RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 GTT1P40582 234 aa1.28□□□□□ -2.2
snR43snR43 OST2P46964 130 aa1.28□□□□□ -2.2
snR43snR43 YJR128WP47162 119 aa1.28□□□□□ -2.2
snR43snR43 CNL1Q06333 122 aa1.28□□□□□ -2.2
snR43snR43 TDA8Q6B2U8 126 aa1.28□□□□□ -2.2
snR43snR43 SCS22Q6Q595 175 aa1.28□□□□□ -2.2
snR43snR43 SEC11P15367 167 aa1.27□□□□□ -2.21
snR43snR43 MRPL44P19956 98 aa1.27□□□□□ -2.21
snR43snR43 PAU23Q07987 124 aa1.27□□□□□ -2.21
snR43snR43 YDL157CQ12082 118 aa1.27□□□□□ -2.21
snR43snR43 DSE2P38844 325 aa1.26□□□□□ -2.21
snR43snR43 RPS29AP41057 56 aaKnown RBP1.26□□□□□ -2.21
snR43snR43 SHH4Q06236 168 aa1.26□□□□□ -2.21
snR43snR43 FYV7Q12247 151 aa1.26□□□□□ -2.21
snR43snR43 YOR034C-AQ3E735 80 aa1.26□□□□□ -2.21
snR43snR43 YAL067W-AQ8TGK6 75 aa1.26□□□□□ -2.21
snR43snR43 NHP2P32495 156 aaPredicted RBP1.25□□□□□ -2.21
snR43snR43 YHR130CP38834 111 aa1.25□□□□□ -2.21
snR43snR43 MPC3P53311 146 aa1.25□□□□□ -2.21
snR43snR43 RSM19P53733 91 aaPredicted RBP1.25□□□□□ -2.21
snR43snR43 RPS29BP41058 56 aaKnown RBP1.24□□□□□ -2.21
snR43snR43 YAR1P46683 200 aa1.24□□□□□ -2.21
snR43snR43 YJL009WP47078 108 aa1.24□□□□□ -2.21
snR43snR43 YGL230CP53074 147 aa1.24□□□□□ -2.21
snR43snR43 CWC27Q02770 301 aa1.24□□□□□ -2.21
snR43snR43 YLR162WQ06235 118 aa1.24□□□□□ -2.21
snR43snR43 YHR073W-AP0C5N7 58 aa1.23□□□□□ -2.21
snR43snR43 CUE4Q04201 117 aaPredicted RBP1.23□□□□□ -2.21
snR43snR43 MSL1P40567 111 aaPredicted RBP1.22□□□□□ -2.21
snR43snR43 COF1Q03048 143 aaKnown RBP1.22□□□□□ -2.21
snR43snR43 COA6Q3E846 104 aa1.22□□□□□ -2.21
snR43snR43 MIC10Q96VH5 97 aa1.22□□□□□ -2.21
snR43snR43 HUR1P45820 110 aa1.21□□□□□ -2.22
snR43snR43 YGR164WP53291 111 aa1.21□□□□□ -2.22
snR43snR43 ECM19Q06011 112 aa1.21□□□□□ -2.22
snR43snR43 YGL034CP53186 121 aa1.2□□□□□ -2.22
snR43snR43 YHR213W-BQ8TGK1 99 aa1.2□□□□□ -2.22
snR43snR43 YFR009W-AP0C5M9 85 aa1.19□□□□□ -2.22
snR43snR43 YER187WP40102 141 aa1.19□□□□□ -2.22
snR43snR43 EDC1P53080 175 aaPredicted RBP1.19□□□□□ -2.22
snR43snR43 CGR1P53188 120 aa1.19□□□□□ -2.22
snR43snR43 ELC1Q03071 99 aa1.19□□□□□ -2.22
snR43snR43 TSC3Q3E790 80 aa1.19□□□□□ -2.22
snR43snR43 YJL133C-AQ3E7A3 74 aa1.19□□□□□ -2.22
snR43snR43 YIL134C-AQ45U18 67 aa1.19□□□□□ -2.22
snR43snR43 YJR107C-AP0CT86 78 aa1.18□□□□□ -2.22
snR43snR43 SSS1P35179 80 aa1.18□□□□□ -2.22
snR43snR43 POP7P38291 140 aa1.17□□□□□ -2.22
snR43snR43 ICS3P47034 131 aa1.17□□□□□ -2.22
snR43snR43 ATP18P81450 59 aa1.17□□□□□ -2.22
snR43snR43 SEN15Q04675 128 aa1.17□□□□□ -2.22
snR43snR43 LSM6Q06406 86 aaKnown RBP1.17□□□□□ -2.22
snR43snR43 YPR153WQ06537 140 aa1.17□□□□□ -2.22
snR43snR43 YBR016WP38216 128 aa1.16□□□□□ -2.22
snR43snR43 COX23P38824 151 aa1.16□□□□□ -2.22
snR43snR43 YER181CP40097 107 aa1.16□□□□□ -2.22
snR43snR43 YLR296WQ05898 108 aa1.16□□□□□ -2.22
snR43snR43 NAT5Q08689 176 aa1.16□□□□□ -2.22
snR43snR43 YLR361C-AQ3E795 98 aa1.16□□□□□ -2.22
snR43snR43 YOR316C-AQ3E806 69 aa1.16□□□□□ -2.22
snR43snR43 YPL080CQ02826 108 aa1.15□□□□□ -2.23
snR43snR43 RPL36AP05745 100 aaPredicted RBP1.14□□□□□ -2.23
snR43snR43 ISD11Q6Q560 94 aa1.14□□□□□ -2.23
snR43snR43 PAI3P01094 68 aa1.13□□□□□ -2.23
snR43snR43 YJL144WP47009 104 aa1.13□□□□□ -2.23
snR43snR43 YOL014WQ08110 124 aa1.13□□□□□ -2.23
snR43snR43 YLR255CO13574 117 aa1.12□□□□□ -2.23
snR43snR43 YAR064WP39563 99 aa1.12□□□□□ -2.23
snR43snR43 SKI6P46948 246 aaPredicted RBP1.12□□□□□ -2.23
snR43snR43 YDR381C-AQ3E6R5 114 aa1.12□□□□□ -2.23
snR43snR43 YLR363W-AQ3E747 85 aa1.12□□□□□ -2.23
snR43snR43 YCR050CP25630 102 aa1.11□□□□□ -2.23
snR43snR43 YML054C-AQ3E809 52 aa1.11□□□□□ -2.23
snR43snR43 YOR304C-AO14468 76 aa1.1□□□□□ -2.23
snR43snR43 RPL37AP49166 88 aaKnown RBP1.1□□□□□ -2.23
snR43snR43 LIP1Q03579 150 aa1.1□□□□□ -2.23
snR43snR43 YML108WQ03759 105 aa1.09□□□□□ -2.23
snR43snR43 YHL042WP38729 150 aa1.08□□□□□ -2.24
snR43snR43 TDA2P40045 126 aa1.08□□□□□ -2.24
snR43snR43 YDL085C-AQ3E7B7 68 aaKnown RBP1.07□□□□□ -2.24
snR43snR43 YBL008W-AQ3E821 79 aa1.07□□□□□ -2.24
snR43snR43 RAD6P06104 172 aa1.06□□□□□ -2.24
snR43snR43 RPL38P49167 78 aaKnown RBP1.06□□□□□ -2.24
snR43snR43 ATP20Q12233 115 aa1.06□□□□□ -2.24
snR43snR43 YIL102C-AQ2V2P5 75 aa1.06□□□□□ -2.24
snR43snR43 RPA12P32529 125 aaKnown RBP1.05□□□□□ -2.24
snR43snR43 SAE3P89114 91 aa1.05□□□□□ -2.24
snR43snR43 GLC8P41818 229 aa1.04□□□□□ -2.24
snR43snR43 YGR146C-AQ8TGT9 53 aa1.04□□□□□ -2.24
snR43snR43 COX8P04039 78 aa1.03□□□□□ -2.24
snR43snR43 YBL044WP38194 122 aa1.03□□□□□ -2.24
snR43snR43 YNL198CP40166 100 aa1.03□□□□□ -2.24
snR43snR43 PBI2P0CT04 75 aaKnown RBP1.02□□□□□ -2.25
snR43snR43 YGR039WP53225 103 aa1.01□□□□□ -2.25
snR43snR43 TIM11P81449 96 aaPredicted RBP1.01□□□□□ -2.25
snR43snR43 YIL156W-BQ2V2P4 73 aa1.01□□□□□ -2.25
snR43snR43 RPS30AP0CX33 63 aaKnown RBP1□□□□□ -2.25
snR43snR43 RPS30BP0CX34 63 aaKnown RBP1□□□□□ -2.25
snR43snR43 AIM4P38305 123 aaPredicted RBP1□□□□□ -2.25
snR43snR43 YKL065W-AQ2V2P2 73 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms