RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	FYV5	P25585	152 aa		4.86	□□□□□ -1.63
SNT309	YPR101W	TDA2	P40045	126 aa		4.85	□□□□□ -1.63
SNT309	YPR101W	YLR281C	Q05863	155 aa		4.85	□□□□□ -1.63
SNT309	YPR101W	YBR230W-A	Q3E762	66 aa		4.85	□□□□□ -1.63
SNT309	YPR101W	DIF1	O13577	133 aa		4.84	□□□□□ -1.63
SNT309	YPR101W	YKL183C-A	Q3E765	70 aa		4.84	□□□□□ -1.63
SNT309	YPR101W	YJL127C-B	Q3E828	52 aa		4.84	□□□□□ -1.63
SNT309	YPR101W	IGD1	P43598	195 aa		4.83	□□□□□ -1.64
SNT309	YPR101W	RPL38	P49167	78 aa	Known RBP	4.83	□□□□□ -1.64
SNT309	YPR101W	YLR307C-A	Q3E825	87 aa		4.83	□□□□□ -1.64
SNT309	YPR101W	YLL066W-B	Q8TGJ7	56 aa		4.83	□□□□□ -1.64
SNT309	YPR101W	TOR1	P35169	2470 aa		4.83	□□□□□ -1.64
SNT309	YPR101W	YLR415C	O13578	112 aa		4.82	□□□□□ -1.64
SNT309	YPR101W	RTC6	O14464	93 aa		4.82	□□□□□ -1.64
SNT309	YPR101W	YCL042W	P25572	119 aa		4.82	□□□□□ -1.64
SNT309	YPR101W	RSM18	P40033	138 aa		4.82	□□□□□ -1.64
SNT309	YPR101W	YER187W	P40102	141 aa		4.81	□□□□□ -1.64
SNT309	YPR101W	YLR361C-A	Q3E795	98 aa		4.81	□□□□□ -1.64
SNT309	YPR101W	YNL042W-B	Q3E7Z2	85 aa		4.81	□□□□□ -1.64
SNT309	YPR101W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SNT309	YPR101W	ICS3	P47034	131 aa		4.8	□□□□□ -1.64
SNT309	YPR101W	ATP20	Q12233	115 aa		4.8	□□□□□ -1.64
SNT309	YPR101W	YDR246W-A	Q3E763	66 aa		4.8	□□□□□ -1.64
SNT309	YPR101W	BET1	P22804	142 aa		4.79	□□□□□ -1.64
SNT309	YPR101W	COX23	P38824	151 aa		4.79	□□□□□ -1.64
SNT309	YPR101W	Q0032	Q9ZZX7	96 aa		4.79	□□□□□ -1.64
SNT309	YPR101W	EDC2	P40023	145 aa	Predicted RBP	4.78	□□□□□ -1.64
SNT309	YPR101W	YAR023C	D6VPM8	179 aa		4.77	□□□□□ -1.65
SNT309	YPR101W	AIM4	P38305	123 aa	Predicted RBP	4.77	□□□□□ -1.65
SNT309	YPR101W	YOR314W	Q12506	109 aa		4.77	□□□□□ -1.65
SNT309	YPR101W	YGL041C-B	Q3E750	60 aa		4.77	□□□□□ -1.65
SNT309	YPR101W	YHR213W-B	Q8TGK1	99 aa		4.77	□□□□□ -1.65
SNT309	YPR101W	RPL11A	P0C0W9	174 aa	Known RBP	4.76	□□□□□ -1.65
SNT309	YPR101W	YCR050C	P25630	102 aa		4.76	□□□□□ -1.65
SNT309	YPR101W	SNA2	P56508	79 aa		4.76	□□□□□ -1.65
SNT309	YPR101W	RRT15	Q3E811	62 aa		4.76	□□□□□ -1.65
SNT309	YPR101W	YER039C-A	P0CD97	72 aa		4.74	□□□□□ -1.65
SNT309	YPR101W	SPT4	P32914	102 aa	Predicted RBP	4.74	□□□□□ -1.65
SNT309	YPR101W	YOL014W	Q08110	124 aa		4.74	□□□□□ -1.65
SNT309	YPR101W	CUP1-1	P0CX80	61 aa		4.73	□□□□□ -1.65
SNT309	YPR101W	CUP1-2	P0CX81	61 aa		4.73	□□□□□ -1.65
SNT309	YPR101W	YJL133C-A	Q3E7A3	74 aa		4.73	□□□□□ -1.65
SNT309	YPR101W	YDR182W-A	Q3E796	67 aa		4.72	□□□□□ -1.65
SNT309	YPR101W	RPL36B	O14455	100 aa	Known RBP	4.71	□□□□□ -1.66
SNT309	YPR101W	RPL11B	Q3E757	174 aa	Predicted RBP	4.71	□□□□□ -1.66
SNT309	YPR101W	TDA8	Q6B2U8	126 aa		4.71	□□□□□ -1.66
SNT309	YPR101W	NOP10	Q6Q547	58 aa	Predicted RBP	4.71	□□□□□ -1.66
SNT309	YPR101W	UTP20	P35194	2493 aa	Known RBP	4.71	□□□□□ -1.66
SNT309	YPR101W	SBH1	P52870	82 aa		4.7	□□□□□ -1.66
SNT309	YPR101W	YGL193C	P53097	103 aa		4.7	□□□□□ -1.66
SNT309	YPR101W	ECM19	Q06011	112 aa		4.7	□□□□□ -1.66
SNT309	YPR101W	RPL36A	P05745	100 aa	Predicted RBP	4.69	□□□□□ -1.66
SNT309	YPR101W	DDR2	P89113	61 aa		4.69	□□□□□ -1.66
SNT309	YPR101W	AUA1	P32450	94 aa		4.68	□□□□□ -1.66
SNT309	YPR101W	HOT13	P36078	116 aa		4.68	□□□□□ -1.66
SNT309	YPR101W	YOR072W	Q08486	104 aa		4.68	□□□□□ -1.66
SNT309	YPR101W	PEX22	P39718	180 aa		4.67	□□□□□ -1.66
SNT309	YPR101W	BSC4	P53841	131 aa		4.67	□□□□□ -1.66
SNT309	YPR101W	YHR007C-A	Q07074	71 aa		4.67	□□□□□ -1.66
SNT309	YPR101W	YEL045C	P32616	141 aa		4.66	□□□□□ -1.66
SNT309	YPR101W	YLR162W	Q06235	118 aa		4.66	□□□□□ -1.66
SNT309	YPR101W	YOL166W-A	Q8TGJ1	51 aa		4.66	□□□□□ -1.66
SNT309	YPR101W	YBR182C-A	Q8TGU6	64 aa		4.66	□□□□□ -1.66
SNT309	YPR101W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	RIP-Chip
SNT309	YPR101W	NUM1	Q00402	2748 aa		4.64	□□□□□ -1.67
SNT309	YPR101W	MIC10	Q96VH5	97 aa		4.64	□□□□□ -1.67
SNT309	YPR101W	KTI11	Q3E840	82 aa		4.63	□□□□□ -1.67
SNT309	YPR101W	LIP1	Q03579	150 aa		4.61	□□□□□ -1.67
SNT309	YPR101W	YIL102C	P40488	101 aa		4.6	□□□□□ -1.67
SNT309	YPR101W	YJL197C-A	P0C5P0	93 aa		4.59	□□□□□ -1.67
SNT309	YPR101W	YHL005C	P38752	130 aa		4.59	□□□□□ -1.67
SNT309	YPR101W	YGR121W-A	Q3E816	71 aa		4.58	□□□□□ -1.68
SNT309	YPR101W	YDR034C-A	P0C289	58 aa		4.57	□□□□□ -1.68
SNT309	YPR101W	YAR064W	P39563	99 aa		4.57	□□□□□ -1.68
SNT309	YPR101W	YGR164W	P53291	111 aa		4.57	□□□□□ -1.68
SNT309	YPR101W	KSH1	Q8TGJ3	72 aa		4.57	□□□□□ -1.68
SNT309	YPR101W	YOL013W-A	P0C272	63 aa	Predicted RBP	4.56	□□□□□ -1.68
SNT309	YPR101W	RPS30A	P0CX33	63 aa	Known RBP	4.56	□□□□□ -1.68
SNT309	YPR101W	RPS30B	P0CX34	63 aa	Known RBP	4.56	□□□□□ -1.68
SNT309	YPR101W	YLR412C-A	Q3E742	68 aa		4.56	□□□□□ -1.68
SNT309	YPR101W	YBR121C-A	P0C5L4	52 aa		4.54	□□□□□ -1.68
SNT309	YPR101W	SPG1	P50088	95 aa		4.53	□□□□□ -1.68
SNT309	YPR101W	YMR230W-A	Q3E7B5	62 aa		4.53	□□□□□ -1.68
SNT309	YPR101W	YKL065W-A	Q2V2P2	73 aa		4.52	□□□□□ -1.69
SNT309	YPR101W	DYN1	P36022	4092 aa		4.51	□□□□□ -1.69
SNT309	YPR101W	RPS28B	P0C0X0	67 aa	Known RBP	4.51	□□□□□ -1.69
SNT309	YPR101W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.51	□□□□□ -1.69
SNT309	YPR101W	YLR157W-D	P0CE99	70 aa		4.5	□□□□□ -1.69
SNT309	YPR101W	YCR043C	P25361	127 aa		4.5	□□□□□ -1.69
SNT309	YPR101W	YJR085C	P47131	105 aa	Known RBP	4.5	□□□□□ -1.69
SNT309	YPR101W	YPR195C	Q06594	109 aa		4.5	□□□□□ -1.69
SNT309	YPR101W	YOL097W-A	Q3E7Y9	61 aa		4.49	□□□□□ -1.69
SNT309	YPR101W	YOR381W-A	Q3E804	55 aa		4.49	□□□□□ -1.69
SNT309	YPR101W	YBR027C	P38220	110 aa		4.48	□□□□□ -1.69
SNT309	YPR101W	YHR125W	P38831	101 aa		4.48	□□□□□ -1.69
SNT309	YPR101W	YPR153W	Q06537	140 aa		4.48	□□□□□ -1.69
SNT309	YPR101W	SDH6	Q3E785	79 aa		4.46	□□□□□ -1.7
SNT309	YPR101W	YMR122C	Q03879	124 aa		4.45	□□□□□ -1.7
SNT309	YPR101W	YOR268C	Q08734	132 aa		4.45	□□□□□ -1.7
SNT309	YPR101W	HUB1	Q6Q546	73 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms