RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 L3MBTL2Q969R5 705 aa30.65■■■□□ 2.5
CCNE1-201ENST00000262643 TRAK1Q9UPV9 953 aa30.65■■■□□ 2.5
CCNE1-201ENST00000262643 SIRT1Q96EB6 747 aa30.64■■■□□ 2.5
CCNE1-201ENST00000262643 PRAM1Q96QH2 718 aa30.64■■■□□ 2.5
CCNE1-201ENST00000262643 C1orf167Q5SNV9 1468 aa30.64■■■□□ 2.5
CCNE1-201ENST00000262643 CDC42BPGQ6DT37 1551 aa30.63■■■□□ 2.49
CCNE1-201ENST00000262643 POGKQ9P215 609 aa30.62■■■□□ 2.49
CCNE1-201ENST00000262643 MED1Q15648 1581 aaPredicted RBP30.61■■■□□ 2.49
CCNE1-201ENST00000262643 AHDC1Q5TGY3 1603 aaPredicted RBP30.6■■■□□ 2.49
CCNE1-201ENST00000262643 COL16A1Q07092 1604 aaPredicted RBP30.6■■■□□ 2.49
CCNE1-201ENST00000262643 NUTM2FA1L443 756 aa30.59■■■□□ 2.49
CCNE1-201ENST00000262643 ORAI2Q96SN7 254 aa30.59■■■□□ 2.49
CCNE1-201ENST00000262643 DLC1Q96QB1 1528 aa30.59■■■□□ 2.49
CCNE1-201ENST00000262643 DDX17Q92841 729 aaKnown RBP30.58■■■□□ 2.49
CCNE1-201ENST00000262643 NBPF1Q3BBV0 1214 aa30.54■■■□□ 2.48
CCNE1-201ENST00000262643 KIAA1210Q9ULL0 1709 aa30.54■■■□□ 2.48
CCNE1-201ENST00000262643 ESCO1Q5FWF5 840 aa30.54■■■□□ 2.48
CCNE1-201ENST00000262643 NHSL1Q5SYE7 1610 aa30.53■■■□□ 2.48
CCNE1-201ENST00000262643 JCADQ9P266 1359 aa30.53■■■□□ 2.48
CCNE1-201ENST00000262643 FMN2Q9NZ56 1722 aa30.5■■■□□ 2.47
CCNE1-201ENST00000262643 HIRIP3Q9BW71 556 aaPredicted RBP30.5■■■□□ 2.47
CCNE1-201ENST00000262643 CLSPNQ9HAW4 1339 aa30.49■■■□□ 2.47
CCNE1-201ENST00000262643 MINK1Q8N4C8 1332 aaPredicted RBP30.49■■■□□ 2.47
CCNE1-201ENST00000262643 ARHGEF28Q8N1W1 1705 aaKnown RBP30.48■■■□□ 2.47
CCNE1-201ENST00000262643 PHF23Q9BUL5 403 aaPredicted RBP30.47■■■□□ 2.47
CCNE1-201ENST00000262643 TONSLQ96HA7 1378 aa30.45■■■□□ 2.46
CCNE1-201ENST00000262643 LRRC59Q96AG4 307 aaKnown RBP30.43■■■□□ 2.46
CCNE1-201ENST00000262643 RGPD8O14715 1765 aaPredicted RBP30.42■■■□□ 2.46
CCNE1-201ENST00000262643 ADGRB2O60241 1585 aa30.42■■■□□ 2.46
CCNE1-201ENST00000262643 FOXO3O43524 673 aa30.42■■■□□ 2.46
CCNE1-201ENST00000262643 SHPRHQ149N8 1683 aa30.41■■■□□ 2.46
CCNE1-201ENST00000262643 ILDR2Q71H61 639 aa30.4■■■□□ 2.46
CCNE1-201ENST00000262643 TRPM1Q7Z4N2 1603 aa30.4■■■□□ 2.46
CCNE1-201ENST00000262643 SOS2Q07890 1332 aaPredicted RBP30.39■■■□□ 2.46
CCNE1-201ENST00000262643 NPHP3Q7Z494 1330 aa30.39■■■□□ 2.46
CCNE1-201ENST00000262643 XPCQ01831 940 aaPredicted RBP30.39■■■□□ 2.45
CCNE1-201ENST00000262643 SPATA31A6Q5VVP1 1343 aa30.38■■■□□ 2.45
CCNE1-201ENST00000262643 NBPF8Q3BBV2 869 aa30.37■■■□□ 2.45
CCNE1-201ENST00000262643 WASLO00401 505 aaPredicted RBP30.36■■■□□ 2.45
CCNE1-201ENST00000262643 ROCK2O75116 1388 aaKnown RBP30.36■■■□□ 2.45
CCNE1-201ENST00000262643 NUTM2BA6NNL0 878 aaPredicted RBP30.35■■■□□ 2.45
CCNE1-201ENST00000262643 NUTM2EB1AL46 878 aaPredicted RBP30.35■■■□□ 2.45
CCNE1-201ENST00000262643 NUTM2AQ8IVF1 878 aaPredicted RBP30.35■■■□□ 2.45
CCNE1-201ENST00000262643 PHF8Q9UPP1 1060 aa30.34■■■□□ 2.45
CCNE1-201ENST00000262643 LRP6O75581 1613 aa30.33■■■□□ 2.45
CCNE1-201ENST00000262643 USP32Q8NFA0 1604 aa30.33■■■□□ 2.45
CCNE1-201ENST00000262643 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
CCNE1-201ENST00000262643 KIF1AQ12756 1690 aa30.33■■■□□ 2.45
CCNE1-201ENST00000262643 ANKARQ7Z5J8 1434 aa30.33■■■□□ 2.45
CCNE1-201ENST00000262643 PXDNQ92626 1479 aa30.32■■■□□ 2.44
CCNE1-201ENST00000262643 MEX3CQ5U5Q3 659 aaKnown RBP30.31■■■□□ 2.44
CCNE1-201ENST00000262643 EIF3AQ14152 1382 aaKnown RBP30.31■■■□□ 2.44
CCNE1-201ENST00000262643 CENPJQ9HC77 1338 aaPredicted RBP30.31■■■□□ 2.44
CCNE1-201ENST00000262643 PMFBP1Q8TBY8 1022 aa30.3■■■□□ 2.44
CCNE1-201ENST00000262643 TULP4Q9NRJ4 1543 aa30.3■■■□□ 2.44
CCNE1-201ENST00000262643 PRR36Q9H6K5 1346 aa30.29■■■□□ 2.44
CCNE1-201ENST00000262643 RGS17Q9UGC6 210 aaPredicted RBP30.28■■■□□ 2.44
CCNE1-201ENST00000262643 CDK19Q9BWU1 502 aa30.27■■■□□ 2.44
CCNE1-201ENST00000262643 KRT28Q7Z3Y7 464 aa30.25■■■□□ 2.43
CCNE1-201ENST00000262643 QRICH2Q9H0J4 1663 aa30.24■■■□□ 2.43
CCNE1-201ENST00000262643 PSME1Q06323 249 aa30.23■■■□□ 2.43
CCNE1-201ENST00000262643 NUDT16Q96DE0 195 aaKnown RBP30.23■■■□□ 2.43
CCNE1-201ENST00000262643 CARD11Q9BXL7 1154 aa30.22■■■□□ 2.43
CCNE1-201ENST00000262643 ATP7BP35670 1465 aa30.21■■■□□ 2.43
CCNE1-201ENST00000262643 GPRASP1Q5JY77 1395 aa30.21■■■□□ 2.43
CCNE1-201ENST00000262643 RALGAPBQ86X10 1494 aa30.2■■■□□ 2.42
CCNE1-201ENST00000262643 SPATA31A3Q5VYP0 1347 aa30.18■■■□□ 2.42
CCNE1-201ENST00000262643 ADAMTS2O95450 1211 aa30.18■■■□□ 2.42
CCNE1-201ENST00000262643 SRPK2P78362 688 aaKnown RBP30.18■■■□□ 2.42
CCNE1-201ENST00000262643 NGDNQ8NEJ9 315 aaKnown RBP30.17■■■□□ 2.42
CCNE1-201ENST00000262643 ITSN1Q15811 1721 aa30.17■■■□□ 2.42
CCNE1-201ENST00000262643 COL22A1Q8NFW1 1626 aaPredicted RBP30.16■■■□□ 2.42
CCNE1-201ENST00000262643 LMOD2Q6P5Q4 547 aa30.15■■■□□ 2.42
CCNE1-201ENST00000262643 POTEAQ6S8J7 498 aa30.15■■■□□ 2.42
CCNE1-201ENST00000262643 C8orf37Q96NL8 207 aa30.15■■■□□ 2.42
CCNE1-201ENST00000262643 CABP2Q9NPB3 220 aa30.15■■■□□ 2.42
CCNE1-201ENST00000262643 TNS3Q68CZ2 1445 aa30.13■■■□□ 2.41
CCNE1-201ENST00000262643 CCDC61Q9Y6R9 512 aa30.13■■■□□ 2.41
CCNE1-201ENST00000262643 PLEKHG5O94827 1062 aa30.12■■■□□ 2.41
CCNE1-201ENST00000262643 SBNO1A3KN83 1393 aa30.11■■■□□ 2.41
CCNE1-201ENST00000262643 TOPAZ1Q8N9V7 1692 aa30.1■■■□□ 2.41
CCNE1-201ENST00000262643 EVC2Q86UK5 1308 aa30.09■■■□□ 2.41
CCNE1-201ENST00000262643 AFF2P51816 1311 aa30.08■■■□□ 2.41
CCNE1-201ENST00000262643 ZNF772Q68DY9 489 aaPredicted RBP30.07■■■□□ 2.4
CCNE1-201ENST00000262643 NGLY1Q96IV0 654 aa30.07■■■□□ 2.4
CCNE1-201ENST00000262643 PAK3O75914 559 aaPredicted RBP30.06■■■□□ 2.4
CCNE1-201ENST00000262643 TRPM3Q9HCF6 1732 aaPredicted RBP30.06■■■□□ 2.4
CCNE1-201ENST00000262643 ACEP12821 1306 aa30.06■■■□□ 2.4
CCNE1-201ENST00000262643 PPIP5K1Q6PFW1 1433 aa30.05■■■□□ 2.4
CCNE1-201ENST00000262643 ARHGEF10O15013 1369 aa30.05■■■□□ 2.4
CCNE1-201ENST00000262643 CABLES1Q8TDN4 633 aa30.05■■■□□ 2.4
CCNE1-201ENST00000262643 TIMELESSQ9UNS1 1208 aa30.05■■■□□ 2.4
CCNE1-201ENST00000262643 PLEKHG3A1L390 1219 aa30.04■■■□□ 2.4
CCNE1-201ENST00000262643 SOCS7O14512 581 aa30.04■■■□□ 2.4
CCNE1-201ENST00000262643 HAP1P54257 671 aaPredicted RBP30.03■■■□□ 2.4
CCNE1-201ENST00000262643 POLR3AO14802 1390 aaPredicted RBP30.03■■■□□ 2.4
CCNE1-201ENST00000262643 CABP1Q9NZU7 370 aa30■■■□□ 2.39
CCNE1-201ENST00000262643 ALS2Q96Q42 1657 aa29.99■■■□□ 2.39
CCNE1-201ENST00000262643 SBNO2Q9Y2G9 1366 aa29.99■■■□□ 2.39
CCNE1-201ENST00000262643 MARF1Q9Y4F3 1742 aaKnown RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms