RNA–Protein interactions for RNA: ENST00000226951.10

CLNK-201, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLNK, Length 5,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-201ENST00000226951 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
CLNK-201ENST00000226951 CALCOCO1Q9P1Z2 691 aa11.81□□□□□ -0.52
CLNK-201ENST00000226951 VPS37CA5D8V6 355 aaPredicted RBP11.81□□□□□ -0.52
CLNK-201ENST00000226951 H0YHG0 523 aa11.8□□□□□ -0.52
CLNK-201ENST00000226951 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
CLNK-201ENST00000226951 CLCN1P35523 988 aa11.8□□□□□ -0.52
CLNK-201ENST00000226951 TRIM29Q14134 588 aa11.8□□□□□ -0.52
CLNK-201ENST00000226951 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLNK-201ENST00000226951 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
CLNK-201ENST00000226951 PNISRQ8TF01 805 aaKnown RBP11.8□□□□□ -0.52
CLNK-201ENST00000226951 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
CLNK-201ENST00000226951 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
CLNK-201ENST00000226951 HFM1A2PYH4 1435 aa11.79□□□□□ -0.52
CLNK-201ENST00000226951 GNAI1P63096 354 aa11.79□□□□□ -0.52
CLNK-201ENST00000226951 ERC2O15083 957 aa11.79□□□□□ -0.52
CLNK-201ENST00000226951 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
CLNK-201ENST00000226951 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
CLNK-201ENST00000226951 ERLIN1O75477 346 aa11.78□□□□□ -0.52
CLNK-201ENST00000226951 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
CLNK-201ENST00000226951 STK26Q9P289 416 aa11.78□□□□□ -0.52
CLNK-201ENST00000226951 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
CLNK-201ENST00000226951 KIF2AO00139 706 aaPredicted RBP11.78□□□□□ -0.52
CLNK-201ENST00000226951 RIPK4P57078 832 aa11.78□□□□□ -0.52
CLNK-201ENST00000226951 CCDC191Q8NCU4 936 aa11.78□□□□□ -0.52
CLNK-201ENST00000226951 CEP89Q96ST8 783 aa11.78□□□□□ -0.52
CLNK-201ENST00000226951 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
CLNK-201ENST00000226951 PES1O00541 588 aaKnown RBP11.77□□□□□ -0.52
CLNK-201ENST00000226951 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.53
CLNK-201ENST00000226951 PPP2R1AP30153 589 aa11.77□□□□□ -0.53
CLNK-201ENST00000226951 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
CLNK-201ENST00000226951 PLEKHH1Q9ULM0 1364 aa11.77□□□□□ -0.53
CLNK-201ENST00000226951 EFCAB2Q5VUJ9 269 aa11.77□□□□□ -0.53
CLNK-201ENST00000226951 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
CLNK-201ENST00000226951 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
CLNK-201ENST00000226951 CLSTN1O94985 981 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 HNRNPMP52272 730 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLNK-201ENST00000226951 PDCP20941 246 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
CLNK-201ENST00000226951 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 PRIMPOLQ96LW4 560 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 CNTROBQ8N137 903 aa11.76□□□□□ -0.53
CLNK-201ENST00000226951 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
CLNK-201ENST00000226951 CBFA2T2O43439 604 aa11.75□□□□□ -0.53
CLNK-201ENST00000226951 WDR63Q8IWG1 891 aa11.75□□□□□ -0.53
CLNK-201ENST00000226951 KIAA0754O94854 1291 aa11.75□□□□□ -0.53
CLNK-201ENST00000226951 SMC2O95347 1197 aa11.75□□□□□ -0.53
CLNK-201ENST00000226951 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
CLNK-201ENST00000226951 CAGE1Q8TC20 777 aa11.75□□□□□ -0.53
CLNK-201ENST00000226951 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 ATAD2BQ9ULI0 1458 aa11.74□□□□□ -0.53
CLNK-201ENST00000226951 A0A0G2JS52 829 aa11.74□□□□□ -0.53
CLNK-201ENST00000226951 PATL2C9JE40 543 aaKnown RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 CBX1P83916 185 aa11.74□□□□□ -0.53
CLNK-201ENST00000226951 AKAP17AQ02040 695 aaKnown RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 GTPBP4Q9BZE4 634 aaKnown RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 MYO6Q9UM54 1294 aa11.74□□□□□ -0.53
CLNK-201ENST00000226951 MVPQ14764 893 aaKnown RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
CLNK-201ENST00000226951 HIP1O00291 1037 aa11.74□□□□□ -0.53
CLNK-201ENST00000226951 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
CLNK-201ENST00000226951 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
CLNK-201ENST00000226951 PDILTQ8N807 584 aa11.73□□□□□ -0.53
CLNK-201ENST00000226951 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
CLNK-201ENST00000226951 DHX29Q7Z478 1369 aaKnown RBP11.73□□□□□ -0.53
CLNK-201ENST00000226951 KIAA1107Q9UPP5 1409 aa11.73□□□□□ -0.53
CLNK-201ENST00000226951 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLNK-201ENST00000226951 ERCC6Q03468 1493 aa11.73□□□□□ -0.53
CLNK-201ENST00000226951 HECW1Q76N89 1606 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 TAF7LQ5H9L4 462 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 NEK4P51957 841 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 UVSSAQ2YD98 709 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 NKTRP30414 1462 aaKnown RBP11.72□□□□□ -0.53
CLNK-201ENST00000226951 CPLX1O14810 134 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 CHD1LQ86WJ1 897 aa11.72□□□□□ -0.53
CLNK-201ENST00000226951 FAM107BQ9H098 131 aa11.71□□□□□ -0.53
CLNK-201ENST00000226951 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
CLNK-201ENST00000226951 ERICH4A6NGS2 130 aa11.71□□□□□ -0.53
CLNK-201ENST00000226951 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
CLNK-201ENST00000226951 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
CLNK-201ENST00000226951 ERBINQ96RT1 1412 aa11.71□□□□□ -0.54
CLNK-201ENST00000226951 SOX12O15370 315 aa11.71□□□□□ -0.54
CLNK-201ENST00000226951 CCDC27Q2M243 656 aa11.71□□□□□ -0.54
CLNK-201ENST00000226951 COG3Q96JB2 828 aa11.71□□□□□ -0.54
CLNK-201ENST00000226951 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.54
CLNK-201ENST00000226951 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 CCDC183Q5T5S1 534 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 PIP4K2AP48426 406 aaPredicted RBP11.7□□□□□ -0.54
CLNK-201ENST00000226951 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 ZRSR2Q15696 482 aaKnown RBP11.7□□□□□ -0.54
CLNK-201ENST00000226951 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 BCAR3O75815 825 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
CLNK-201ENST00000226951 TMCO3Q6UWJ1 677 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms