RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C ERV14P53173 138 aa2.38□□□□□ -2.03
SPN1YPR133C POP3P53833 195 aaPredicted RBP2.38□□□□□ -2.03
SPN1YPR133C YKL023C-AQ2V2P3 75 aa2.38□□□□□ -2.03
SPN1YPR133C RPS22BQ3E7Y3 130 aaKnown RBP2.38□□□□□ -2.03
SPN1YPR133C YGR121W-AQ3E816 71 aa2.38□□□□□ -2.03
SPN1YPR133C SCS22Q6Q595 175 aa2.38□□□□□ -2.03
SPN1YPR133C INO4P13902 151 aa2.37□□□□□ -2.03
SPN1YPR133C SRB6P32570 121 aa2.37□□□□□ -2.03
SPN1YPR133C AIM11P87275 137 aa2.37□□□□□ -2.03
SPN1YPR133C YDL012CQ12489 107 aa2.37□□□□□ -2.03
SPN1YPR133C GSP2P32836 220 aaKnown RBP2.36□□□□□ -2.03
SPN1YPR133C YHL018WP38744 120 aaPredicted RBP2.36□□□□□ -2.03
SPN1YPR133C YJL144WP47009 104 aa2.36□□□□□ -2.03
SPN1YPR133C DDR2P89113 61 aa2.36□□□□□ -2.03
SPN1YPR133C CYT2Q00873 224 aa2.36□□□□□ -2.03
SPN1YPR133C RPL29P05747 59 aaPredicted RBP2.35□□□□□ -2.03
SPN1YPR133C YCR050CP25630 102 aa2.35□□□□□ -2.03
SPN1YPR133C SAE3P89114 91 aa2.35□□□□□ -2.03
SPN1YPR133C YML079WQ03629 201 aa2.35□□□□□ -2.03
SPN1YPR133C COX8P04039 78 aa2.34□□□□□ -2.03
SPN1YPR133C GSP1P32835 219 aaKnown RBP2.34□□□□□ -2.03
SPN1YPR133C YEL067CP39978 195 aa2.34□□□□□ -2.03
SPN1YPR133C YLL006W-AQ3E814 58 aa2.34□□□□□ -2.03
SPN1YPR133C HAP3P13434 144 aa2.33□□□□□ -2.04
SPN1YPR133C LSM8P47093 109 aaKnown RBP2.33□□□□□ -2.04
SPN1YPR133C YNL190WP53872 204 aa2.33□□□□□ -2.04
SPN1YPR133C YNL042W-BQ3E7Z2 85 aa2.33□□□□□ -2.04
SPN1YPR133C QCR8P08525 94 aa2.32□□□□□ -2.04
SPN1YPR133C YHL042WP38729 150 aa2.32□□□□□ -2.04
SPN1YPR133C VMA21P41806 77 aa2.32□□□□□ -2.04
SPN1YPR133C YMR103CQ04436 120 aa2.31□□□□□ -2.04
SPN1YPR133C FYV7Q12247 151 aa2.31□□□□□ -2.04
SPN1YPR133C YDL022C-AP0C5L6 82 aa2.3□□□□□ -2.04
SPN1YPR133C ATG8P38182 117 aaRIP-Chip data2.3□□□□□ -2.04not detected
SPN1YPR133C DSE2P38844 325 aa2.3□□□□□ -2.04
SPN1YPR133C MRPS12P53732 153 aa2.3□□□□□ -2.04
SPN1YPR133C BSC4P53841 131 aa2.3□□□□□ -2.04
SPN1YPR133C MRPL11P36521 249 aaPredicted RBP2.29□□□□□ -2.04
SPN1YPR133C YBR027CP38220 110 aa2.29□□□□□ -2.04
SPN1YPR133C SOM1Q05676 74 aa2.29□□□□□ -2.04
SPN1YPR133C HPA2Q06592 156 aa2.29□□□□□ -2.04
SPN1YPR133C YBR230W-AQ3E762 66 aa2.29□□□□□ -2.04
SPN1YPR133C YOR376W-AQ3E805 51 aa2.29□□□□□ -2.04
SPN1YPR133C FYV5P25585 152 aa2.28□□□□□ -2.04
SPN1YPR133C YHL005CP38752 130 aa2.28□□□□□ -2.04
SPN1YPR133C YNL122CP53921 115 aaPredicted RBP2.28□□□□□ -2.04
SPN1YPR133C YDL157CQ12082 118 aa2.28□□□□□ -2.04
SPN1YPR133C YHR007C-AQ07074 71 aa2.27□□□□□ -2.05
SPN1YPR133C YJL127C-BQ3E828 52 aa2.27□□□□□ -2.05
SPN1YPR133C QCR10P37299 77 aa2.26□□□□□ -2.05
SPN1YPR133C YPL261CQ08976 102 aa2.26□□□□□ -2.05
SPN1YPR133C YGL230CP53074 147 aa2.25□□□□□ -2.05
SPN1YPR133C YOR072WQ08486 104 aa2.25□□□□□ -2.05
SPN1YPR133C YPR153WQ06537 140 aa2.24□□□□□ -2.05
SPN1YPR133C COX7P10174 60 aa2.23□□□□□ -2.05
SPN1YPR133C CWC27Q02770 301 aa2.23□□□□□ -2.05
SPN1YPR133C ICY1Q04329 127 aa2.23□□□□□ -2.05
SPN1YPR133C IRC21Q04772 201 aa2.23□□□□□ -2.05
SPN1YPR133C MRPL44P19956 98 aa2.22□□□□□ -2.05
SPN1YPR133C RGM1Q00453 211 aa2.22□□□□□ -2.05
SPN1YPR133C PAU17Q12370 124 aa2.22□□□□□ -2.05
SPN1YPR133C YKL044WP36092 106 aa2.21□□□□□ -2.06
SPN1YPR133C YEL014CP39999 101 aa2.21□□□□□ -2.06
SPN1YPR133C ZEO1Q08245 113 aa2.21□□□□□ -2.06
SPN1YPR133C RPL36BO14455 100 aaKnown RBP2.2□□□□□ -2.06
SPN1YPR133C FUN14P18411 198 aa2.2□□□□□ -2.06
SPN1YPR133C TDA2P40045 126 aa2.2□□□□□ -2.06
SPN1YPR133C NAT5Q08689 176 aa2.2□□□□□ -2.06
SPN1YPR133C YLR162WQ06235 118 aa2.19□□□□□ -2.06
SPN1YPR133C YHR086W-AQ3E746 53 aa2.19□□□□□ -2.06
SPN1YPR133C YOR034C-AQ3E735 80 aa2.15□□□□□ -2.07
SPN1YPR133C Q0017Q9ZZX8 53 aa2.15□□□□□ -2.07
SPN1YPR133C YLR157W-DP0CE99 70 aa2.14□□□□□ -2.07
SPN1YPR133C YHR130CP38834 111 aa2.14□□□□□ -2.07
SPN1YPR133C RSM18P40033 138 aa2.14□□□□□ -2.07
SPN1YPR133C GTT1P40582 234 aa2.14□□□□□ -2.07
SPN1YPR133C YGR164WP53291 111 aa2.14□□□□□ -2.07
SPN1YPR133C PAU23Q07987 124 aa2.14□□□□□ -2.07
SPN1YPR133C YOL097W-AQ3E7Y9 61 aa2.13□□□□□ -2.07
SPN1YPR133C YDR210WQ03482 75 aa2.12□□□□□ -2.07
SPN1YPR133C YJR128WP47162 119 aa2.11□□□□□ -2.07
SPN1YPR133C YER187WP40102 141 aa2.1□□□□□ -2.07
SPN1YPR133C YLR296WQ05898 108 aa2.09□□□□□ -2.07
SPN1YPR133C OST5Q92316 86 aa2.09□□□□□ -2.07
SPN1YPR133C RPL36AP05745 100 aaPredicted RBP2.08□□□□□ -2.08
SPN1YPR133C YGL014C-AP0C5N1 53 aa2.08□□□□□ -2.08
SPN1YPR133C RPS29AP41057 56 aaKnown RBP2.08□□□□□ -2.08
SPN1YPR133C YFL065CP43539 102 aa2.08□□□□□ -2.08
SPN1YPR133C YJL009WP47078 108 aa2.07□□□□□ -2.08
SPN1YPR133C SEN15Q04675 128 aa2.07□□□□□ -2.08
SPN1YPR133C RSM19P53733 91 aaPredicted RBP2.06□□□□□ -2.08
SPN1YPR133C MIC10Q96VH5 97 aa2.06□□□□□ -2.08
SPN1YPR133C MSL1P40567 111 aaPredicted RBP2.05□□□□□ -2.08
SPN1YPR133C HUR1P45820 110 aa2.05□□□□□ -2.08
SPN1YPR133C COA6Q3E846 104 aa2.05□□□□□ -2.08
SPN1YPR133C AIM4P38305 123 aaPredicted RBP2.04□□□□□ -2.08
SPN1YPR133C RPS29BP41058 56 aaKnown RBP2.04□□□□□ -2.08
SPN1YPR133C YMR122CQ03879 124 aa2.04□□□□□ -2.08
SPN1YPR133C NHP2P32495 156 aaPredicted RBP2.03□□□□□ -2.08
SPN1YPR133C YIL134C-AQ45U18 67 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms