RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
PSMC1-201ENST00000261303 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
PSMC1-201ENST00000261303 CHAF1AQ13111 956 aaPredicted RBP17.34■□□□□ 0.37
PSMC1-201ENST00000261303 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
PSMC1-201ENST00000261303 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.37
PSMC1-201ENST00000261303 CSPP1Q1MSJ5 1256 aa17.33■□□□□ 0.37
PSMC1-201ENST00000261303 DIAPH3Q9NSV4 1193 aa17.33■□□□□ 0.37
PSMC1-201ENST00000261303 CD109Q6YHK3 1445 aa17.33■□□□□ 0.36
PSMC1-201ENST00000261303 GSE1Q14687 1217 aa17.33■□□□□ 0.36
PSMC1-201ENST00000261303 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
PSMC1-201ENST00000261303 C22orf23Q9BZE7 217 aa17.32■□□□□ 0.36
PSMC1-201ENST00000261303 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
PSMC1-201ENST00000261303 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
PSMC1-201ENST00000261303 RUFY2Q8WXA3 655 aa17.32■□□□□ 0.36
PSMC1-201ENST00000261303 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
PSMC1-201ENST00000261303 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
PSMC1-201ENST00000261303 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
PSMC1-201ENST00000261303 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
PSMC1-201ENST00000261303 EVA1CP58658 441 aa17.31■□□□□ 0.36
PSMC1-201ENST00000261303 ABTB2Q8N961 1025 aa17.31■□□□□ 0.36
PSMC1-201ENST00000261303 KIF3AQ9Y496 699 aa17.31■□□□□ 0.36
PSMC1-201ENST00000261303 KIAA2012Q0VF49 1180 aa17.31■□□□□ 0.36
PSMC1-201ENST00000261303 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
PSMC1-201ENST00000261303 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
PSMC1-201ENST00000261303 ADGRL1O94910 1474 aa17.31■□□□□ 0.36
PSMC1-201ENST00000261303 RTEL1-TNFRSF6BF6WH68 1400 aa17.3■□□□□ 0.36
PSMC1-201ENST00000261303 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
PSMC1-201ENST00000261303 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
PSMC1-201ENST00000261303 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
PSMC1-201ENST00000261303 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
PSMC1-201ENST00000261303 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
PSMC1-201ENST00000261303 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
PSMC1-201ENST00000261303 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
PSMC1-201ENST00000261303 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
PSMC1-201ENST00000261303 SKOR2Q2VWA4 1001 aaPredicted RBP17.29■□□□□ 0.36
PSMC1-201ENST00000261303 ANO2Q9NQ90 1003 aa17.29■□□□□ 0.36
PSMC1-201ENST00000261303 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
PSMC1-201ENST00000261303 ATF3P18847 181 aa17.28■□□□□ 0.36
PSMC1-201ENST00000261303 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
PSMC1-201ENST00000261303 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
PSMC1-201ENST00000261303 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
PSMC1-201ENST00000261303 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
PSMC1-201ENST00000261303 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.36
PSMC1-201ENST00000261303 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.36
PSMC1-201ENST00000261303 ZKSCAN1P17029 563 aaPredicted RBP17.27■□□□□ 0.35
PSMC1-201ENST00000261303 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.35
PSMC1-201ENST00000261303 GPRASP1Q5JY77 1395 aa17.27■□□□□ 0.35
PSMC1-201ENST00000261303 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.35
PSMC1-201ENST00000261303 PHF14O94880 888 aa17.26■□□□□ 0.35
PSMC1-201ENST00000261303 GNAI3P08754 354 aa17.26■□□□□ 0.35
PSMC1-201ENST00000261303 G3BP1Q13283 466 aaKnown RBP eCLIP17.26■□□□□ 0.35
PSMC1-201ENST00000261303 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
PSMC1-201ENST00000261303 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
PSMC1-201ENST00000261303 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
PSMC1-201ENST00000261303 NOB1Q9ULX3 412 aaKnown RBP17.26■□□□□ 0.35
PSMC1-201ENST00000261303 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
PSMC1-201ENST00000261303 FCHSD2O94868 740 aa17.26■□□□□ 0.35
PSMC1-201ENST00000261303 ATP10BO94823 1461 aa17.26■□□□□ 0.35
PSMC1-201ENST00000261303 CCDC30Q5VVM6 783 aa17.25■□□□□ 0.35
PSMC1-201ENST00000261303 CDC45O75419 566 aa17.25■□□□□ 0.35
PSMC1-201ENST00000261303 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
PSMC1-201ENST00000261303 IDI1Q13907 227 aa17.23■□□□□ 0.35
PSMC1-201ENST00000261303 LRRFIP1Q32MZ4 808 aaKnown RBP17.23■□□□□ 0.35
PSMC1-201ENST00000261303 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
PSMC1-201ENST00000261303 TMPOP42166 694 aaKnown RBP17.23■□□□□ 0.35
PSMC1-201ENST00000261303 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
PSMC1-201ENST00000261303 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
PSMC1-201ENST00000261303 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
PSMC1-201ENST00000261303 ZNF428Q96B54 188 aa17.22■□□□□ 0.35
PSMC1-201ENST00000261303 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
PSMC1-201ENST00000261303 RAPGEF6Q8TEU7 1601 aa17.22■□□□□ 0.35
PSMC1-201ENST00000261303 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
PSMC1-201ENST00000261303 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
PSMC1-201ENST00000261303 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
PSMC1-201ENST00000261303 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
PSMC1-201ENST00000261303 CCDC34Q96HJ3 373 aa17.21■□□□□ 0.35
PSMC1-201ENST00000261303 FANCAO15360 1455 aa17.21■□□□□ 0.35
PSMC1-201ENST00000261303 ERC2O15083 957 aa17.21■□□□□ 0.35
PSMC1-201ENST00000261303 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
PSMC1-201ENST00000261303 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
PSMC1-201ENST00000261303 RIC3Q7Z5B4 369 aa17.21■□□□□ 0.35
PSMC1-201ENST00000261303 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
PSMC1-201ENST00000261303 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
PSMC1-201ENST00000261303 FAM184AQ8NB25 1140 aa17.2■□□□□ 0.34
PSMC1-201ENST00000261303 SCAF11Q99590 1463 aaKnown RBP17.2■□□□□ 0.34
PSMC1-201ENST00000261303 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
PSMC1-201ENST00000261303 AIMP1Q12904 312 aaKnown RBP17.2■□□□□ 0.34
PSMC1-201ENST00000261303 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
PSMC1-201ENST00000261303 SF3A1Q15459 793 aaKnown RBP17.2■□□□□ 0.34
PSMC1-201ENST00000261303 NUCB2P80303 420 aa17.19■□□□□ 0.34
PSMC1-201ENST00000261303 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
PSMC1-201ENST00000261303 C1orf115Q9H7X2 142 aa17.19■□□□□ 0.34
PSMC1-201ENST00000261303 H3BQV1 296 aa17.19■□□□□ 0.34
PSMC1-201ENST00000261303 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
PSMC1-201ENST00000261303 RNF20Q5VTR2 975 aa17.19■□□□□ 0.34
PSMC1-201ENST00000261303 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
PSMC1-201ENST00000261303 SURF6O75683 361 aaKnown RBP17.18■□□□□ 0.34
PSMC1-201ENST00000261303 NFE2L2Q16236 605 aa17.18■□□□□ 0.34
PSMC1-201ENST00000261303 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
PSMC1-201ENST00000261303 CLASRPQ8N2M8 674 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms