RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SAFB2Q14151 953 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCDC115-201ENST00000259229 WAPLQ7Z5K2 1190 aa24.62■■□□□ 1.53
CCDC115-201ENST00000259229 ADGRB2O60241 1585 aa24.61■■□□□ 1.53
CCDC115-201ENST00000259229 MIER1Q8N108 512 aa24.61■■□□□ 1.53
CCDC115-201ENST00000259229 NWD1Q149M9 1564 aa24.6■■□□□ 1.53
CCDC115-201ENST00000259229 HSPA2P54652 639 aa24.6■■□□□ 1.53
CCDC115-201ENST00000259229 CDCA8Q53HL2 280 aa24.6■■□□□ 1.53
CCDC115-201ENST00000259229 POGKQ9P215 609 aa24.6■■□□□ 1.53
CCDC115-201ENST00000259229 MINK1Q8N4C8 1332 aaPredicted RBP24.58■■□□□ 1.52
CCDC115-201ENST00000259229 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
CCDC115-201ENST00000259229 EVC2Q86UK5 1308 aa24.56■■□□□ 1.52
CCDC115-201ENST00000259229 PUS7Q96PZ0 661 aaKnown RBP24.54■■□□□ 1.52
CCDC115-201ENST00000259229 KCNA6P17658 529 aa24.52■■□□□ 1.52
CCDC115-201ENST00000259229 STRCP1A6NGW2 1772 aa24.5■■□□□ 1.51
CCDC115-201ENST00000259229 NALCNQ8IZF0 1738 aa24.5■■□□□ 1.51
CCDC115-201ENST00000259229 PER1O15534 1290 aaPredicted RBP24.49■■□□□ 1.51
CCDC115-201ENST00000259229 CABP2Q9NPB3 220 aa24.49■■□□□ 1.51
CCDC115-201ENST00000259229 PANK3Q9H999 370 aa24.48■■□□□ 1.51
CCDC115-201ENST00000259229 CDK19Q9BWU1 502 aa24.46■■□□□ 1.51
CCDC115-201ENST00000259229 TOPAZ1Q8N9V7 1692 aa24.46■■□□□ 1.51
CCDC115-201ENST00000259229 ATAD2Q6PL18 1390 aa24.46■■□□□ 1.51
CCDC115-201ENST00000259229 WASLO00401 505 aaPredicted RBP24.45■■□□□ 1.5
CCDC115-201ENST00000259229 ANP32CO43423 234 aa24.45■■□□□ 1.5
CCDC115-201ENST00000259229 USP32Q8NFA0 1604 aa24.45■■□□□ 1.5
CCDC115-201ENST00000259229 ATP7BP35670 1465 aa24.44■■□□□ 1.5
CCDC115-201ENST00000259229 NKTRP30414 1462 aaKnown RBP24.44■■□□□ 1.5
CCDC115-201ENST00000259229 SRPK2P78362 688 aaKnown RBP24.43■■□□□ 1.5
CCDC115-201ENST00000259229 CD163L1Q9NR16 1453 aa24.43■■□□□ 1.5
CCDC115-201ENST00000259229 NINLQ9Y2I6 1382 aa24.42■■□□□ 1.5
CCDC115-201ENST00000259229 SLC12A5Q9H2X9 1139 aa24.42■■□□□ 1.5
CCDC115-201ENST00000259229 CDC42BPGQ6DT37 1551 aa24.42■■□□□ 1.5
CCDC115-201ENST00000259229 FMN2Q9NZ56 1722 aa24.42■■□□□ 1.5
CCDC115-201ENST00000259229 PRKRIP1Q9H875 184 aaPredicted RBP24.41■■□□□ 1.5
CCDC115-201ENST00000259229 ANKRD36BQ8N2N9 1353 aa24.39■■□□□ 1.49
CCDC115-201ENST00000259229 PRR36Q9H6K5 1346 aa24.38■■□□□ 1.49
CCDC115-201ENST00000259229 CARD14Q9BXL6 1004 aa24.38■■□□□ 1.49
CCDC115-201ENST00000259229 ADGRL3Q9HAR2 1447 aa24.37■■□□□ 1.49
CCDC115-201ENST00000259229 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
CCDC115-201ENST00000259229 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
CCDC115-201ENST00000259229 RGPD8O14715 1765 aaPredicted RBP24.35■■□□□ 1.49
CCDC115-201ENST00000259229 AKAP12Q02952 1782 aa24.35■■□□□ 1.49
CCDC115-201ENST00000259229 ITSN1Q15811 1721 aa24.35■■□□□ 1.49
CCDC115-201ENST00000259229 NSD3Q9BZ95 1437 aa24.34■■□□□ 1.49
CCDC115-201ENST00000259229 AMER1Q5JTC6 1135 aaPredicted RBP24.34■■□□□ 1.49
CCDC115-201ENST00000259229 PARD3Q8TEW0 1356 aa24.34■■□□□ 1.49
CCDC115-201ENST00000259229 PPIP5K1Q6PFW1 1433 aa24.33■■□□□ 1.49
CCDC115-201ENST00000259229 NPC1L1Q9UHC9 1359 aa24.33■■□□□ 1.49
CCDC115-201ENST00000259229 MON2Q7Z3U7 1717 aa24.33■■□□□ 1.49
CCDC115-201ENST00000259229 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.48
CCDC115-201ENST00000259229 NUDT16Q96DE0 195 aaKnown RBP24.32■■□□□ 1.48
CCDC115-201ENST00000259229 CCER2I3L3R5 266 aa24.31■■□□□ 1.48
CCDC115-201ENST00000259229 RBM33Q96EV2 1170 aaKnown RBP24.31■■□□□ 1.48
CCDC115-201ENST00000259229 CABP1Q9NZU7 370 aa24.31■■□□□ 1.48
CCDC115-201ENST00000259229 CPSF1Q10570 1443 aaKnown RBP24.3■■□□□ 1.48
CCDC115-201ENST00000259229 KTN1Q86UP2 1357 aaKnown RBP24.3■■□□□ 1.48
CCDC115-201ENST00000259229 KNSTRNQ9Y448 316 aa24.3■■□□□ 1.48
CCDC115-201ENST00000259229 ANKARQ7Z5J8 1434 aa24.3■■□□□ 1.48
CCDC115-201ENST00000259229 NRKQ7Z2Y5 1582 aa24.28■■□□□ 1.48
CCDC115-201ENST00000259229 CCDC61Q9Y6R9 512 aa24.28■■□□□ 1.48
CCDC115-201ENST00000259229 CNGB1Q14028 1251 aaPredicted RBP24.26■■□□□ 1.47
CCDC115-201ENST00000259229 ANKRD26Q9UPS8 1709 aa24.26■■□□□ 1.47
CCDC115-201ENST00000259229 KIF20BQ96Q89 1820 aa24.26■■□□□ 1.47
CCDC115-201ENST00000259229 CC2D1BQ5T0F9 858 aaKnown RBP24.25■■□□□ 1.47
CCDC115-201ENST00000259229 NCOA3Q9Y6Q9 1424 aa24.25■■□□□ 1.47
CCDC115-201ENST00000259229 RALBP1Q15311 655 aa24.24■■□□□ 1.47
CCDC115-201ENST00000259229 PROSER2Q86WR7 435 aaPredicted RBP24.24■■□□□ 1.47
CCDC115-201ENST00000259229 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
CCDC115-201ENST00000259229 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
CCDC115-201ENST00000259229 NUTM2FA1L443 756 aa24.23■■□□□ 1.47
CCDC115-201ENST00000259229 CCDC184Q52MB2 194 aa24.23■■□□□ 1.47
CCDC115-201ENST00000259229 ZNF335Q9H4Z2 1342 aaPredicted RBP24.23■■□□□ 1.47
CCDC115-201ENST00000259229 LRRC7Q96NW7 1537 aa24.22■■□□□ 1.47
CCDC115-201ENST00000259229 PLEKHG3A1L390 1219 aa24.21■■□□□ 1.47
CCDC115-201ENST00000259229 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
CCDC115-201ENST00000259229 HDGFL2Q7Z4V5 671 aaPredicted RBP24.2■■□□□ 1.46
CCDC115-201ENST00000259229 DCCP43146 1447 aa24.19■■□□□ 1.46
CCDC115-201ENST00000259229 EDC4Q6P2E9 1401 aaKnown RBP24.19■■□□□ 1.46
CCDC115-201ENST00000259229 POLR3AO14802 1390 aaPredicted RBP24.18■■□□□ 1.46
CCDC115-201ENST00000259229 NSD2O96028 1365 aa24.18■■□□□ 1.46
CCDC115-201ENST00000259229 CGNL1Q0VF96 1302 aa24.18■■□□□ 1.46
CCDC115-201ENST00000259229 DMRT2Q9Y5R5 561 aa24.17■■□□□ 1.46
CCDC115-201ENST00000259229 ACEP12821 1306 aa24.16■■□□□ 1.46
CCDC115-201ENST00000259229 USP6P35125 1406 aa24.16■■□□□ 1.46
CCDC115-201ENST00000259229 SSH2Q76I76 1423 aa24.15■■□□□ 1.46
CCDC115-201ENST00000259229 C14orf37Q86TY3 774 aa24.14■■□□□ 1.46
CCDC115-201ENST00000259229 C19orf44Q9H6X5 657 aa24.14■■□□□ 1.46
CCDC115-201ENST00000259229 MST1RQ04912 1400 aa24.13■■□□□ 1.45
CCDC115-201ENST00000259229 BRD4O60885 1362 aaPredicted RBP24.13■■□□□ 1.45
CCDC115-201ENST00000259229 FYB1O15117 783 aa24.11■■□□□ 1.45
CCDC115-201ENST00000259229 C1orf167Q5SNV9 1468 aa24.11■■□□□ 1.45
CCDC115-201ENST00000259229 KIF1AQ12756 1690 aa24.1■■□□□ 1.45
CCDC115-201ENST00000259229 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
CCDC115-201ENST00000259229 PMFBP1Q8TBY8 1022 aa24.1■■□□□ 1.45
CCDC115-201ENST00000259229 ZNF692Q9BU19 519 aaPredicted RBP24.1■■□□□ 1.45
CCDC115-201ENST00000259229 PPP2R1AP30153 589 aa24.1■■□□□ 1.45
CCDC115-201ENST00000259229 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
CCDC115-201ENST00000259229 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
CCDC115-201ENST00000259229 PIK3C2AO00443 1686 aa24.07■■□□□ 1.44
CCDC115-201ENST00000259229 MSH6P52701 1360 aa24.07■■□□□ 1.44
CCDC115-201ENST00000259229 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms