RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 ANKRD45Q5TZF3 282 aa15.13■□□□□ 0.01
ZKSCAN3-201ENST00000252211 MFAP1P55081 439 aaKnown RBP15.13■□□□□ 0.01
ZKSCAN3-201ENST00000252211 RRP1P56182 461 aaKnown RBP15.12■□□□□ 0.01
ZKSCAN3-201ENST00000252211 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
ZKSCAN3-201ENST00000252211 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
ZKSCAN3-201ENST00000252211 AMOTL2Q9Y2J4 779 aa15.12■□□□□ 0.01
ZKSCAN3-201ENST00000252211 PLCH2O75038 1416 aa15.12■□□□□ 0.01
ZKSCAN3-201ENST00000252211 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
ZKSCAN3-201ENST00000252211 AIMP1Q12904 312 aaKnown RBP15.11■□□□□ 0.01
ZKSCAN3-201ENST00000252211 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
ZKSCAN3-201ENST00000252211 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
ZKSCAN3-201ENST00000252211 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 SPRYD3Q8NCJ5 442 aa15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 KCNH5Q8NCM2 988 aa15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 G3BP1Q13283 466 aaKnown RBP eCLIP15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 ZNF530Q6P9A1 599 aaPredicted RBP15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 SPG7Q9UQ90 795 aa15.1■□□□□ 0.01
ZKSCAN3-201ENST00000252211 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 VPS37DQ86XT2 251 aa15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 CENPQQ7L2Z9 268 aaPredicted RBP15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 HSP90B1P14625 803 aaKnown RBP15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 ZC3H6P61129 1189 aaKnown RBP15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 WDR7Q9Y4E6 1490 aa15.09■□□□□ 0.01
ZKSCAN3-201ENST00000252211 KLHL34Q8N239 644 aa15.08■□□□□ 0
ZKSCAN3-201ENST00000252211 IFIT2P09913 472 aaKnown RBP15.08■□□□□ 0
ZKSCAN3-201ENST00000252211 CCDC30Q5VVM6 783 aa15.08■□□□□ 0
ZKSCAN3-201ENST00000252211 TNRQ92752 1358 aa15.08■□□□□ 0
ZKSCAN3-201ENST00000252211 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
ZKSCAN3-201ENST00000252211 HSP90AB4PQ58FF6 505 aa15.07■□□□□ 0
ZKSCAN3-201ENST00000252211 CRBNQ96SW2 442 aa15.07■□□□□ 0
ZKSCAN3-201ENST00000252211 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
ZKSCAN3-201ENST00000252211 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
ZKSCAN3-201ENST00000252211 ADGRF5Q8IZF2 1346 aa15.06■□□□□ 0
ZKSCAN3-201ENST00000252211 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
ZKSCAN3-201ENST00000252211 CABP4P57796 275 aa15.06■□□□□ 0
ZKSCAN3-201ENST00000252211 RBM33Q96EV2 1170 aaKnown RBP15.06■□□□□ 0
ZKSCAN3-201ENST00000252211 DIAPH3Q9NSV4 1193 aa15.06■□□□□ 0
ZKSCAN3-201ENST00000252211 EXOC6Q8TAG9 804 aa15.05■□□□□ 0
ZKSCAN3-201ENST00000252211 PNISRQ8TF01 805 aaKnown RBP15.05■□□□□ 0
ZKSCAN3-201ENST00000252211 NUP153P49790 1475 aaKnown RBP15.05■□□□□ 0
ZKSCAN3-201ENST00000252211 FOXO3O43524 673 aa15.05■□□□□ 0
ZKSCAN3-201ENST00000252211 RRS1Q15050 365 aaKnown RBP15.05■□□□□ -0
ZKSCAN3-201ENST00000252211 GOLGA6L6A8MZA4 724 aa15.05■□□□□ -0
ZKSCAN3-201ENST00000252211 NRDCO43847 1150 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 AMOTL1Q8IY63 956 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 KDM5BQ9UGL1 1544 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 KIF3AQ9Y496 699 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 ADAMTS12P58397 1594 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 UBTFL1P0CB47 393 aaPredicted RBP15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 ZNF518AQ6AHZ1 1483 aa15.04■□□□□ -0
ZKSCAN3-201ENST00000252211 WASLO00401 505 aaPredicted RBP15.03■□□□□ -0
ZKSCAN3-201ENST00000252211 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
ZKSCAN3-201ENST00000252211 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
ZKSCAN3-201ENST00000252211 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
ZKSCAN3-201ENST00000252211 WDR62O43379 1518 aa15.02■□□□□ -0
ZKSCAN3-201ENST00000252211 ST18O60284 1047 aa15.02□□□□□ -0.01
ZKSCAN3-201ENST00000252211 A2MP01023 1474 aa15.02□□□□□ -0.01
ZKSCAN3-201ENST00000252211 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 GBP4Q96PP9 640 aa15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 TWISTNBQ3B726 338 aaPredicted RBP15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 CLSTN1O94985 981 aa15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 GNAI3P08754 354 aa15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 CCDC34Q96HJ3 373 aa15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 NSD3Q9BZ95 1437 aa15.01□□□□□ -0.01
ZKSCAN3-201ENST00000252211 CHMP4CQ96CF2 233 aa15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 TRIM34Q9BYJ4 488 aa15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 NOS1P29475 1434 aa15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 AAMPQ13685 434 aa15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 NOL8Q76FK4 1167 aaKnown RBP15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 FBXW7Q969H0 707 aa15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 EXOSC9Q06265 439 aaKnown RBP15□□□□□ -0.01
ZKSCAN3-201ENST00000252211 FAM135AQ9P2D6 1515 aa14.99□□□□□ -0.01
ZKSCAN3-201ENST00000252211 NUP160Q12769 1436 aa14.99□□□□□ -0.01
ZKSCAN3-201ENST00000252211 FAM177BA6PVY3 158 aa14.99□□□□□ -0.01
ZKSCAN3-201ENST00000252211 FCHSD2O94868 740 aa14.99□□□□□ -0.01
ZKSCAN3-201ENST00000252211 SLKQ9H2G2 1235 aaPredicted RBP14.99□□□□□ -0.01
ZKSCAN3-201ENST00000252211 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
ZKSCAN3-201ENST00000252211 LRPPRCP42704 1394 aaKnown RBP14.98□□□□□ -0.01
ZKSCAN3-201ENST00000252211 UHRF1BP1LA0JNW5 1464 aa14.98□□□□□ -0.01
ZKSCAN3-201ENST00000252211 APPP05067 770 aa14.98□□□□□ -0.01
ZKSCAN3-201ENST00000252211 NEUROD6Q96NK8 337 aa14.98□□□□□ -0.01
ZKSCAN3-201ENST00000252211 KIF21AQ7Z4S6 1674 aa14.98□□□□□ -0.01
ZKSCAN3-201ENST00000252211 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 ERC2O15083 957 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 REC8O95072 547 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 ABCC10Q5T3U5 1492 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 ADAMTS2O95450 1211 aa14.97□□□□□ -0.01
ZKSCAN3-201ENST00000252211 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
ZKSCAN3-201ENST00000252211 CPLX2Q6PUV4 134 aaKnown RBP14.96□□□□□ -0.01
ZKSCAN3-201ENST00000252211 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms