RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
RIPK1-201ENST00000259808 IGHDP01880 384 aa18.74■□□□□ 0.59
RIPK1-201ENST00000259808 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.74■□□□□ 0.59
RIPK1-201ENST00000259808 TNNQ9UQP3 1299 aa18.74■□□□□ 0.59
RIPK1-201ENST00000259808 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
RIPK1-201ENST00000259808 KIF16BQ96L93 1317 aa18.73■□□□□ 0.59
RIPK1-201ENST00000259808 MIS18AQ9NYP9 233 aa18.72■□□□□ 0.59
RIPK1-201ENST00000259808 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
RIPK1-201ENST00000259808 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.59
RIPK1-201ENST00000259808 KIAA2012Q0VF49 1180 aa18.71■□□□□ 0.59
RIPK1-201ENST00000259808 API5Q9BZZ5 524 aaKnown RBP18.71■□□□□ 0.59
RIPK1-201ENST00000259808 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
RIPK1-201ENST00000259808 GNAI1P63096 354 aa18.71■□□□□ 0.59
RIPK1-201ENST00000259808 TMEM57Q8N5G2 664 aa18.71■□□□□ 0.59
RIPK1-201ENST00000259808 TWISTNBQ3B726 338 aaPredicted RBP18.71■□□□□ 0.58
RIPK1-201ENST00000259808 CUL7Q14999 1698 aa18.7■□□□□ 0.58
RIPK1-201ENST00000259808 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
RIPK1-201ENST00000259808 ATF7IPQ6VMQ6 1270 aa18.7■□□□□ 0.58
RIPK1-201ENST00000259808 TEFQ10587 303 aa18.69■□□□□ 0.58
RIPK1-201ENST00000259808 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
RIPK1-201ENST00000259808 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
RIPK1-201ENST00000259808 CDK19Q9BWU1 502 aa18.69■□□□□ 0.58
RIPK1-201ENST00000259808 FOSBP53539 338 aa18.69■□□□□ 0.58
RIPK1-201ENST00000259808 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
RIPK1-201ENST00000259808 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
RIPK1-201ENST00000259808 PLEKHH2Q8IVE3 1493 aa18.68■□□□□ 0.58
RIPK1-201ENST00000259808 AIMP1Q12904 312 aaKnown RBP18.68■□□□□ 0.58
RIPK1-201ENST00000259808 NPHP1O15259 732 aa18.67■□□□□ 0.58
RIPK1-201ENST00000259808 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
RIPK1-201ENST00000259808 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
RIPK1-201ENST00000259808 GPATCH8Q9UKJ3 1502 aaKnown RBP18.67■□□□□ 0.58
RIPK1-201ENST00000259808 NUP153P49790 1475 aaKnown RBP18.67■□□□□ 0.58
RIPK1-201ENST00000259808 GORABQ5T7V8 394 aa18.67■□□□□ 0.58
RIPK1-201ENST00000259808 VSIG10Q8N0Z9 540 aa18.67■□□□□ 0.58
RIPK1-201ENST00000259808 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
RIPK1-201ENST00000259808 CAVIN1Q6NZI2 390 aaKnown RBP18.67■□□□□ 0.58
RIPK1-201ENST00000259808 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
RIPK1-201ENST00000259808 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
RIPK1-201ENST00000259808 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
RIPK1-201ENST00000259808 C9orf78Q9NZ63 289 aaPredicted RBP18.66■□□□□ 0.58
RIPK1-201ENST00000259808 NLRP6P59044 892 aa18.66■□□□□ 0.58
RIPK1-201ENST00000259808 TMPOP42166 694 aaKnown RBP18.65■□□□□ 0.58
RIPK1-201ENST00000259808 ATP10BO94823 1461 aa18.65■□□□□ 0.58
RIPK1-201ENST00000259808 MAP3K1Q13233 1512 aa18.65■□□□□ 0.58
RIPK1-201ENST00000259808 NEK4P51957 841 aa18.65■□□□□ 0.58
RIPK1-201ENST00000259808 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
RIPK1-201ENST00000259808 REC8O95072 547 aa18.64■□□□□ 0.57
RIPK1-201ENST00000259808 MAP4K4O95819 1239 aaPredicted RBP18.64■□□□□ 0.57
RIPK1-201ENST00000259808 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
RIPK1-201ENST00000259808 FBXW7Q969H0 707 aa18.64■□□□□ 0.57
RIPK1-201ENST00000259808 GNL2Q13823 731 aaKnown RBP18.64■□□□□ 0.57
RIPK1-201ENST00000259808 SYAP1Q96A49 352 aaPredicted RBP18.64■□□□□ 0.57
RIPK1-201ENST00000259808 RBM33Q96EV2 1170 aaKnown RBP18.64■□□□□ 0.57
RIPK1-201ENST00000259808 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
RIPK1-201ENST00000259808 FAM13BQ9NYF5 915 aa18.64■□□□□ 0.57
RIPK1-201ENST00000259808 DIAPH3Q9NSV4 1193 aa18.63■□□□□ 0.57
RIPK1-201ENST00000259808 PRPF40AO75400 957 aaKnown RBP18.62■□□□□ 0.57
RIPK1-201ENST00000259808 CCDC27Q2M243 656 aa18.62■□□□□ 0.57
RIPK1-201ENST00000259808 CDC45O75419 566 aa18.61■□□□□ 0.57
RIPK1-201ENST00000259808 INTS3Q68E01 1043 aaKnown RBP18.61■□□□□ 0.57
RIPK1-201ENST00000259808 SMARCA5O60264 1052 aaPredicted RBP18.6■□□□□ 0.57
RIPK1-201ENST00000259808 PCDHB15Q9Y5E8 787 aa18.6■□□□□ 0.57
RIPK1-201ENST00000259808 SURF6O75683 361 aaKnown RBP18.6■□□□□ 0.57
RIPK1-201ENST00000259808 RSPH6AQ9H0K4 717 aa18.6■□□□□ 0.57
RIPK1-201ENST00000259808 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
RIPK1-201ENST00000259808 MCM10Q7L590 875 aa18.59■□□□□ 0.57
RIPK1-201ENST00000259808 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
RIPK1-201ENST00000259808 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
RIPK1-201ENST00000259808 CHD1LQ86WJ1 897 aa18.59■□□□□ 0.57
RIPK1-201ENST00000259808 WDR63Q8IWG1 891 aa18.59■□□□□ 0.57
RIPK1-201ENST00000259808 TOMM22Q9NS69 142 aa18.59■□□□□ 0.57
RIPK1-201ENST00000259808 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
RIPK1-201ENST00000259808 PTMSP20962 102 aa18.58■□□□□ 0.56
RIPK1-201ENST00000259808 MCM4P33991 863 aa18.58■□□□□ 0.56
RIPK1-201ENST00000259808 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.56
RIPK1-201ENST00000259808 IDI1Q13907 227 aa18.58■□□□□ 0.56
RIPK1-201ENST00000259808 GPATCH3Q96I76 525 aa18.58■□□□□ 0.56
RIPK1-201ENST00000259808 TBC1D2Q9BYX2 928 aa18.58■□□□□ 0.56
RIPK1-201ENST00000259808 CEBPAP49715 358 aaPredicted RBP18.57■□□□□ 0.56
RIPK1-201ENST00000259808 SKOR2Q2VWA4 1001 aaPredicted RBP18.57■□□□□ 0.56
RIPK1-201ENST00000259808 EXOC6BQ9Y2D4 811 aa18.57■□□□□ 0.56
RIPK1-201ENST00000259808 SEC24BO95487 1268 aa18.57■□□□□ 0.56
RIPK1-201ENST00000259808 TRIM27P14373 513 aa18.57■□□□□ 0.56
RIPK1-201ENST00000259808 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
RIPK1-201ENST00000259808 KDM4AO75164 1064 aa18.56■□□□□ 0.56
RIPK1-201ENST00000259808 CREBRFQ8IUR6 639 aa18.56■□□□□ 0.56
RIPK1-201ENST00000259808 FAM43AQ8N2R8 423 aa18.56■□□□□ 0.56
RIPK1-201ENST00000259808 TESK2Q96S53 571 aa18.56■□□□□ 0.56
RIPK1-201ENST00000259808 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
RIPK1-201ENST00000259808 IFIT2P09913 472 aaKnown RBP18.55■□□□□ 0.56
RIPK1-201ENST00000259808 C1orf141Q5JVX7 400 aa18.55■□□□□ 0.56
RIPK1-201ENST00000259808 NME9Q86XW9 330 aa18.55■□□□□ 0.56
RIPK1-201ENST00000259808 DDX54Q8TDD1 881 aaKnown RBP18.55■□□□□ 0.56
RIPK1-201ENST00000259808 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
RIPK1-201ENST00000259808 RLBP1P12271 317 aa18.55■□□□□ 0.56
RIPK1-201ENST00000259808 PSME1Q06323 249 aa18.55■□□□□ 0.56
RIPK1-201ENST00000259808 F6X3S4 739 aa18.54■□□□□ 0.56
RIPK1-201ENST00000259808 ISY1Q9ULR0 285 aaKnown RBP18.54■□□□□ 0.56
RIPK1-201ENST00000259808 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
RIPK1-201ENST00000259808 UBTFL1P0CB47 393 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms