RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 ANTXR1Q9H6X2 564 aa21.12■□□□□ 0.97
CTDP1-201ENST00000075430 CHMP5Q9NZZ3 219 aa21.12■□□□□ 0.97
CTDP1-201ENST00000075430 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
CTDP1-201ENST00000075430 ADCY10Q96PN6 1610 aa21.11■□□□□ 0.97
CTDP1-201ENST00000075430 RUNDC1Q96C34 613 aa21.11■□□□□ 0.97
CTDP1-201ENST00000075430 ZKSCAN2Q63HK3 967 aa21.11■□□□□ 0.97
CTDP1-201ENST00000075430 RBM42Q9BTD8 480 aaKnown RBP21.11■□□□□ 0.97
CTDP1-201ENST00000075430 CROCC2H7BZ55 1655 aa21.1■□□□□ 0.97
CTDP1-201ENST00000075430 FBLN1P23142 703 aa21.1■□□□□ 0.97
CTDP1-201ENST00000075430 TRMT2AQ8IZ69 625 aaKnown RBP21.09■□□□□ 0.97
CTDP1-201ENST00000075430 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
CTDP1-201ENST00000075430 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
CTDP1-201ENST00000075430 MLECQ14165 292 aa21.08■□□□□ 0.97
CTDP1-201ENST00000075430 GGNBP2Q9H3C7 697 aa21.08■□□□□ 0.97
CTDP1-201ENST00000075430 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.96
CTDP1-201ENST00000075430 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
CTDP1-201ENST00000075430 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
CTDP1-201ENST00000075430 GRPEL1Q9HAV7 217 aa21.07■□□□□ 0.96
CTDP1-201ENST00000075430 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
CTDP1-201ENST00000075430 NOB1Q9ULX3 412 aaKnown RBP21.06■□□□□ 0.96
CTDP1-201ENST00000075430 MVPQ14764 893 aaKnown RBP21.05■□□□□ 0.96
CTDP1-201ENST00000075430 GLIPR1L2Q4G1C9 344 aa21.05■□□□□ 0.96
CTDP1-201ENST00000075430 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
CTDP1-201ENST00000075430 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
CTDP1-201ENST00000075430 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
CTDP1-201ENST00000075430 ABCC2Q92887 1545 aa21.04■□□□□ 0.96
CTDP1-201ENST00000075430 CHD1O14646 1710 aa21.04■□□□□ 0.96
CTDP1-201ENST00000075430 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
CTDP1-201ENST00000075430 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
CTDP1-201ENST00000075430 TRIM27P14373 513 aa21.03■□□□□ 0.96
CTDP1-201ENST00000075430 FOXD4L6Q3SYB3 417 aaPredicted RBP21.03■□□□□ 0.96
CTDP1-201ENST00000075430 FOXD4L3Q6VB84 417 aaPredicted RBP21.03■□□□□ 0.96
CTDP1-201ENST00000075430 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
CTDP1-201ENST00000075430 RBM10P98175 930 aaKnown RBP21.03■□□□□ 0.96
CTDP1-201ENST00000075430 THUMPD2Q9BTF0 503 aaKnown RBP21.03■□□□□ 0.96
CTDP1-201ENST00000075430 GAS2L3Q86XJ1 694 aa21.02■□□□□ 0.96
CTDP1-201ENST00000075430 MPNDQ8N594 471 aa21.02■□□□□ 0.96
CTDP1-201ENST00000075430 ESPNB1AK53 854 aa21.01■□□□□ 0.95
CTDP1-201ENST00000075430 TNPO1Q92973 898 aaKnown RBP21.01■□□□□ 0.95
CTDP1-201ENST00000075430 FANCAO15360 1455 aa21.01■□□□□ 0.95
CTDP1-201ENST00000075430 PREX2Q70Z35 1606 aa21.01■□□□□ 0.95
CTDP1-201ENST00000075430 PKNOX2Q96KN3 472 aa21■□□□□ 0.95
CTDP1-201ENST00000075430 NSD3Q9BZ95 1437 aa21■□□□□ 0.95
CTDP1-201ENST00000075430 ERBB4Q15303 1308 aa20.99■□□□□ 0.95
CTDP1-201ENST00000075430 MRE11P49959 708 aa20.99■□□□□ 0.95
CTDP1-201ENST00000075430 ZMYND15Q9H091 742 aa20.99■□□□□ 0.95
CTDP1-201ENST00000075430 MINK1Q8N4C8 1332 aaPredicted RBP20.99■□□□□ 0.95
CTDP1-201ENST00000075430 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
CTDP1-201ENST00000075430 ADGRL1O94910 1474 aa20.99■□□□□ 0.95
CTDP1-201ENST00000075430 CFAP65Q6ZU64 1925 aaKnown RBP20.98■□□□□ 0.95
CTDP1-201ENST00000075430 TRPM1Q7Z4N2 1603 aa20.98■□□□□ 0.95
CTDP1-201ENST00000075430 DDX49Q9Y6V7 483 aaKnown RBP20.98■□□□□ 0.95
CTDP1-201ENST00000075430 RIPK4P57078 832 aa20.98■□□□□ 0.95
CTDP1-201ENST00000075430 NOL8Q76FK4 1167 aaKnown RBP20.98■□□□□ 0.95
CTDP1-201ENST00000075430 CHAMP1Q96JM3 812 aa20.97■□□□□ 0.95
CTDP1-201ENST00000075430 CD2BP2O95400 341 aaKnown RBP20.97■□□□□ 0.95
CTDP1-201ENST00000075430 SSFA2P28290 1259 aa20.96■□□□□ 0.95
CTDP1-201ENST00000075430 UGGT1Q9NYU2 1555 aa20.96■□□□□ 0.95
CTDP1-201ENST00000075430 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
CTDP1-201ENST00000075430 ANP32BQ92688 251 aaKnown RBP20.96■□□□□ 0.95
CTDP1-201ENST00000075430 SCAF11Q99590 1463 aaKnown RBP20.95■□□□□ 0.94
CTDP1-201ENST00000075430 HMOX1P09601 288 aa20.95■□□□□ 0.94
CTDP1-201ENST00000075430 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
CTDP1-201ENST00000075430 E9PCH4 1651 aa20.94■□□□□ 0.94
CTDP1-201ENST00000075430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.94■□□□□ 0.94
CTDP1-201ENST00000075430 NOS1P29475 1434 aa20.94■□□□□ 0.94
CTDP1-201ENST00000075430 INSRP06213 1382 aa20.94■□□□□ 0.94
CTDP1-201ENST00000075430 DDX11L8A8MPP1 907 aa20.93■□□□□ 0.94
CTDP1-201ENST00000075430 ATF7IPQ6VMQ6 1270 aa20.92■□□□□ 0.94
CTDP1-201ENST00000075430 GBP4Q96PP9 640 aa20.92■□□□□ 0.94
CTDP1-201ENST00000075430 CLCN1P35523 988 aa20.92■□□□□ 0.94
CTDP1-201ENST00000075430 MCTP1Q6DN14 999 aa20.92■□□□□ 0.94
CTDP1-201ENST00000075430 DDX19BQ9UMR2 479 aa20.91■□□□□ 0.94
CTDP1-201ENST00000075430 FAM13BQ9NYF5 915 aa20.91■□□□□ 0.94
CTDP1-201ENST00000075430 PIK3C2GO75747 1445 aa20.9■□□□□ 0.94
CTDP1-201ENST00000075430 ATP10AO60312 1499 aa20.9■□□□□ 0.94
CTDP1-201ENST00000075430 MYO5CQ9NQX4 1742 aa20.9■□□□□ 0.94
CTDP1-201ENST00000075430 PRDM15P57071 1507 aaPredicted RBP20.9■□□□□ 0.94
CTDP1-201ENST00000075430 FSD2A1L4K1 749 aa20.89■□□□□ 0.94
CTDP1-201ENST00000075430 CAVIN1Q6NZI2 390 aaKnown RBP20.89■□□□□ 0.94
CTDP1-201ENST00000075430 MAST1Q9Y2H9 1570 aa20.89■□□□□ 0.93
CTDP1-201ENST00000075430 WDR63Q8IWG1 891 aa20.88■□□□□ 0.93
CTDP1-201ENST00000075430 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
CTDP1-201ENST00000075430 ASXL2Q76L83 1435 aa20.88■□□□□ 0.93
CTDP1-201ENST00000075430 RNF214Q8ND24 703 aa20.87■□□□□ 0.93
CTDP1-201ENST00000075430 GOLGA6L22H0YM25 854 aa20.87■□□□□ 0.93
CTDP1-201ENST00000075430 MSNP26038 577 aaKnown RBP20.87■□□□□ 0.93
CTDP1-201ENST00000075430 TMPOP42166 694 aaKnown RBP20.87■□□□□ 0.93
CTDP1-201ENST00000075430 NASPP49321 788 aaPredicted RBP20.87■□□□□ 0.93
CTDP1-201ENST00000075430 SOX12O15370 315 aa20.86■□□□□ 0.93
CTDP1-201ENST00000075430 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
CTDP1-201ENST00000075430 R3HCC1Q9Y3T6 440 aaKnown RBP20.86■□□□□ 0.93
CTDP1-201ENST00000075430 CHD1LQ86WJ1 897 aa20.86■□□□□ 0.93
CTDP1-201ENST00000075430 ATAD2Q6PL18 1390 aa20.85■□□□□ 0.93
CTDP1-201ENST00000075430 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
CTDP1-201ENST00000075430 NUTM2FA1L443 756 aa20.84■□□□□ 0.93
CTDP1-201ENST00000075430 VGFO15240 615 aaPredicted RBP20.84■□□□□ 0.93
CTDP1-201ENST00000075430 STAC3Q96MF2 364 aa20.84■□□□□ 0.93
CTDP1-201ENST00000075430 ZCCHC11Q5TAX3 1644 aaKnown RBP20.84■□□□□ 0.93
CTDP1-201ENST00000075430 IDI1Q13907 227 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms