RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 E9PSI1 815 aa16.43■□□□□ 0.22
PCDHB4-201ENST00000194152 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
PCDHB4-201ENST00000194152 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 ARID3AQ99856 593 aa16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 XPCQ01831 940 aaPredicted RBP16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 NME9Q86XW9 330 aa16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
PCDHB4-201ENST00000194152 EXOSC9Q06265 439 aaKnown RBP16.41■□□□□ 0.22
PCDHB4-201ENST00000194152 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
PCDHB4-201ENST00000194152 COG3Q96JB2 828 aa16.41■□□□□ 0.22
PCDHB4-201ENST00000194152 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
PCDHB4-201ENST00000194152 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
PCDHB4-201ENST00000194152 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
PCDHB4-201ENST00000194152 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
PCDHB4-201ENST00000194152 WWC1Q8IX03 1113 aa16.4■□□□□ 0.22
PCDHB4-201ENST00000194152 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
PCDHB4-201ENST00000194152 TPRNQ4KMQ1 711 aa16.39■□□□□ 0.21
PCDHB4-201ENST00000194152 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
PCDHB4-201ENST00000194152 AMPHP49418 695 aa16.39■□□□□ 0.21
PCDHB4-201ENST00000194152 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
PCDHB4-201ENST00000194152 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
PCDHB4-201ENST00000194152 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
PCDHB4-201ENST00000194152 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
PCDHB4-201ENST00000194152 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
PCDHB4-201ENST00000194152 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
PCDHB4-201ENST00000194152 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
PCDHB4-201ENST00000194152 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
PCDHB4-201ENST00000194152 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
PCDHB4-201ENST00000194152 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
PCDHB4-201ENST00000194152 BCORL1Q5H9F3 1711 aa16.35■□□□□ 0.21
PCDHB4-201ENST00000194152 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
PCDHB4-201ENST00000194152 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
PCDHB4-201ENST00000194152 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.21
PCDHB4-201ENST00000194152 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
PCDHB4-201ENST00000194152 NUDT16Q96DE0 195 aaKnown RBP16.32■□□□□ 0.2
PCDHB4-201ENST00000194152 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
PCDHB4-201ENST00000194152 RTF1Q92541 710 aaKnown RBP16.32■□□□□ 0.2
PCDHB4-201ENST00000194152 NLRP6P59044 892 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 BECN1Q14457 450 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 ZCCHC11Q5TAX3 1644 aaKnown RBP16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 ATP10AO60312 1499 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 ZNF518AQ6AHZ1 1483 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 FYB1O15117 783 aa16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
PCDHB4-201ENST00000194152 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
PCDHB4-201ENST00000194152 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
PCDHB4-201ENST00000194152 MAGI2Q86UL8 1455 aa16.3■□□□□ 0.2
PCDHB4-201ENST00000194152 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
PCDHB4-201ENST00000194152 NPATQ14207 1427 aa16.29■□□□□ 0.2
PCDHB4-201ENST00000194152 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
PCDHB4-201ENST00000194152 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
PCDHB4-201ENST00000194152 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
PCDHB4-201ENST00000194152 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
PCDHB4-201ENST00000194152 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.2
PCDHB4-201ENST00000194152 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
PCDHB4-201ENST00000194152 COL17A1Q9UMD9 1497 aaPredicted RBP16.27■□□□□ 0.2
PCDHB4-201ENST00000194152 NOB1Q9ULX3 412 aaKnown RBP16.27■□□□□ 0.2
PCDHB4-201ENST00000194152 TRIM44Q96DX7 344 aaPredicted RBP16.26■□□□□ 0.19
PCDHB4-201ENST00000194152 PREX2Q70Z35 1606 aa16.26■□□□□ 0.19
PCDHB4-201ENST00000194152 KDM5CP41229 1560 aa16.26■□□□□ 0.19
PCDHB4-201ENST00000194152 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
PCDHB4-201ENST00000194152 MCM10Q7L590 875 aa16.26■□□□□ 0.19
PCDHB4-201ENST00000194152 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
PCDHB4-201ENST00000194152 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
PCDHB4-201ENST00000194152 RRAGDQ9NQL2 400 aaPredicted RBP16.25■□□□□ 0.19
PCDHB4-201ENST00000194152 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
PCDHB4-201ENST00000194152 IGHDP01880 384 aa16.25■□□□□ 0.19
PCDHB4-201ENST00000194152 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
PCDHB4-201ENST00000194152 MAST1Q9Y2H9 1570 aa16.24■□□□□ 0.19
PCDHB4-201ENST00000194152 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
PCDHB4-201ENST00000194152 ARHGEF5Q12774 1597 aa16.24■□□□□ 0.19
PCDHB4-201ENST00000194152 RLBP1P12271 317 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 AEBP1Q8IUX7 1158 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
PCDHB4-201ENST00000194152 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 ABCC1P33527 1531 aa16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 MS4A1P11836 297 aa16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 AMOTL2Q9Y2J4 779 aa16.22■□□□□ 0.19
PCDHB4-201ENST00000194152 CSB-PGBD3P0DP91 1061 aa16.21■□□□□ 0.19
PCDHB4-201ENST00000194152 PSME1Q06323 249 aa16.21■□□□□ 0.19
PCDHB4-201ENST00000194152 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.19
PCDHB4-201ENST00000194152 WASLO00401 505 aaPredicted RBP16.2■□□□□ 0.18
PCDHB4-201ENST00000194152 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
PCDHB4-201ENST00000194152 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
PCDHB4-201ENST00000194152 GPRASP1Q5JY77 1395 aa16.2■□□□□ 0.18
PCDHB4-201ENST00000194152 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.2■□□□□ 0.18
PCDHB4-201ENST00000194152 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms