RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 SIRT1Q96EB6 747 aa32.07■■■□□ 2.72
USF2-201ENST00000222305 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.06■■■□□ 2.72
USF2-201ENST00000222305 TULP4Q9NRJ4 1543 aa32.06■■■□□ 2.72
USF2-201ENST00000222305 POLR3GLQ9BT43 218 aa32.05■■■□□ 2.72
USF2-201ENST00000222305 MINK1Q8N4C8 1332 aaPredicted RBP32.05■■■□□ 2.72
USF2-201ENST00000222305 DMRT2Q9Y5R5 561 aa32.03■■■□□ 2.72
USF2-201ENST00000222305 SLC24A1O60721 1099 aa31.99■■■□□ 2.71
USF2-201ENST00000222305 NALCNQ8IZF0 1738 aa31.97■■■□□ 2.71
USF2-201ENST00000222305 ADGRB2O60241 1585 aa31.97■■■□□ 2.71
USF2-201ENST00000222305 DDX10Q13206 875 aaKnown RBP31.97■■■□□ 2.71
USF2-201ENST00000222305 MYOM1P52179 1685 aa31.96■■■□□ 2.71
USF2-201ENST00000222305 EVC2Q86UK5 1308 aa31.96■■■□□ 2.71
USF2-201ENST00000222305 NKTRP30414 1462 aaKnown RBP31.96■■■□□ 2.71
USF2-201ENST00000222305 ZNF335Q9H4Z2 1342 aaPredicted RBP31.95■■■□□ 2.71
USF2-201ENST00000222305 CDCA8Q53HL2 280 aa31.93■■■□□ 2.7
USF2-201ENST00000222305 RBM33Q96EV2 1170 aaKnown RBP31.92■■■□□ 2.7
USF2-201ENST00000222305 CABP2Q9NPB3 220 aa31.89■■■□□ 2.7
USF2-201ENST00000222305 CDK19Q9BWU1 502 aa31.88■■■□□ 2.69
USF2-201ENST00000222305 SRPK2P78362 688 aaKnown RBP31.87■■■□□ 2.69
USF2-201ENST00000222305 XIRP1Q702N8 1843 aaKnown RBP31.87■■■□□ 2.69
USF2-201ENST00000222305 WASLO00401 505 aaPredicted RBP31.86■■■□□ 2.69
USF2-201ENST00000222305 PROSER2Q86WR7 435 aaPredicted RBP31.86■■■□□ 2.69
USF2-201ENST00000222305 DIEXFQ68CQ4 756 aaKnown RBP31.85■■■□□ 2.69
USF2-201ENST00000222305 ADGRL3Q9HAR2 1447 aa31.82■■■□□ 2.68
USF2-201ENST00000222305 FMN2Q9NZ56 1722 aa31.82■■■□□ 2.68
USF2-201ENST00000222305 RGPD8O14715 1765 aaPredicted RBP31.82■■■□□ 2.68
USF2-201ENST00000222305 CDC42BPGQ6DT37 1551 aa31.81■■■□□ 2.68
USF2-201ENST00000222305 PUS7Q96PZ0 661 aaKnown RBP31.8■■■□□ 2.68
USF2-201ENST00000222305 TMEM94Q12767 1356 aa31.79■■■□□ 2.68
USF2-201ENST00000222305 USP32Q8NFA0 1604 aa31.78■■■□□ 2.68
USF2-201ENST00000222305 C14orf37Q86TY3 774 aa31.78■■■□□ 2.68
USF2-201ENST00000222305 ATAD2Q6PL18 1390 aa31.77■■■□□ 2.68
USF2-201ENST00000222305 LRRC7Q96NW7 1537 aa31.76■■■□□ 2.68
USF2-201ENST00000222305 TOPAZ1Q8N9V7 1692 aa31.76■■■□□ 2.68
USF2-201ENST00000222305 ATP7BP35670 1465 aa31.76■■■□□ 2.68
USF2-201ENST00000222305 TMC1Q8TDI8 760 aa31.75■■■□□ 2.67
USF2-201ENST00000222305 ITSN1Q15811 1721 aa31.74■■■□□ 2.67
USF2-201ENST00000222305 NUTM2FA1L443 756 aa31.74■■■□□ 2.67
USF2-201ENST00000222305 PRR36Q9H6K5 1346 aa31.73■■■□□ 2.67
USF2-201ENST00000222305 LTBP4Q8N2S1 1624 aa31.72■■■□□ 2.67
USF2-201ENST00000222305 SLC12A5Q9H2X9 1139 aa31.72■■■□□ 2.67
USF2-201ENST00000222305 NUDT16Q96DE0 195 aaKnown RBP31.71■■■□□ 2.67
USF2-201ENST00000222305 PANK3Q9H999 370 aa31.71■■■□□ 2.67
USF2-201ENST00000222305 NCOA3Q9Y6Q9 1424 aa31.7■■■□□ 2.67
USF2-201ENST00000222305 PPIP5K1Q6PFW1 1433 aa31.68■■■□□ 2.66
USF2-201ENST00000222305 NINLQ9Y2I6 1382 aa31.67■■■□□ 2.66
USF2-201ENST00000222305 C19orf44Q9H6X5 657 aa31.65■■■□□ 2.66
USF2-201ENST00000222305 CABP1Q9NZU7 370 aa31.65■■■□□ 2.66
USF2-201ENST00000222305 ANKARQ7Z5J8 1434 aa31.64■■■□□ 2.66
USF2-201ENST00000222305 CCDC61Q9Y6R9 512 aa31.64■■■□□ 2.65
USF2-201ENST00000222305 AKAP12Q02952 1782 aa31.63■■■□□ 2.65
USF2-201ENST00000222305 CD163L1Q9NR16 1453 aa31.63■■■□□ 2.65
USF2-201ENST00000222305 MSH6P52701 1360 aa31.61■■■□□ 2.65
USF2-201ENST00000222305 ANKRD36BQ8N2N9 1353 aa31.61■■■□□ 2.65
USF2-201ENST00000222305 DCCP43146 1447 aa31.61■■■□□ 2.65
USF2-201ENST00000222305 A0A1W2PP64 1363 aa31.6■■■□□ 2.65
USF2-201ENST00000222305 PER1O15534 1290 aaPredicted RBP31.59■■■□□ 2.65
USF2-201ENST00000222305 MON2Q7Z3U7 1717 aa31.58■■■□□ 2.65
USF2-201ENST00000222305 ATF3P18847 181 aa31.57■■■□□ 2.64
USF2-201ENST00000222305 CARD14Q9BXL6 1004 aa31.57■■■□□ 2.64
USF2-201ENST00000222305 NSD3Q9BZ95 1437 aa31.54■■■□□ 2.64
USF2-201ENST00000222305 TERF2IPQ9NYB0 399 aa31.54■■■□□ 2.64
USF2-201ENST00000222305 MST1RQ04912 1400 aa31.53■■■□□ 2.64
USF2-201ENST00000222305 CNGB1Q14028 1251 aaPredicted RBP31.53■■■□□ 2.64
USF2-201ENST00000222305 HDGFL2Q7Z4V5 671 aaPredicted RBP31.53■■■□□ 2.64
USF2-201ENST00000222305 PMFBP1Q8TBY8 1022 aa31.53■■■□□ 2.64
USF2-201ENST00000222305 CPSF1Q10570 1443 aaKnown RBP31.52■■■□□ 2.64
USF2-201ENST00000222305 C1orf167Q5SNV9 1468 aa31.52■■■□□ 2.64
USF2-201ENST00000222305 PLEKHG3A1L390 1219 aa31.51■■■□□ 2.63
USF2-201ENST00000222305 CADPS2Q86UW7 1296 aa31.51■■■□□ 2.63
USF2-201ENST00000222305 KNSTRNQ9Y448 316 aa31.51■■■□□ 2.63
USF2-201ENST00000222305 ACEP12821 1306 aa31.5■■■□□ 2.63
USF2-201ENST00000222305 KTN1Q86UP2 1357 aaKnown RBP31.48■■■□□ 2.63
USF2-201ENST00000222305 KIF20BQ96Q89 1820 aa31.48■■■□□ 2.63
USF2-201ENST00000222305 ANP32CO43423 234 aa31.48■■■□□ 2.63
USF2-201ENST00000222305 ESCO1Q5FWF5 840 aa31.48■■■□□ 2.63
USF2-201ENST00000222305 NRKQ7Z2Y5 1582 aa31.48■■■□□ 2.63
USF2-201ENST00000222305 MIER1Q8N108 512 aa31.48■■■□□ 2.63
USF2-201ENST00000222305 KIF1AQ12756 1690 aa31.47■■■□□ 2.63
USF2-201ENST00000222305 ORAI2Q96SN7 254 aa31.46■■■□□ 2.63
USF2-201ENST00000222305 PHF8Q9UPP1 1060 aa31.46■■■□□ 2.63
USF2-201ENST00000222305 POLR3AO14802 1390 aaPredicted RBP31.45■■■□□ 2.63
USF2-201ENST00000222305 AMER1Q5JTC6 1135 aaPredicted RBP31.44■■■□□ 2.62
USF2-201ENST00000222305 NGDNQ8NEJ9 315 aaKnown RBP31.44■■■□□ 2.62
USF2-201ENST00000222305 CC2D1BQ5T0F9 858 aaKnown RBP31.43■■■□□ 2.62
USF2-201ENST00000222305 EDC4Q6P2E9 1401 aaKnown RBP31.42■■■□□ 2.62
USF2-201ENST00000222305 ANKRD26Q9UPS8 1709 aa31.41■■■□□ 2.62
USF2-201ENST00000222305 USP6P35125 1406 aa31.41■■■□□ 2.62
USF2-201ENST00000222305 ZNF692Q9BU19 519 aaPredicted RBP31.41■■■□□ 2.62
USF2-201ENST00000222305 PRKRIP1Q9H875 184 aaPredicted RBP31.41■■■□□ 2.62
USF2-201ENST00000222305 CGNL1Q0VF96 1302 aa31.38■■■□□ 2.61
USF2-201ENST00000222305 NPC1L1Q9UHC9 1359 aa31.37■■■□□ 2.61
USF2-201ENST00000222305 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.37■■■□□ 2.61
USF2-201ENST00000222305 CERKQ8TCT0 537 aa31.37■■■□□ 2.61
USF2-201ENST00000222305 SLAIN2Q9P270 581 aa31.35■■■□□ 2.61
USF2-201ENST00000222305 PARD3Q8TEW0 1356 aa31.34■■■□□ 2.61
USF2-201ENST00000222305 SSH2Q76I76 1423 aa31.33■■■□□ 2.61
USF2-201ENST00000222305 FOXO3O43524 673 aa31.32■■■□□ 2.6
USF2-201ENST00000222305 TTC21BQ7Z4L5 1316 aa31.31■■■□□ 2.6
USF2-201ENST00000222305 NSD2O96028 1365 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms