RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA3-201ENST00000253812 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
PCDHGA3-201ENST00000253812 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA3-201ENST00000253812 PANK3Q9H999 370 aa15.88■□□□□ 0.13
PCDHGA3-201ENST00000253812 FAM69CQ0P6D2 419 aa15.88■□□□□ 0.13
PCDHGA3-201ENST00000253812 AFAP1Q8N556 730 aa15.88■□□□□ 0.13
PCDHGA3-201ENST00000253812 EIF3JO75822 258 aaKnown RBP15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 SMC3Q9UQE7 1217 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 USP47Q96K76 1375 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 FYCO1Q9BQS8 1478 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 CPLX2Q6PUV4 134 aaKnown RBP15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 GOLGA6L7A0A1B0GV03 622 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 ERICH4A6NGS2 130 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 CT47B1P0C2W7 299 aaPredicted RBP15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 GIMAP7Q8NHV1 300 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 CGNQ9P2M7 1197 aaKnown RBP15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
PCDHGA3-201ENST00000253812 VPS37CA5D8V6 355 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 GORABQ5T7V8 394 aa15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 UACAQ9BZF9 1416 aa15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 ANKRD50Q9ULJ7 1429 aa15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 NPHP1O15259 732 aa15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 RUFY2Q8WXA3 655 aa15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 BBXQ8WY36 941 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA3-201ENST00000253812 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
PCDHGA3-201ENST00000253812 SLC4A10Q6U841 1118 aa15.85■□□□□ 0.13
PCDHGA3-201ENST00000253812 PCMTD1Q96MG8 357 aaPredicted RBP15.85■□□□□ 0.13
PCDHGA3-201ENST00000253812 PRDM10Q9NQV6 1147 aa15.85■□□□□ 0.13
PCDHGA3-201ENST00000253812 STK11IPQ8N1F8 1099 aa15.85■□□□□ 0.13
PCDHGA3-201ENST00000253812 BACH2Q9BYV9 841 aa15.85■□□□□ 0.13
PCDHGA3-201ENST00000253812 DYDC1Q8WWB3 177 aa15.84■□□□□ 0.13
PCDHGA3-201ENST00000253812 ERLIN1O75477 346 aa15.84■□□□□ 0.13
PCDHGA3-201ENST00000253812 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
PCDHGA3-201ENST00000253812 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
PCDHGA3-201ENST00000253812 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
PCDHGA3-201ENST00000253812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.13
PCDHGA3-201ENST00000253812 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
PCDHGA3-201ENST00000253812 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
PCDHGA3-201ENST00000253812 CBX1P83916 185 aa15.82■□□□□ 0.12
PCDHGA3-201ENST00000253812 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
PCDHGA3-201ENST00000253812 PRM3Q9NNZ6 103 aa15.82■□□□□ 0.12
PCDHGA3-201ENST00000253812 ZHX1Q9UKY1 873 aaPredicted RBP15.82■□□□□ 0.12
PCDHGA3-201ENST00000253812 CAGE1Q8TC20 777 aa15.82■□□□□ 0.12
PCDHGA3-201ENST00000253812 CCDC47Q96A33 483 aaKnown RBP15.82■□□□□ 0.12
PCDHGA3-201ENST00000253812 RRBP1Q9P2E9 1410 aaKnown RBP15.81■□□□□ 0.12
PCDHGA3-201ENST00000253812 PRPF40AO75400 957 aaKnown RBP15.81■□□□□ 0.12
PCDHGA3-201ENST00000253812 MCM4P33991 863 aa15.81■□□□□ 0.12
PCDHGA3-201ENST00000253812 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
PCDHGA3-201ENST00000253812 SYNJ2O15056 1496 aa15.81■□□□□ 0.12
PCDHGA3-201ENST00000253812 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
PCDHGA3-201ENST00000253812 ANO2Q9NQ90 1003 aa15.8■□□□□ 0.12
PCDHGA3-201ENST00000253812 SKIDA1Q1XH10 827 aa15.8■□□□□ 0.12
PCDHGA3-201ENST00000253812 ZRSR2Q15696 482 aaKnown RBP15.79■□□□□ 0.12
PCDHGA3-201ENST00000253812 SDF4Q9BRK5 362 aa15.79■□□□□ 0.12
PCDHGA3-201ENST00000253812 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
PCDHGA3-201ENST00000253812 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
PCDHGA3-201ENST00000253812 MINK1Q8N4C8 1332 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA3-201ENST00000253812 TRIM29Q14134 588 aa15.78■□□□□ 0.12
PCDHGA3-201ENST00000253812 AKAP17AQ02040 695 aaKnown RBP15.78■□□□□ 0.12
PCDHGA3-201ENST00000253812 PDILTQ8N807 584 aa15.78■□□□□ 0.12
PCDHGA3-201ENST00000253812 MYO6Q9UM54 1294 aa15.78■□□□□ 0.12
PCDHGA3-201ENST00000253812 NAP1L1P55209 391 aaKnown RBP15.77■□□□□ 0.12
PCDHGA3-201ENST00000253812 MSH5O43196 834 aa15.77■□□□□ 0.12
PCDHGA3-201ENST00000253812 MARCH6O60337 910 aa15.77■□□□□ 0.11
PCDHGA3-201ENST00000253812 MCM2P49736 904 aa15.77■□□□□ 0.11
PCDHGA3-201ENST00000253812 SPC24Q8NBT2 197 aa15.77■□□□□ 0.11
PCDHGA3-201ENST00000253812 TOMM22Q9NS69 142 aa15.77■□□□□ 0.11
PCDHGA3-201ENST00000253812 CIZ1Q9ULV3 898 aaPredicted RBP15.77■□□□□ 0.11
PCDHGA3-201ENST00000253812 OLFM4Q6UX06 510 aa15.76■□□□□ 0.11
PCDHGA3-201ENST00000253812 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
PCDHGA3-201ENST00000253812 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
PCDHGA3-201ENST00000253812 NEXNQ0ZGT2 675 aa15.76■□□□□ 0.11
PCDHGA3-201ENST00000253812 CPLX1O14810 134 aa15.76■□□□□ 0.11
PCDHGA3-201ENST00000253812 ARHGAP5Q13017 1502 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 CDC45O75419 566 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 GOLGA6L10A6NI86 522 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 FBXW7Q969H0 707 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 CCDC9Q9Y3X0 531 aaKnown RBP15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 UBXN4Q92575 508 aa15.75■□□□□ 0.11
PCDHGA3-201ENST00000253812 TMCO3Q6UWJ1 677 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 GPATCH11Q8N954 259 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 FAM107BQ9H098 131 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 CWC22Q9HCG8 908 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 EVC2Q86UK5 1308 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 SYNE3Q6ZMZ3 975 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 RRP7AQ9Y3A4 280 aaKnown RBP15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 TIGD1Q96MW7 591 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 LNPKQ9C0E8 428 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 SMC2O95347 1197 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 RABEP1Q15276 862 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 CENPHQ9H3R5 247 aa15.74■□□□□ 0.11
PCDHGA3-201ENST00000253812 TROQ12816 1431 aaPredicted RBP15.73■□□□□ 0.11
PCDHGA3-201ENST00000253812 KINO60870 393 aaKnown RBP15.73■□□□□ 0.11
PCDHGA3-201ENST00000253812 DNAJC2Q99543 621 aaKnown RBP15.73■□□□□ 0.11
PCDHGA3-201ENST00000253812 KIF2AO00139 706 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms