RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 EVC2Q86UK5 1308 aa23.03■■□□□ 1.28
CHMP5-201ENST00000223500 MINK1Q8N4C8 1332 aaPredicted RBP23.03■■□□□ 1.28
CHMP5-201ENST00000223500 KIF7Q2M1P5 1343 aa23.02■■□□□ 1.28
CHMP5-201ENST00000223500 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.28
CHMP5-201ENST00000223500 NKTRP30414 1462 aaKnown RBP23.01■■□□□ 1.27
CHMP5-201ENST00000223500 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
CHMP5-201ENST00000223500 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
CHMP5-201ENST00000223500 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
CHMP5-201ENST00000223500 PUS7Q96PZ0 661 aaKnown RBP22.98■■□□□ 1.27
CHMP5-201ENST00000223500 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.97■■□□□ 1.27
CHMP5-201ENST00000223500 STRCP1A6NGW2 1772 aa22.96■■□□□ 1.27
CHMP5-201ENST00000223500 TULP4Q9NRJ4 1543 aa22.95■■□□□ 1.26
CHMP5-201ENST00000223500 ADGRB2O60241 1585 aa22.95■■□□□ 1.26
CHMP5-201ENST00000223500 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
CHMP5-201ENST00000223500 SRPK2P78362 688 aaKnown RBP22.94■■□□□ 1.26
CHMP5-201ENST00000223500 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
CHMP5-201ENST00000223500 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
CHMP5-201ENST00000223500 C14orf37Q86TY3 774 aa22.92■■□□□ 1.26
CHMP5-201ENST00000223500 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
CHMP5-201ENST00000223500 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
CHMP5-201ENST00000223500 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
CHMP5-201ENST00000223500 ATAD2Q6PL18 1390 aa22.9■■□□□ 1.26
CHMP5-201ENST00000223500 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.26
CHMP5-201ENST00000223500 NALCNQ8IZF0 1738 aa22.89■■□□□ 1.25
CHMP5-201ENST00000223500 RBM33Q96EV2 1170 aaKnown RBP22.88■■□□□ 1.25
CHMP5-201ENST00000223500 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
CHMP5-201ENST00000223500 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
CHMP5-201ENST00000223500 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
CHMP5-201ENST00000223500 C19orf44Q9H6X5 657 aa22.85■■□□□ 1.25
CHMP5-201ENST00000223500 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
CHMP5-201ENST00000223500 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
CHMP5-201ENST00000223500 LRRC7Q96NW7 1537 aa22.84■■□□□ 1.25
CHMP5-201ENST00000223500 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
CHMP5-201ENST00000223500 MYOM1P52179 1685 aa22.82■■□□□ 1.24
CHMP5-201ENST00000223500 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
CHMP5-201ENST00000223500 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
CHMP5-201ENST00000223500 MSH6P52701 1360 aa22.8■■□□□ 1.24
CHMP5-201ENST00000223500 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
CHMP5-201ENST00000223500 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
CHMP5-201ENST00000223500 ATF3P18847 181 aa22.79■■□□□ 1.24
CHMP5-201ENST00000223500 DCCP43146 1447 aa22.79■■□□□ 1.24
CHMP5-201ENST00000223500 SLC12A5Q9H2X9 1139 aa22.79■■□□□ 1.24
CHMP5-201ENST00000223500 PANK3Q9H999 370 aa22.79■■□□□ 1.24
CHMP5-201ENST00000223500 ATP7BP35670 1465 aa22.78■■□□□ 1.24
CHMP5-201ENST00000223500 NUTM2FA1L443 756 aa22.78■■□□□ 1.24
CHMP5-201ENST00000223500 ITSN1Q15811 1721 aa22.78■■□□□ 1.24
CHMP5-201ENST00000223500 CADPS2Q86UW7 1296 aa22.77■■□□□ 1.24
CHMP5-201ENST00000223500 CABP1Q9NZU7 370 aa22.77■■□□□ 1.24
CHMP5-201ENST00000223500 PRR36Q9H6K5 1346 aa22.77■■□□□ 1.24
CHMP5-201ENST00000223500 PPIP5K1Q6PFW1 1433 aa22.76■■□□□ 1.23
CHMP5-201ENST00000223500 LTBP4Q8N2S1 1624 aa22.75■■□□□ 1.23
CHMP5-201ENST00000223500 TERF2IPQ9NYB0 399 aa22.75■■□□□ 1.23
CHMP5-201ENST00000223500 RGPD8O14715 1765 aaPredicted RBP22.75■■□□□ 1.23
CHMP5-201ENST00000223500 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
CHMP5-201ENST00000223500 USP32Q8NFA0 1604 aa22.74■■□□□ 1.23
CHMP5-201ENST00000223500 TOPAZ1Q8N9V7 1692 aa22.74■■□□□ 1.23
CHMP5-201ENST00000223500 ANKRD36BQ8N2N9 1353 aa22.73■■□□□ 1.23
CHMP5-201ENST00000223500 PLEKHG3A1L390 1219 aa22.72■■□□□ 1.23
CHMP5-201ENST00000223500 KNSTRNQ9Y448 316 aa22.7■■□□□ 1.22
CHMP5-201ENST00000223500 ZNF692Q9BU19 519 aaPredicted RBP22.68■■□□□ 1.22
CHMP5-201ENST00000223500 A0A1W2PP64 1363 aa22.68■■□□□ 1.22
CHMP5-201ENST00000223500 PER1O15534 1290 aaPredicted RBP22.67■■□□□ 1.22
CHMP5-201ENST00000223500 ESCO1Q5FWF5 840 aa22.67■■□□□ 1.22
CHMP5-201ENST00000223500 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
CHMP5-201ENST00000223500 C1orf167Q5SNV9 1468 aa22.67■■□□□ 1.22
CHMP5-201ENST00000223500 MST1RQ04912 1400 aa22.67■■□□□ 1.22
CHMP5-201ENST00000223500 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
CHMP5-201ENST00000223500 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
CHMP5-201ENST00000223500 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
CHMP5-201ENST00000223500 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
CHMP5-201ENST00000223500 CARD14Q9BXL6 1004 aa22.66■■□□□ 1.22
CHMP5-201ENST00000223500 CPSF1Q10570 1443 aaKnown RBP22.65■■□□□ 1.22
CHMP5-201ENST00000223500 KTN1Q86UP2 1357 aaKnown RBP22.65■■□□□ 1.22
CHMP5-201ENST00000223500 ACEP12821 1306 aa22.65■■□□□ 1.22
CHMP5-201ENST00000223500 ANP32CO43423 234 aa22.65■■□□□ 1.22
CHMP5-201ENST00000223500 NSD3Q9BZ95 1437 aa22.65■■□□□ 1.22
CHMP5-201ENST00000223500 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
CHMP5-201ENST00000223500 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
CHMP5-201ENST00000223500 MON2Q7Z3U7 1717 aa22.62■■□□□ 1.21
CHMP5-201ENST00000223500 ORAI2Q96SN7 254 aa22.61■■□□□ 1.21
CHMP5-201ENST00000223500 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
CHMP5-201ENST00000223500 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
CHMP5-201ENST00000223500 EDC4Q6P2E9 1401 aaKnown RBP22.6■■□□□ 1.21
CHMP5-201ENST00000223500 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
CHMP5-201ENST00000223500 AMER1Q5JTC6 1135 aaPredicted RBP22.59■■□□□ 1.21
CHMP5-201ENST00000223500 USP6P35125 1406 aa22.58■■□□□ 1.2
CHMP5-201ENST00000223500 PSME1Q06323 249 aa22.57■■□□□ 1.2
CHMP5-201ENST00000223500 IQSEC2Q5JU85 1478 aa22.57■■□□□ 1.2
CHMP5-201ENST00000223500 BRD4O60885 1362 aaPredicted RBP22.56■■□□□ 1.2
CHMP5-201ENST00000223500 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
CHMP5-201ENST00000223500 NSD2O96028 1365 aa22.56■■□□□ 1.2
CHMP5-201ENST00000223500 CC2D1BQ5T0F9 858 aaKnown RBP22.55■■□□□ 1.2
CHMP5-201ENST00000223500 FOXO3O43524 673 aa22.54■■□□□ 1.2
CHMP5-201ENST00000223500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.54■■□□□ 1.2
CHMP5-201ENST00000223500 PRKRIP1Q9H875 184 aaPredicted RBP22.54■■□□□ 1.2
CHMP5-201ENST00000223500 TOM1O60784 492 aa22.54■■□□□ 1.2
CHMP5-201ENST00000223500 RALBP1Q15311 655 aa22.54■■□□□ 1.2
CHMP5-201ENST00000223500 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
CHMP5-201ENST00000223500 TTC21AQ8NDW8 1320 aa22.53■■□□□ 1.2
CHMP5-201ENST00000223500 KIF20BQ96Q89 1820 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms