RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 SOS2Q07890 1332 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-201ENST00000262675 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
TTC39A-201ENST00000262675 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
TTC39A-201ENST00000262675 QTRT2Q9H974 415 aaKnown RBP13.8□□□□□ -0.2
TTC39A-201ENST00000262675 COL22A1Q8NFW1 1626 aaPredicted RBP13.8□□□□□ -0.2
TTC39A-201ENST00000262675 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
TTC39A-201ENST00000262675 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
TTC39A-201ENST00000262675 ROBO2Q9HCK4 1378 aa13.79□□□□□ -0.2
TTC39A-201ENST00000262675 FOXD1Q16676 465 aa13.79□□□□□ -0.2
TTC39A-201ENST00000262675 LRPPRCP42704 1394 aaKnown RBP13.78□□□□□ -0.2
TTC39A-201ENST00000262675 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
TTC39A-201ENST00000262675 ANKRD30BQ9BXX2 1392 aa13.76□□□□□ -0.21
TTC39A-201ENST00000262675 RGS12O14924 1447 aa13.76□□□□□ -0.21
TTC39A-201ENST00000262675 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-201ENST00000262675 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
TTC39A-201ENST00000262675 TECPR2O15040 1411 aa13.75□□□□□ -0.21
TTC39A-201ENST00000262675 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
TTC39A-201ENST00000262675 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
TTC39A-201ENST00000262675 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
TTC39A-201ENST00000262675 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
TTC39A-201ENST00000262675 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
TTC39A-201ENST00000262675 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
TTC39A-201ENST00000262675 USP21Q9UK80 565 aa13.73□□□□□ -0.21
TTC39A-201ENST00000262675 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
TTC39A-201ENST00000262675 RAB3GAP2Q9H2M9 1393 aa13.73□□□□□ -0.21
TTC39A-201ENST00000262675 ADAMTS2O95450 1211 aa13.73□□□□□ -0.21
TTC39A-201ENST00000262675 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
TTC39A-201ENST00000262675 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
TTC39A-201ENST00000262675 MYOM2P54296 1465 aa13.72□□□□□ -0.21
TTC39A-201ENST00000262675 ATRNO75882 1429 aa13.72□□□□□ -0.21
TTC39A-201ENST00000262675 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
TTC39A-201ENST00000262675 PXDNQ92626 1479 aa13.71□□□□□ -0.21
TTC39A-201ENST00000262675 ESCO1Q5FWF5 840 aa13.71□□□□□ -0.22
TTC39A-201ENST00000262675 SIRT1Q96EB6 747 aa13.71□□□□□ -0.22
TTC39A-201ENST00000262675 SPATA31E1Q6ZUB1 1445 aa13.7□□□□□ -0.22
TTC39A-201ENST00000262675 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
TTC39A-201ENST00000262675 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
TTC39A-201ENST00000262675 MIER1Q8N108 512 aa13.69□□□□□ -0.22
TTC39A-201ENST00000262675 FMN2Q9NZ56 1722 aa13.68□□□□□ -0.22
TTC39A-201ENST00000262675 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
TTC39A-201ENST00000262675 ADGRF5Q8IZF2 1346 aa13.67□□□□□ -0.22
TTC39A-201ENST00000262675 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
TTC39A-201ENST00000262675 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
TTC39A-201ENST00000262675 YTHDC2Q9H6S0 1430 aaKnown RBP13.65□□□□□ -0.22
TTC39A-201ENST00000262675 FOXO3O43524 673 aa13.65□□□□□ -0.22
TTC39A-201ENST00000262675 BCL9LQ86UU0 1499 aa13.65□□□□□ -0.22
TTC39A-201ENST00000262675 PSME1Q06323 249 aa13.64□□□□□ -0.23
TTC39A-201ENST00000262675 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
TTC39A-201ENST00000262675 STK26Q9P289 416 aa13.64□□□□□ -0.23
TTC39A-201ENST00000262675 SPATA31A3Q5VYP0 1347 aa13.63□□□□□ -0.23
TTC39A-201ENST00000262675 GJD4Q96KN9 370 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-201ENST00000262675 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
TTC39A-201ENST00000262675 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
TTC39A-201ENST00000262675 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
TTC39A-201ENST00000262675 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
TTC39A-201ENST00000262675 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
TTC39A-201ENST00000262675 SLIT2O94813 1529 aa13.62□□□□□ -0.23
TTC39A-201ENST00000262675 USP32Q8NFA0 1604 aa13.61□□□□□ -0.23
TTC39A-201ENST00000262675 SBNO1A3KN83 1393 aa13.61□□□□□ -0.23
TTC39A-201ENST00000262675 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
TTC39A-201ENST00000262675 DLC1Q96QB1 1528 aa13.61□□□□□ -0.23
TTC39A-201ENST00000262675 NWD2Q9ULI1 1742 aa13.61□□□□□ -0.23
TTC39A-201ENST00000262675 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
TTC39A-201ENST00000262675 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
TTC39A-201ENST00000262675 ANKARQ7Z5J8 1434 aa13.6□□□□□ -0.23
TTC39A-201ENST00000262675 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
TTC39A-201ENST00000262675 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
TTC39A-201ENST00000262675 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
TTC39A-201ENST00000262675 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
TTC39A-201ENST00000262675 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-201ENST00000262675 XPCQ01831 940 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-201ENST00000262675 STAC3Q96MF2 364 aa13.58□□□□□ -0.24
TTC39A-201ENST00000262675 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
TTC39A-201ENST00000262675 ADGRB2O60241 1585 aa13.58□□□□□ -0.24
TTC39A-201ENST00000262675 BLMP54132 1417 aaPredicted RBP13.57□□□□□ -0.24
TTC39A-201ENST00000262675 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
TTC39A-201ENST00000262675 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-201ENST00000262675 GLI3P10071 1580 aa13.56□□□□□ -0.24
TTC39A-201ENST00000262675 VPS72Q15906 364 aa13.56□□□□□ -0.24
TTC39A-201ENST00000262675 PLCH1Q4KWH8 1693 aa13.56□□□□□ -0.24
TTC39A-201ENST00000262675 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
TTC39A-201ENST00000262675 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
TTC39A-201ENST00000262675 POGKQ9P215 609 aa13.54□□□□□ -0.24
TTC39A-201ENST00000262675 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
TTC39A-201ENST00000262675 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
TTC39A-201ENST00000262675 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-201ENST00000262675 CFAP70Q5T0N1 1121 aa13.53□□□□□ -0.24
TTC39A-201ENST00000262675 BRWD3Q6RI45 1802 aa13.52□□□□□ -0.24
TTC39A-201ENST00000262675 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.25
TTC39A-201ENST00000262675 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
TTC39A-201ENST00000262675 ADGRB1O14514 1584 aa13.51□□□□□ -0.25
TTC39A-201ENST00000262675 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
TTC39A-201ENST00000262675 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-201ENST00000262675 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
TTC39A-201ENST00000262675 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
TTC39A-201ENST00000262675 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
TTC39A-201ENST00000262675 CCDC9Q9Y3X0 531 aaKnown RBP13.49□□□□□ -0.25
TTC39A-201ENST00000262675 ITSN1Q15811 1721 aa13.49□□□□□ -0.25
TTC39A-201ENST00000262675 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
TTC39A-201ENST00000262675 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms