RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TSC1Q92574 1164 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 PLEKHH2Q8IVE3 1493 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 ERBINQ96RT1 1412 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
VSX2-201ENST00000261980 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
VSX2-201ENST00000261980 RARSP54136 660 aaKnown RBP20.7■□□□□ 0.9
VSX2-201ENST00000261980 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
VSX2-201ENST00000261980 GBP4Q96PP9 640 aa20.7■□□□□ 0.9
VSX2-201ENST00000261980 OFD1O75665 1012 aa20.7■□□□□ 0.9
VSX2-201ENST00000261980 ASXL2Q76L83 1435 aa20.7■□□□□ 0.9
VSX2-201ENST00000261980 AAMPQ13685 434 aa20.69■□□□□ 0.9
VSX2-201ENST00000261980 CHAMP1Q96JM3 812 aa20.69■□□□□ 0.9
VSX2-201ENST00000261980 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
VSX2-201ENST00000261980 CAVIN1Q6NZI2 390 aaKnown RBP20.68■□□□□ 0.9
VSX2-201ENST00000261980 MAGI2Q86UL8 1455 aa20.68■□□□□ 0.9
VSX2-201ENST00000261980 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 TPRNQ4KMQ1 711 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 CROCC2H7BZ55 1655 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 CCDC173Q0VFZ6 552 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 AFAP1Q8N556 730 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 PLCH2O75038 1416 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 ADGRL2O95490 1459 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 WDR7Q9Y4E6 1490 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 FOXD4L5Q5VV16 416 aaPredicted RBP20.66■□□□□ 0.9
VSX2-201ENST00000261980 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.66■□□□□ 0.9
VSX2-201ENST00000261980 FOXD4L4Q8WXT5 416 aaPredicted RBP20.66■□□□□ 0.9
VSX2-201ENST00000261980 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 ITPRIPQ8IWB1 547 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 MCTP1Q6DN14 999 aa20.64■□□□□ 0.89
VSX2-201ENST00000261980 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
VSX2-201ENST00000261980 E9PCH4 1651 aa20.63■□□□□ 0.89
VSX2-201ENST00000261980 RNF214Q8ND24 703 aa20.63■□□□□ 0.89
VSX2-201ENST00000261980 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
VSX2-201ENST00000261980 TSR2Q969E8 191 aaKnown RBP20.62■□□□□ 0.89
VSX2-201ENST00000261980 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
VSX2-201ENST00000261980 SHANK2Q9UPX8 1470 aa20.61■□□□□ 0.89
VSX2-201ENST00000261980 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
VSX2-201ENST00000261980 IGSF3O75054 1194 aa20.6■□□□□ 0.89
VSX2-201ENST00000261980 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
VSX2-201ENST00000261980 ARHGEF5Q12774 1597 aa20.59■□□□□ 0.89
VSX2-201ENST00000261980 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
VSX2-201ENST00000261980 DNTTIP2Q5QJE6 756 aaKnown RBP20.59■□□□□ 0.89
VSX2-201ENST00000261980 TCP11L2Q8N4U5 519 aa20.59■□□□□ 0.89
VSX2-201ENST00000261980 RBSNQ9H1K0 784 aa20.58■□□□□ 0.89
VSX2-201ENST00000261980 RTEL1-TNFRSF6BF6WH68 1400 aa20.58■□□□□ 0.89
VSX2-201ENST00000261980 PKP1Q13835 747 aa20.58■□□□□ 0.89
VSX2-201ENST00000261980 CBX1P83916 185 aa20.57■□□□□ 0.88
VSX2-201ENST00000261980 GOLGA6L22H0YM25 854 aa20.57■□□□□ 0.88
VSX2-201ENST00000261980 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
VSX2-201ENST00000261980 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
VSX2-201ENST00000261980 PPP1R9BQ96SB3 815 aa20.56■□□□□ 0.88
VSX2-201ENST00000261980 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
VSX2-201ENST00000261980 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 RAPGEF3O95398 923 aa20.55■□□□□ 0.88
VSX2-201ENST00000261980 SKOR2Q2VWA4 1001 aaPredicted RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
VSX2-201ENST00000261980 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 DDIT3P35638 169 aa20.54■□□□□ 0.88
VSX2-201ENST00000261980 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
VSX2-201ENST00000261980 FANCAO15360 1455 aa20.54■□□□□ 0.88
VSX2-201ENST00000261980 INSRP06213 1382 aa20.54■□□□□ 0.88
VSX2-201ENST00000261980 BAG4O95429 457 aaKnown RBP20.54■□□□□ 0.88
VSX2-201ENST00000261980 SMC5Q8IY18 1101 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 C1orf115Q9H7X2 142 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 ZSCAN23Q3MJ62 389 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 PRPF40AO75400 957 aaKnown RBP20.52■□□□□ 0.87
VSX2-201ENST00000261980 PTMAP06454 111 aaKnown RBP20.52■□□□□ 0.87
VSX2-201ENST00000261980 FGD1P98174 961 aa20.52■□□□□ 0.87
VSX2-201ENST00000261980 ZNF830Q96NB3 372 aaPredicted RBP20.52■□□□□ 0.87
VSX2-201ENST00000261980 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
VSX2-201ENST00000261980 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
VSX2-201ENST00000261980 C17orf53Q8N3J3 647 aaPredicted RBP20.5■□□□□ 0.87
VSX2-201ENST00000261980 CARD14Q9BXL6 1004 aa20.5■□□□□ 0.87
VSX2-201ENST00000261980 ABCC1P33527 1531 aa20.5■□□□□ 0.87
VSX2-201ENST00000261980 A2MP01023 1474 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 K7ELQ4 463 aaPredicted RBP20.49■□□□□ 0.87
VSX2-201ENST00000261980 TRIM27P14373 513 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
VSX2-201ENST00000261980 SYCE3A1L190 88 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 KIF2CQ99661 725 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 NOL7Q9UMY1 257 aaKnown RBP20.49■□□□□ 0.87
VSX2-201ENST00000261980 SPDYE4A6NLX3 237 aa20.48■□□□□ 0.87
VSX2-201ENST00000261980 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
VSX2-201ENST00000261980 KLHL40Q2TBA0 621 aa20.48■□□□□ 0.87
VSX2-201ENST00000261980 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
VSX2-201ENST00000261980 KDM5DQ9BY66 1539 aa20.47■□□□□ 0.87
VSX2-201ENST00000261980 BBXQ8WY36 941 aaPredicted RBP20.46■□□□□ 0.87
VSX2-201ENST00000261980 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms