RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
LRRC4-201ENST00000249363 EID1Q9Y6B2 187 aa12.85□□□□□ -0.35
LRRC4-201ENST00000249363 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
LRRC4-201ENST00000249363 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
LRRC4-201ENST00000249363 CENPJQ9HC77 1338 aaPredicted RBP12.83□□□□□ -0.36
LRRC4-201ENST00000249363 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
LRRC4-201ENST00000249363 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
LRRC4-201ENST00000249363 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
LRRC4-201ENST00000249363 XIRP1Q702N8 1843 aaKnown RBP12.82□□□□□ -0.36
LRRC4-201ENST00000249363 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
LRRC4-201ENST00000249363 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
LRRC4-201ENST00000249363 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
LRRC4-201ENST00000249363 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
LRRC4-201ENST00000249363 NCKAP5LQ9HCH0 1330 aa12.79□□□□□ -0.36
LRRC4-201ENST00000249363 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
LRRC4-201ENST00000249363 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
LRRC4-201ENST00000249363 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
LRRC4-201ENST00000249363 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
LRRC4-201ENST00000249363 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
LRRC4-201ENST00000249363 TMF1P82094 1093 aa12.77□□□□□ -0.37
LRRC4-201ENST00000249363 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
LRRC4-201ENST00000249363 NKTRP30414 1462 aaKnown RBP12.77□□□□□ -0.37
LRRC4-201ENST00000249363 CDC42BPGQ6DT37 1551 aa12.76□□□□□ -0.37
LRRC4-201ENST00000249363 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
LRRC4-201ENST00000249363 CD163L1Q9NR16 1453 aa12.76□□□□□ -0.37
LRRC4-201ENST00000249363 DDX10Q13206 875 aaKnown RBP12.75□□□□□ -0.37
LRRC4-201ENST00000249363 STK26Q9P289 416 aa12.75□□□□□ -0.37
LRRC4-201ENST00000249363 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
LRRC4-201ENST00000249363 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
LRRC4-201ENST00000249363 WAPLQ7Z5K2 1190 aa12.74□□□□□ -0.37
LRRC4-201ENST00000249363 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
LRRC4-201ENST00000249363 ATP7BP35670 1465 aa12.74□□□□□ -0.37
LRRC4-201ENST00000249363 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
LRRC4-201ENST00000249363 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
LRRC4-201ENST00000249363 HSPA2P54652 639 aa12.73□□□□□ -0.37
LRRC4-201ENST00000249363 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
LRRC4-201ENST00000249363 KCNA6P17658 529 aa12.72□□□□□ -0.37
LRRC4-201ENST00000249363 EVC2Q86UK5 1308 aa12.71□□□□□ -0.38
LRRC4-201ENST00000249363 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
LRRC4-201ENST00000249363 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
LRRC4-201ENST00000249363 ADGRL3Q9HAR2 1447 aa12.69□□□□□ -0.38
LRRC4-201ENST00000249363 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
LRRC4-201ENST00000249363 KIF20BQ96Q89 1820 aa12.68□□□□□ -0.38
LRRC4-201ENST00000249363 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
LRRC4-201ENST00000249363 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
LRRC4-201ENST00000249363 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
LRRC4-201ENST00000249363 BCANQ96GW7 911 aa12.68□□□□□ -0.38
LRRC4-201ENST00000249363 POGKQ9P215 609 aa12.68□□□□□ -0.38
LRRC4-201ENST00000249363 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
LRRC4-201ENST00000249363 CPSF1Q10570 1443 aaKnown RBP12.68□□□□□ -0.38
LRRC4-201ENST00000249363 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
LRRC4-201ENST00000249363 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
LRRC4-201ENST00000249363 NPC1L1Q9UHC9 1359 aa12.67□□□□□ -0.38
LRRC4-201ENST00000249363 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
LRRC4-201ENST00000249363 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
LRRC4-201ENST00000249363 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
LRRC4-201ENST00000249363 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
LRRC4-201ENST00000249363 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
LRRC4-201ENST00000249363 MIER1Q8N108 512 aa12.66□□□□□ -0.38
LRRC4-201ENST00000249363 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
LRRC4-201ENST00000249363 CARD14Q9BXL6 1004 aa12.65□□□□□ -0.38
LRRC4-201ENST00000249363 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
LRRC4-201ENST00000249363 PANK3Q9H999 370 aa12.64□□□□□ -0.39
LRRC4-201ENST00000249363 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
LRRC4-201ENST00000249363 DCCP43146 1447 aa12.64□□□□□ -0.39
LRRC4-201ENST00000249363 PARD3Q8TEW0 1356 aa12.64□□□□□ -0.39
LRRC4-201ENST00000249363 A0A1W2PP64 1363 aa12.63□□□□□ -0.39
LRRC4-201ENST00000249363 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
LRRC4-201ENST00000249363 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
LRRC4-201ENST00000249363 SLC12A5Q9H2X9 1139 aa12.62□□□□□ -0.39
LRRC4-201ENST00000249363 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
LRRC4-201ENST00000249363 KTN1Q86UP2 1357 aaKnown RBP12.62□□□□□ -0.39
LRRC4-201ENST00000249363 KIF1AQ12756 1690 aa12.62□□□□□ -0.39
LRRC4-201ENST00000249363 POLR3AO14802 1390 aaPredicted RBP12.61□□□□□ -0.39
LRRC4-201ENST00000249363 PRKRIP1Q9H875 184 aaPredicted RBP12.61□□□□□ -0.39
LRRC4-201ENST00000249363 TRPM3Q9HCF6 1732 aaPredicted RBP12.61□□□□□ -0.39
LRRC4-201ENST00000249363 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
LRRC4-201ENST00000249363 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
LRRC4-201ENST00000249363 NSD3Q9BZ95 1437 aa12.59□□□□□ -0.39
LRRC4-201ENST00000249363 PIK3C2AO00443 1686 aa12.59□□□□□ -0.39
LRRC4-201ENST00000249363 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
LRRC4-201ENST00000249363 TMEM94Q12767 1356 aa12.59□□□□□ -0.39
LRRC4-201ENST00000249363 MST1RQ04912 1400 aa12.59□□□□□ -0.39
LRRC4-201ENST00000249363 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
LRRC4-201ENST00000249363 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.4
LRRC4-201ENST00000249363 POLR3GLQ9BT43 218 aa12.58□□□□□ -0.4
LRRC4-201ENST00000249363 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
LRRC4-201ENST00000249363 CABP1Q9NZU7 370 aa12.57□□□□□ -0.4
LRRC4-201ENST00000249363 EDC4Q6P2E9 1401 aaKnown RBP12.57□□□□□ -0.4
LRRC4-201ENST00000249363 CCER2I3L3R5 266 aa12.57□□□□□ -0.4
LRRC4-201ENST00000249363 USP6P35125 1406 aa12.56□□□□□ -0.4
LRRC4-201ENST00000249363 NSD2O96028 1365 aa12.56□□□□□ -0.4
LRRC4-201ENST00000249363 ALS2Q96Q42 1657 aa12.56□□□□□ -0.4
LRRC4-201ENST00000249363 C1orf167Q5SNV9 1468 aa12.56□□□□□ -0.4
LRRC4-201ENST00000249363 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
LRRC4-201ENST00000249363 ANP32CO43423 234 aa12.55□□□□□ -0.4
LRRC4-201ENST00000249363 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
LRRC4-201ENST00000249363 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
LRRC4-201ENST00000249363 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
LRRC4-201ENST00000249363 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms