RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 DDX17Q92841 729 aaKnown RBP29.66■■■□□ 2.34
RAB28-201ENST00000288723 SIRT1Q96EB6 747 aa29.66■■■□□ 2.34
RAB28-201ENST00000288723 PRAM1Q96QH2 718 aa29.66■■■□□ 2.34
RAB28-201ENST00000288723 ORAI2Q96SN7 254 aa29.66■■■□□ 2.34
RAB28-201ENST00000288723 NUTM2FA1L443 756 aa29.64■■■□□ 2.34
RAB28-201ENST00000288723 COL16A1Q07092 1604 aaPredicted RBP29.64■■■□□ 2.34
RAB28-201ENST00000288723 AHDC1Q5TGY3 1603 aaPredicted RBP29.64■■■□□ 2.34
RAB28-201ENST00000288723 L3MBTL2Q969R5 705 aa29.64■■■□□ 2.33
RAB28-201ENST00000288723 POGKQ9P215 609 aa29.61■■■□□ 2.33
RAB28-201ENST00000288723 CDC42BPGQ6DT37 1551 aa29.61■■■□□ 2.33
RAB28-201ENST00000288723 JCADQ9P266 1359 aa29.59■■■□□ 2.33
RAB28-201ENST00000288723 ILDR2Q71H61 639 aa29.58■■■□□ 2.33
RAB28-201ENST00000288723 ESCO1Q5FWF5 840 aa29.57■■■□□ 2.32
RAB28-201ENST00000288723 DLC1Q96QB1 1528 aa29.57■■■□□ 2.32
RAB28-201ENST00000288723 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
RAB28-201ENST00000288723 PHF23Q9BUL5 403 aaPredicted RBP29.55■■■□□ 2.32
RAB28-201ENST00000288723 NHSL1Q5SYE7 1610 aa29.55■■■□□ 2.32
RAB28-201ENST00000288723 HIRIP3Q9BW71 556 aaPredicted RBP29.53■■■□□ 2.32
RAB28-201ENST00000288723 MINK1Q8N4C8 1332 aaPredicted RBP29.51■■■□□ 2.31
RAB28-201ENST00000288723 PCGF6Q9BYE7 350 aa29.5■■■□□ 2.31
RAB28-201ENST00000288723 FMN2Q9NZ56 1722 aa29.49■■■□□ 2.31
RAB28-201ENST00000288723 LRRC59Q96AG4 307 aaKnown RBP29.49■■■□□ 2.31
RAB28-201ENST00000288723 FOXO3O43524 673 aa29.48■■■□□ 2.31
RAB28-201ENST00000288723 KIAA1210Q9ULL0 1709 aa29.47■■■□□ 2.31
RAB28-201ENST00000288723 XPCQ01831 940 aaPredicted RBP29.45■■■□□ 2.31
RAB28-201ENST00000288723 SOS2Q07890 1332 aaPredicted RBP29.45■■■□□ 2.31
RAB28-201ENST00000288723 SPATA31A6Q5VVP1 1343 aa29.45■■■□□ 2.3
RAB28-201ENST00000288723 ARHGEF28Q8N1W1 1705 aaKnown RBP29.44■■■□□ 2.3
RAB28-201ENST00000288723 SHPRHQ149N8 1683 aa29.43■■■□□ 2.3
RAB28-201ENST00000288723 NUTM2BA6NNL0 878 aaPredicted RBP29.43■■■□□ 2.3
RAB28-201ENST00000288723 NUTM2EB1AL46 878 aaPredicted RBP29.43■■■□□ 2.3
RAB28-201ENST00000288723 NUTM2AQ8IVF1 878 aaPredicted RBP29.43■■■□□ 2.3
RAB28-201ENST00000288723 RGS17Q9UGC6 210 aaPredicted RBP29.43■■■□□ 2.3
RAB28-201ENST00000288723 LRP6O75581 1613 aa29.42■■■□□ 2.3
RAB28-201ENST00000288723 NPHP3Q7Z494 1330 aa29.42■■■□□ 2.3
RAB28-201ENST00000288723 ADGRB2O60241 1585 aa29.4■■■□□ 2.3
RAB28-201ENST00000288723 RGPD8O14715 1765 aaPredicted RBP29.4■■■□□ 2.3
RAB28-201ENST00000288723 PNPLA6Q8IY17 1366 aa29.39■■■□□ 2.3
RAB28-201ENST00000288723 NBPF8Q3BBV2 869 aa29.39■■■□□ 2.3
RAB28-201ENST00000288723 WASLO00401 505 aaPredicted RBP29.38■■■□□ 2.29
RAB28-201ENST00000288723 PHF8Q9UPP1 1060 aa29.38■■■□□ 2.29
RAB28-201ENST00000288723 TONSLQ96HA7 1378 aa29.38■■■□□ 2.29
RAB28-201ENST00000288723 MEX3CQ5U5Q3 659 aaKnown RBP29.37■■■□□ 2.29
RAB28-201ENST00000288723 PXDNQ92626 1479 aa29.36■■■□□ 2.29
RAB28-201ENST00000288723 PMFBP1Q8TBY8 1022 aa29.35■■■□□ 2.29
RAB28-201ENST00000288723 USP32Q8NFA0 1604 aa29.35■■■□□ 2.29
RAB28-201ENST00000288723 PRR36Q9H6K5 1346 aa29.34■■■□□ 2.29
RAB28-201ENST00000288723 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
RAB28-201ENST00000288723 ANKARQ7Z5J8 1434 aa29.33■■■□□ 2.29
RAB28-201ENST00000288723 ROCK2O75116 1388 aaKnown RBP29.33■■■□□ 2.29
RAB28-201ENST00000288723 KRT28Q7Z3Y7 464 aa29.31■■■□□ 2.28
RAB28-201ENST00000288723 KIF1AQ12756 1690 aa29.31■■■□□ 2.28
RAB28-201ENST00000288723 CDK19Q9BWU1 502 aa29.3■■■□□ 2.28
RAB28-201ENST00000288723 CENPJQ9HC77 1338 aaPredicted RBP29.3■■■□□ 2.28
RAB28-201ENST00000288723 TULP4Q9NRJ4 1543 aa29.29■■■□□ 2.28
RAB28-201ENST00000288723 POTEAQ6S8J7 498 aa29.29■■■□□ 2.28
RAB28-201ENST00000288723 EIF3AQ14152 1382 aaKnown RBP29.28■■■□□ 2.28
RAB28-201ENST00000288723 PSME1Q06323 249 aa29.27■■■□□ 2.28
RAB28-201ENST00000288723 ADAMTS2O95450 1211 aa29.26■■■□□ 2.27
RAB28-201ENST00000288723 NUDT16Q96DE0 195 aaKnown RBP29.26■■■□□ 2.27
RAB28-201ENST00000288723 SPATA31A3Q5VYP0 1347 aa29.24■■■□□ 2.27
RAB28-201ENST00000288723 C8orf37Q96NL8 207 aa29.22■■■□□ 2.27
RAB28-201ENST00000288723 ATP7BP35670 1465 aa29.22■■■□□ 2.27
RAB28-201ENST00000288723 NGDNQ8NEJ9 315 aaKnown RBP29.2■■■□□ 2.26
RAB28-201ENST00000288723 CARD11Q9BXL7 1154 aa29.2■■■□□ 2.26
RAB28-201ENST00000288723 QRICH2Q9H0J4 1663 aa29.2■■■□□ 2.26
RAB28-201ENST00000288723 GPRASP1Q5JY77 1395 aa29.19■■■□□ 2.26
RAB28-201ENST00000288723 COL22A1Q8NFW1 1626 aaPredicted RBP29.19■■■□□ 2.26
RAB28-201ENST00000288723 PLEKHG5O94827 1062 aa29.19■■■□□ 2.26
RAB28-201ENST00000288723 SRPK2P78362 688 aaKnown RBP29.19■■■□□ 2.26
RAB28-201ENST00000288723 LMOD2Q6P5Q4 547 aa29.19■■■□□ 2.26
RAB28-201ENST00000288723 SOCS7O14512 581 aa29.18■■■□□ 2.26
RAB28-201ENST00000288723 CABP2Q9NPB3 220 aa29.18■■■□□ 2.26
RAB28-201ENST00000288723 AFF2P51816 1311 aa29.18■■■□□ 2.26
RAB28-201ENST00000288723 TNS3Q68CZ2 1445 aa29.17■■■□□ 2.26
RAB28-201ENST00000288723 ZNF772Q68DY9 489 aaPredicted RBP29.16■■■□□ 2.26
RAB28-201ENST00000288723 NGLY1Q96IV0 654 aa29.15■■■□□ 2.26
RAB28-201ENST00000288723 CCDC61Q9Y6R9 512 aa29.15■■■□□ 2.26
RAB28-201ENST00000288723 SBNO1A3KN83 1393 aa29.15■■■□□ 2.26
RAB28-201ENST00000288723 RALGAPBQ86X10 1494 aa29.15■■■□□ 2.26
RAB28-201ENST00000288723 CABLES1Q8TDN4 633 aa29.13■■■□□ 2.25
RAB28-201ENST00000288723 ITSN1Q15811 1721 aa29.11■■■□□ 2.25
RAB28-201ENST00000288723 PAK3O75914 559 aaPredicted RBP29.1■■■□□ 2.25
RAB28-201ENST00000288723 ACEP12821 1306 aa29.1■■■□□ 2.25
RAB28-201ENST00000288723 CCER1Q8TC90 406 aaPredicted RBP29.09■■■□□ 2.25
RAB28-201ENST00000288723 EVC2Q86UK5 1308 aa29.09■■■□□ 2.25
RAB28-201ENST00000288723 CLSPNQ9HAW4 1339 aa29.09■■■□□ 2.25
RAB28-201ENST00000288723 PLEKHG3A1L390 1219 aa29.08■■■□□ 2.25
RAB28-201ENST00000288723 TOPAZ1Q8N9V7 1692 aa29.08■■■□□ 2.25
RAB28-201ENST00000288723 TRPM3Q9HCF6 1732 aaPredicted RBP29.08■■■□□ 2.25
RAB28-201ENST00000288723 ARHGEF10O15013 1369 aa29.07■■■□□ 2.24
RAB28-201ENST00000288723 PPIP5K1Q6PFW1 1433 aa29.07■■■□□ 2.24
RAB28-201ENST00000288723 HAP1P54257 671 aaPredicted RBP29.06■■■□□ 2.24
RAB28-201ENST00000288723 CABP1Q9NZU7 370 aa29.05■■■□□ 2.24
RAB28-201ENST00000288723 POLR3AO14802 1390 aaPredicted RBP29.05■■■□□ 2.24
RAB28-201ENST00000288723 QTRT2Q9H974 415 aaKnown RBP29.04■■■□□ 2.24
RAB28-201ENST00000288723 USP21Q9UK80 565 aa29.04■■■□□ 2.24
RAB28-201ENST00000288723 FNBP4Q8N3X1 1017 aaPredicted RBP29.02■■■□□ 2.24
RAB28-201ENST00000288723 RXRBP28702 533 aa29.01■■■□□ 2.24
RAB28-201ENST00000288723 ALS2Q96Q42 1657 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms