPI2-201ENST00000288828 ATF7IPQ6VMQ6 1270 aa21.51■■□□□ 1.03
WIPI2-201ENST00000288828 CABP1Q9NZU7 370 aa21.51■■□□□ 1.03
WIPI2-201ENST00000288828 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
WIPI2-201ENST00000288828 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
WIPI2-201ENST00000288828 MVPQ14764 893 aaKnown RBP21.5■■□□□ 1.03
WIPI2-201ENST00000288828 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
WIPI2-201ENST00000288828 NINLQ9Y2I6 1382 aa21.5■■□□□ 1.03
WIPI2-201ENST00000288828 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
WIPI2-201ENST00000288828 SLC52A1Q9NWF4 448 aa21.48■■□□□ 1.03
WIPI2-201ENST00000288828 RUFY2Q8WXA3 655 aa21.48■■□□□ 1.03
WIPI2-201ENST00000288828 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
WIPI2-201ENST00000288828 CCDC9Q9Y3X0 531 aaKnown RBP21.48■■□□□ 1.03
WIPI2-201ENST00000288828 TRAK2O60296 914 aa21.47■■□□□ 1.03
WIPI2-201ENST00000288828 ZKSCAN1P17029 563 aaPredicted RBP21.46■■□□□ 1.03
WIPI2-201ENST00000288828 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
WIPI2-201ENST00000288828 KIF3AQ9Y496 699 aa21.46■■□□□ 1.03
WIPI2-201ENST00000288828 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
WIPI2-201ENST00000288828 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
WIPI2-201ENST00000288828 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
WIPI2-201ENST00000288828 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
WIPI2-201ENST00000288828 MCTP1Q6DN14 999 aa21.46■■□□□ 1.03
WIPI2-201ENST00000288828 IFIT2P09913 472 aaKnown RBP21.45■■□□□ 1.02
WIPI2-201ENST00000288828 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
WIPI2-201ENST00000288828 NLRP6P59044 892 aa21.44■■□□□ 1.02
WIPI2-201ENST00000288828 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
WIPI2-201ENST00000288828 NUTM2GQ5VZR2 741 aa21.43■■□□□ 1.02
WIPI2-201ENST00000288828 RPGRIP1LQ68CZ1 1315 aa21.43■■□□□ 1.02
WIPI2-201ENST00000288828 MRE11P49959 708 aa21.43■■□□□ 1.02
WIPI2-201ENST00000288828 IL27Q8NEV9 243 aa21.43■■□□□ 1.02
WIPI2-201ENST00000288828 HSP90AA2PQ14568 343 aaPredicted RBP21.42■■□□□ 1.02
WIPI2-201ENST00000288828 H3BQV1 296 aa21.42■■□□□ 1.02
WIPI2-201ENST00000288828 IFFO2Q5TF58 517 aa21.42■■□□□ 1.02
WIPI2-201ENST00000288828 DUSP27Q5VZP5 1158 aa21.42■■□□□ 1.02
WIPI2-201ENST00000288828 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
WIPI2-201ENST00000288828 SF3A1Q15459 793 aaKnown RBP21.41■■□□□ 1.02
WIPI2-201ENST00000288828 FAM184AQ8NB25 1140 aa21.41■■□□□ 1.02
WIPI2-201ENST00000288828 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
WIPI2-201ENST00000288828 PSME1Q06323 249 aa21.41■■□□□ 1.02
WIPI2-201ENST00000288828 SULT6B1Q6IMI4 303 aa21.41■■□□□ 1.02
WIPI2-201ENST00000288828 TULP1O00294 542 aaPredicted RBP21.41■■□□□ 1.02
WIPI2-201ENST00000288828 UBTFL1P0CB47 393 aaPredicted RBP21.41■■□□□ 1.02
WIPI2-201ENST00000288828 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
WIPI2-201ENST00000288828 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
WIPI2-201ENST00000288828 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
WIPI2-201ENST00000288828 KIF14Q15058 1648 aa21.39■■□□□ 1.01
WIPI2-201ENST00000288828 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.01
WIPI2-201ENST00000288828 GNAI3P08754 354 aa21.39■■□□□ 1.01
WIPI2-201ENST00000288828 ADGRF5Q8IZF2 1346 aa21.38■■□□□ 1.01
WIPI2-201ENST00000288828 TPM4P67936 248 aa21.38■■□□□ 1.01
WIPI2-201ENST00000288828 HSP90AB4PQ58FF6 505 aa21.38■■□□□ 1.01
WIPI2-201ENST00000288828 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
WIPI2-201ENST00000288828 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.01
WIPI2-201ENST00000288828 ATAD2Q6PL18 1390 aa21.38■■□□□ 1.01
WIPI2-201ENST00000288828 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
WIPI2-201ENST00000288828 VPS37CA5D8V6 355 aaPredicted RBP21.36■■□□□ 1.01
WIPI2-201ENST00000288828 FCHSD2O94868 740 aa21.36■■□□□ 1.01
WIPI2-201ENST00000288828 NEK4P51957 841 aa21.36■■□□□ 1.01
WIPI2-201ENST00000288828 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
WIPI2-201ENST00000288828 SMC3Q9UQE7 1217 aa21.36■■□□□ 1.01
WIPI2-201ENST00000288828 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
WIPI2-201ENST00000288828 TOMM22Q9NS69 142 aa21.36■■□□□ 1.01
WIPI2-201ENST00000288828 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
WIPI2-201ENST00000288828 GAS2L2Q8NHY3 880 aa21.35■■□□□ 1.01
WIPI2-201ENST00000288828 RABEP1Q15276 862 aa21.35■■□□□ 1.01
WIPI2-201ENST00000288828 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
WIPI2-201ENST00000288828 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
WIPI2-201ENST00000288828 ERC2O15083 957 aa21.34■■□□□ 1.01
WIPI2-201ENST00000288828 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
WIPI2-201ENST00000288828 NASPP49321 788 aaPredicted RBP21.33■■□□□ 1.01
WIPI2-201ENST00000288828 RNF20Q5VTR2 975 aa21.33■■□□□ 1.01
WIPI2-201ENST00000288828 FAM43AQ8N2R8 423 aa21.33■■□□□ 1.01
WIPI2-201ENST00000288828 SSH1Q8WYL5 1049 aa21.33■■□□□ 1.01
WIPI2-201ENST00000288828 ZNF428Q96B54 188 aa21.33■■□□□ 1
WIPI2-201ENST00000288828 CCDC34Q96HJ3 373 aa21.32■■□□□ 1
WIPI2-201ENST00000288828 BECN2A8MW95 431 aa21.32■■□□□ 1
WIPI2-201ENST00000288828 RRS1Q15050 365 aaKnown RBP21.32■■□□□ 1
WIPI2-201ENST00000288828 ZNF692Q9BU19 519 aaPredicted RBP21.32■■□□□ 1
WIPI2-201ENST00000288828 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
WIPI2-201ENST00000288828 GOLGA6L19H0YKK7 550 aa21.32■■□□□ 1
WIPI2-201ENST00000288828 THUMPD2Q9BTF0 503 aaKnown RBP21.32■■□□□ 1
WIPI2-201ENST00000288828 RTEL1-TNFRSF6BF6WH68 1400 aa21.31■■□□□ 1
WIPI2-201ENST00000288828 CAVIN1Q6NZI2 390 aaKnown RBP21.31■■□□□ 1
WIPI2-201ENST00000288828 ISY1Q9ULR0 285 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms