RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
TSPAN3-201ENST00000267970 CCDC47Q96A33 483 aaKnown RBP20.3■□□□□ 0.84
TSPAN3-201ENST00000267970 CHMP4AQ9BY43 222 aa20.3■□□□□ 0.84
TSPAN3-201ENST00000267970 TRIM5Q9C035 493 aa20.3■□□□□ 0.84
TSPAN3-201ENST00000267970 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
TSPAN3-201ENST00000267970 EFCAB2Q5VUJ9 269 aa20.3■□□□□ 0.84
TSPAN3-201ENST00000267970 MAP4K4O95819 1239 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 ERICH2A1L162 156 aa20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 USP47Q96K76 1375 aa20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 HSP90B2PQ58FF3 399 aa20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-201ENST00000267970 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 FAM177A1Q8N128 213 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 CCDC43Q96MW1 224 aaKnown RBP20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 SDF4Q9BRK5 362 aa20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 HOOK1Q9UJC3 728 aaKnown RBP20.28■□□□□ 0.84
TSPAN3-201ENST00000267970 CCDC39Q9UFE4 941 aa20.27■□□□□ 0.84
TSPAN3-201ENST00000267970 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.84
TSPAN3-201ENST00000267970 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.83
TSPAN3-201ENST00000267970 EPS15P42566 896 aa20.27■□□□□ 0.83
TSPAN3-201ENST00000267970 ODF2Q5BJF6 829 aa20.27■□□□□ 0.83
TSPAN3-201ENST00000267970 STK3Q13188 491 aa20.26■□□□□ 0.83
TSPAN3-201ENST00000267970 RNF20Q5VTR2 975 aa20.26■□□□□ 0.83
TSPAN3-201ENST00000267970 RDXP35241 583 aaKnown RBP20.26■□□□□ 0.83
TSPAN3-201ENST00000267970 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
TSPAN3-201ENST00000267970 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
TSPAN3-201ENST00000267970 NUCB2P80303 420 aa20.25■□□□□ 0.83
TSPAN3-201ENST00000267970 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
TSPAN3-201ENST00000267970 FIBPO43427 364 aa20.25■□□□□ 0.83
TSPAN3-201ENST00000267970 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
TSPAN3-201ENST00000267970 OFD1O75665 1012 aa20.23■□□□□ 0.83
TSPAN3-201ENST00000267970 TSPYL1Q9H0U9 437 aa20.23■□□□□ 0.83
TSPAN3-201ENST00000267970 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
TSPAN3-201ENST00000267970 GGNBP2Q9H3C7 697 aa20.22■□□□□ 0.83
TSPAN3-201ENST00000267970 MRE11P49959 708 aa20.22■□□□□ 0.83
TSPAN3-201ENST00000267970 AXDND1Q5T1B0 1012 aaPredicted RBP20.22■□□□□ 0.83
TSPAN3-201ENST00000267970 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
TSPAN3-201ENST00000267970 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
TSPAN3-201ENST00000267970 SAFBQ15424 915 aaKnown RBP eCLIP20.21■□□□□ 0.83
TSPAN3-201ENST00000267970 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-201ENST00000267970 TSPY26PQ9H489 355 aa20.21■□□□□ 0.83
TSPAN3-201ENST00000267970 EVC2Q86UK5 1308 aa20.2■□□□□ 0.82
TSPAN3-201ENST00000267970 NEK4P51957 841 aa20.2■□□□□ 0.82
TSPAN3-201ENST00000267970 KRI1Q8N9T8 703 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-201ENST00000267970 FAM193AP78312 1265 aa20.2■□□□□ 0.82
TSPAN3-201ENST00000267970 ERICH4A6NGS2 130 aa20.19■□□□□ 0.82
TSPAN3-201ENST00000267970 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
TSPAN3-201ENST00000267970 API5Q9BZZ5 524 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-201ENST00000267970 IKQ13123 557 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-201ENST00000267970 CDC45O75419 566 aa20.18■□□□□ 0.82
TSPAN3-201ENST00000267970 ACBD3Q9H3P7 528 aa20.18■□□□□ 0.82
TSPAN3-201ENST00000267970 LRRFIP1Q32MZ4 808 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-201ENST00000267970 RUNDC1Q96C34 613 aa20.17■□□□□ 0.82
TSPAN3-201ENST00000267970 CABP2Q9NPB3 220 aa20.17■□□□□ 0.82
TSPAN3-201ENST00000267970 IBSPP21815 317 aaPredicted RBP20.16■□□□□ 0.82
TSPAN3-201ENST00000267970 CWC22Q9HCG8 908 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-201ENST00000267970 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
TSPAN3-201ENST00000267970 CENPHQ9H3R5 247 aa20.16■□□□□ 0.82
TSPAN3-201ENST00000267970 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
TSPAN3-201ENST00000267970 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
TSPAN3-201ENST00000267970 CWC15Q9P013 229 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-201ENST00000267970 PSME1Q06323 249 aa20.15■□□□□ 0.82
TSPAN3-201ENST00000267970 NAT10Q9H0A0 1025 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-201ENST00000267970 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
TSPAN3-201ENST00000267970 UBTFL1P0CB47 393 aaPredicted RBP20.14■□□□□ 0.81
TSPAN3-201ENST00000267970 ERC2O15083 957 aa20.14■□□□□ 0.81
TSPAN3-201ENST00000267970 CDR1P51861 262 aa20.14■□□□□ 0.81
TSPAN3-201ENST00000267970 CARMIL2Q6F5E8 1435 aa20.14■□□□□ 0.81
TSPAN3-201ENST00000267970 ANKRD62A6NC57 917 aa20.13■□□□□ 0.81
TSPAN3-201ENST00000267970 BCAR3O75815 825 aa20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 SURF6O75683 361 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 UQCRHLA0A096LP55 91 aa20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 UQCRHP07919 91 aa20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 RBM33Q96EV2 1170 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 MEX3CQ5U5Q3 659 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-201ENST00000267970 SIL1Q9H173 461 aa20.11■□□□□ 0.81
TSPAN3-201ENST00000267970 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
TSPAN3-201ENST00000267970 TMEM132EQ6IEE7 984 aa20.11■□□□□ 0.81
TSPAN3-201ENST00000267970 CCDC66A2RUB6 948 aa20.11■□□□□ 0.81
TSPAN3-201ENST00000267970 TMEM132AQ24JP5 1023 aa20.11■□□□□ 0.81
TSPAN3-201ENST00000267970 CNTROBQ8N137 903 aa20.1■□□□□ 0.81
TSPAN3-201ENST00000267970 NEFHP12036 1026 aa20.1■□□□□ 0.81
TSPAN3-201ENST00000267970 KINO60870 393 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-201ENST00000267970 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
TSPAN3-201ENST00000267970 SERPINC1P01008 464 aa20.1■□□□□ 0.81
TSPAN3-201ENST00000267970 LEKR1Q6ZMV7 388 aa20.1■□□□□ 0.81
TSPAN3-201ENST00000267970 KIF7Q2M1P5 1343 aa20.09■□□□□ 0.81
TSPAN3-201ENST00000267970 ZHX3Q9H4I2 956 aa20.09■□□□□ 0.81
TSPAN3-201ENST00000267970 PRKCSHP14314 528 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-201ENST00000267970 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-201ENST00000267970 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
TSPAN3-201ENST00000267970 ATP2B2Q01814 1243 aa20.08■□□□□ 0.81
TSPAN3-201ENST00000267970 CCDC173Q0VFZ6 552 aa20.08■□□□□ 0.8
TSPAN3-201ENST00000267970 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms