RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 CGNL1Q0VF96 1302 aa16.87■□□□□ 0.29
PEX1-201ENST00000248633 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
PEX1-201ENST00000248633 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
PEX1-201ENST00000248633 APBB1O00213 710 aa16.85■□□□□ 0.29
PEX1-201ENST00000248633 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
PEX1-201ENST00000248633 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
PEX1-201ENST00000248633 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
PEX1-201ENST00000248633 C14orf93Q9H972 538 aaKnown RBP16.84■□□□□ 0.29
PEX1-201ENST00000248633 PTMAP06454 111 aaKnown RBP16.84■□□□□ 0.29
PEX1-201ENST00000248633 SCAF11Q99590 1463 aaKnown RBP16.84■□□□□ 0.29
PEX1-201ENST00000248633 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.29
PEX1-201ENST00000248633 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.29
PEX1-201ENST00000248633 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
PEX1-201ENST00000248633 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
PEX1-201ENST00000248633 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
PEX1-201ENST00000248633 DNTTIP2Q5QJE6 756 aaKnown RBP16.82■□□□□ 0.28
PEX1-201ENST00000248633 ATP10AO60312 1499 aa16.81■□□□□ 0.28
PEX1-201ENST00000248633 KDM5DQ9BY66 1539 aa16.81■□□□□ 0.28
PEX1-201ENST00000248633 HSP90AA2PQ14568 343 aaPredicted RBP16.81■□□□□ 0.28
PEX1-201ENST00000248633 E9PSI1 815 aa16.8■□□□□ 0.28
PEX1-201ENST00000248633 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
PEX1-201ENST00000248633 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
PEX1-201ENST00000248633 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
PEX1-201ENST00000248633 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
PEX1-201ENST00000248633 TESK2Q96S53 571 aa16.79■□□□□ 0.28
PEX1-201ENST00000248633 PPP2R1AP30153 589 aa16.79■□□□□ 0.28
PEX1-201ENST00000248633 PLCB2Q00722 1185 aa16.79■□□□□ 0.28
PEX1-201ENST00000248633 NPATQ14207 1427 aa16.78■□□□□ 0.28
PEX1-201ENST00000248633 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
PEX1-201ENST00000248633 THEMISQ8N1K5 641 aaPredicted RBP16.78■□□□□ 0.28
PEX1-201ENST00000248633 TSPOAP1O95153 1857 aa16.78■□□□□ 0.28
PEX1-201ENST00000248633 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
PEX1-201ENST00000248633 CDK19Q9BWU1 502 aa16.77■□□□□ 0.27
PEX1-201ENST00000248633 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
PEX1-201ENST00000248633 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
PEX1-201ENST00000248633 HECW2Q9P2P5 1572 aa16.75■□□□□ 0.27
PEX1-201ENST00000248633 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
PEX1-201ENST00000248633 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
PEX1-201ENST00000248633 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
PEX1-201ENST00000248633 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
PEX1-201ENST00000248633 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
PEX1-201ENST00000248633 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
PEX1-201ENST00000248633 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
PEX1-201ENST00000248633 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
PEX1-201ENST00000248633 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
PEX1-201ENST00000248633 TNRQ92752 1358 aa16.72■□□□□ 0.27
PEX1-201ENST00000248633 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
PEX1-201ENST00000248633 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
PEX1-201ENST00000248633 ZMYM3Q14202 1370 aa16.72■□□□□ 0.27
PEX1-201ENST00000248633 UNC13BO14795 1591 aa16.72■□□□□ 0.27
PEX1-201ENST00000248633 COG3Q96JB2 828 aa16.71■□□□□ 0.27
PEX1-201ENST00000248633 MTHFSP49914 203 aa16.7■□□□□ 0.26
PEX1-201ENST00000248633 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
PEX1-201ENST00000248633 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
PEX1-201ENST00000248633 PTPRTO14522 1441 aa16.7■□□□□ 0.26
PEX1-201ENST00000248633 C22orf23Q9BZE7 217 aa16.7■□□□□ 0.26
PEX1-201ENST00000248633 TRPM2O94759 1503 aa16.69■□□□□ 0.26
PEX1-201ENST00000248633 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
PEX1-201ENST00000248633 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
PEX1-201ENST00000248633 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
PEX1-201ENST00000248633 TRAK2O60296 914 aa16.68■□□□□ 0.26
PEX1-201ENST00000248633 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
PEX1-201ENST00000248633 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
PEX1-201ENST00000248633 ZKSCAN2Q63HK3 967 aa16.67■□□□□ 0.26
PEX1-201ENST00000248633 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
PEX1-201ENST00000248633 DDX49Q9Y6V7 483 aaKnown RBP16.67■□□□□ 0.26
PEX1-201ENST00000248633 ANKRD45Q5TZF3 282 aa16.66■□□□□ 0.26
PEX1-201ENST00000248633 ATAD2Q6PL18 1390 aa16.66■□□□□ 0.26
PEX1-201ENST00000248633 DDX11L8A8MPP1 907 aa16.66■□□□□ 0.26
PEX1-201ENST00000248633 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
PEX1-201ENST00000248633 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
PEX1-201ENST00000248633 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
PEX1-201ENST00000248633 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
PEX1-201ENST00000248633 MAGI2Q86UL8 1455 aa16.65■□□□□ 0.26
PEX1-201ENST00000248633 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
PEX1-201ENST00000248633 TET3O43151 1660 aa16.64■□□□□ 0.26
PEX1-201ENST00000248633 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
PEX1-201ENST00000248633 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
PEX1-201ENST00000248633 IGHDP01880 384 aa16.64■□□□□ 0.25
PEX1-201ENST00000248633 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
PEX1-201ENST00000248633 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
PEX1-201ENST00000248633 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
PEX1-201ENST00000248633 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
PEX1-201ENST00000248633 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
PEX1-201ENST00000248633 C8orf34Q49A92 452 aa16.63■□□□□ 0.25
PEX1-201ENST00000248633 INO80Q9ULG1 1556 aaPredicted RBP16.63■□□□□ 0.25
PEX1-201ENST00000248633 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
PEX1-201ENST00000248633 AMPHP49418 695 aa16.62■□□□□ 0.25
PEX1-201ENST00000248633 CALD1Q05682 793 aaKnown RBP16.62■□□□□ 0.25
PEX1-201ENST00000248633 ABCC3O15438 1527 aa16.62■□□□□ 0.25
PEX1-201ENST00000248633 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
PEX1-201ENST00000248633 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
PEX1-201ENST00000248633 NUDT16Q96DE0 195 aaKnown RBP16.61■□□□□ 0.25
PEX1-201ENST00000248633 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
PEX1-201ENST00000248633 PER1O15534 1290 aaPredicted RBP16.61■□□□□ 0.25
PEX1-201ENST00000248633 KDM5CP41229 1560 aa16.6■□□□□ 0.25
PEX1-201ENST00000248633 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
PEX1-201ENST00000248633 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
PEX1-201ENST00000248633 CCDC61Q9Y6R9 512 aa16.59■□□□□ 0.25
PEX1-201ENST00000248633 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms