RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W BET1P22804 142 aa6.22□□□□□ -1.41
BRR1YPR057W DDR2P89113 61 aa6.22□□□□□ -1.41
BRR1YPR057W GAT4P40569 121 aa6.21□□□□□ -1.42
BRR1YPR057W YAL063C-AQ3E791 96 aa6.2□□□□□ -1.42
BRR1YPR057W YFR009W-AP0C5M9 85 aa6.19□□□□□ -1.42
BRR1YPR057W GIS2P53849 153 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
BRR1YPR057W ISD11Q6Q560 94 aa6.19□□□□□ -1.42
BRR1YPR057W YAR1P46683 200 aa6.17□□□□□ -1.42
BRR1YPR057W YFL065CP43539 102 aa6.15□□□□□ -1.42
BRR1YPR057W RSM19P53733 91 aaPredicted RBP6.15□□□□□ -1.42
BRR1YPR057W BSC4P53841 131 aa6.15□□□□□ -1.42
BRR1YPR057W LCL1Q02786 101 aa6.15□□□□□ -1.42
BRR1YPR057W YPR203WQ08994 102 aa6.15□□□□□ -1.42
BRR1YPR057W YFL041W-AQ3E817 63 aa6.15□□□□□ -1.42
BRR1YPR057W RPL36BO14455 100 aaKnown RBP6.14□□□□□ -1.43
BRR1YPR057W KRE1P17260 313 aa6.14□□□□□ -1.43
BRR1YPR057W YHR007C-AQ07074 71 aa6.14□□□□□ -1.43
BRR1YPR057W RAD6P06104 172 aa6.13□□□□□ -1.43
BRR1YPR057W YOR072WQ08486 104 aa6.13□□□□□ -1.43
BRR1YPR057W YHR139C-AO13536 103 aa6.12□□□□□ -1.43
BRR1YPR057W EDC1P53080 175 aaPredicted RBP6.12□□□□□ -1.43
BRR1YPR057W YGR121W-AQ3E816 71 aa6.11□□□□□ -1.43
BRR1YPR057W ICS3P47034 131 aa6.1□□□□□ -1.43
BRR1YPR057W EMC6Q12431 108 aa6.1□□□□□ -1.43
BRR1YPR057W EDC2P40023 145 aaPredicted RBP6.09□□□□□ -1.43
BRR1YPR057W YHR213W-BQ8TGK1 99 aa6.09□□□□□ -1.43
BRR1YPR057W SOH1P38633 127 aa6.08□□□□□ -1.44
BRR1YPR057W SHH4Q06236 168 aa6.08□□□□□ -1.44
BRR1YPR057W TDA8Q6B2U8 126 aa6.08□□□□□ -1.44
BRR1YPR057W RPL38P49167 78 aaKnown RBP6.07□□□□□ -1.44
BRR1YPR057W SPG1P50088 95 aa6.07□□□□□ -1.44
BRR1YPR057W MMS2P53152 137 aa6.07□□□□□ -1.44
BRR1YPR057W YIL002W-AQ3E7Z5 69 aa6.07□□□□□ -1.44
BRR1YPR057W YLR415CO13578 112 aa6.06□□□□□ -1.44
BRR1YPR057W COX23P38824 151 aa6.06□□□□□ -1.44
BRR1YPR057W RSM18P40033 138 aa6.06□□□□□ -1.44
BRR1YPR057W TDA2P40045 126 aa6.06□□□□□ -1.44
BRR1YPR057W YHL042WP38729 150 aa6.05□□□□□ -1.44
BRR1YPR057W YJL133C-AQ3E7A3 74 aa6.04□□□□□ -1.44
BRR1YPR057W YMR230W-AQ3E7B5 62 aa6.03□□□□□ -1.44
BRR1YPR057W YBL112CQ3E7Y4 105 aa6.03□□□□□ -1.44
BRR1YPR057W YSY6P38374 65 aa6.02□□□□□ -1.45
BRR1YPR057W YJR085CP47131 105 aaKnown RBP6.02□□□□□ -1.45
BRR1YPR057W YLR285C-AQ3E771 56 aa6.02□□□□□ -1.45
BRR1YPR057W MDN1Q12019 4910 aaKnown RBP6.01□□□□□ -1.45
BRR1YPR057W YNL184CP53876 108 aa6.01□□□□□ -1.45
BRR1YPR057W ECM19Q06011 112 aa6.01□□□□□ -1.45
BRR1YPR057W YOL014WQ08110 124 aa6.01□□□□□ -1.45
BRR1YPR057W RPP2AP05319 106 aaKnown RBP6□□□□□ -1.45
BRR1YPR057W ATP20Q12233 115 aa6□□□□□ -1.45
BRR1YPR057W YLR162WQ06235 118 aa5.99□□□□□ -1.45
BRR1YPR057W MIC10Q96VH5 97 aa5.98□□□□□ -1.45
BRR1YPR057W YJL197C-AP0C5P0 93 aa5.97□□□□□ -1.45
BRR1YPR057W YEL045CP32616 141 aa5.97□□□□□ -1.45
BRR1YPR057W YBR027CP38220 110 aa5.97□□□□□ -1.45
BRR1YPR057W YOR268CQ08734 132 aa5.97□□□□□ -1.45
BRR1YPR057W YCR050CP25630 102 aa5.94□□□□□ -1.46
BRR1YPR057W COF1Q03048 143 aaKnown RBP5.94□□□□□ -1.46
BRR1YPR057W YDR119W-AQ2V2P9 66 aa5.94□□□□□ -1.46
BRR1YPR057W DDR48P18899 430 aaKnown RBP5.93□□□□□ -1.46
BRR1YPR057W YGL149WP53116 101 aa5.93□□□□□ -1.46
BRR1YPR057W YGR039WP53225 103 aa5.93□□□□□ -1.46
BRR1YPR057W YHL018WP38744 120 aaPredicted RBP5.91□□□□□ -1.46
BRR1YPR057W YBR182C-AQ8TGU6 64 aa5.91□□□□□ -1.46
BRR1YPR057W YKL183C-AQ3E765 70 aa5.9□□□□□ -1.46
BRR1YPR057W YPL038W-AQ3E7B4 63 aa5.88□□□□□ -1.47
BRR1YPR057W YOR304C-AO14468 76 aa5.87□□□□□ -1.47
BRR1YPR057W YLR157W-DP0CE99 70 aa5.87□□□□□ -1.47
BRR1YPR057W YOL097W-AQ3E7Y9 61 aa5.87□□□□□ -1.47
BRR1YPR057W HOT13P36078 116 aa5.85□□□□□ -1.47
BRR1YPR057W YCR043CP25361 127 aa5.82□□□□□ -1.48
BRR1YPR057W YOR314WQ12506 109 aa5.81□□□□□ -1.48
BRR1YPR057W YFL067WP43537 175 aa5.8□□□□□ -1.48
BRR1YPR057W YAR064WP39563 99 aa5.79□□□□□ -1.48
BRR1YPR057W YDR246W-AQ3E763 66 aa5.78□□□□□ -1.48
BRR1YPR057W KSH1Q8TGJ3 72 aa5.78□□□□□ -1.48
BRR1YPR057W RPL36AP05745 100 aaPredicted RBP5.77□□□□□ -1.49
BRR1YPR057W KTI11Q3E840 82 aa5.77□□□□□ -1.49
BRR1YPR057W NOP10Q6Q547 58 aaPredicted RBP5.77□□□□□ -1.49
BRR1YPR057W YPL080CQ02826 108 aa5.76□□□□□ -1.49
BRR1YPR057W YDR010CQ12426 110 aa5.75□□□□□ -1.49
BRR1YPR057W TOM6P33448 61 aa5.73□□□□□ -1.49
BRR1YPR057W YER187WP40102 141 aa5.73□□□□□ -1.49
BRR1YPR057W YHL005CP38752 130 aa5.72□□□□□ -1.49
BRR1YPR057W AIM4P38305 123 aaPredicted RBP5.71□□□□□ -1.5
BRR1YPR057W YOL013W-AP0C272 63 aaPredicted RBP5.7□□□□□ -1.5
BRR1YPR057W YDL012CQ12489 107 aa5.7□□□□□ -1.5
BRR1YPR057W LIP1Q03579 150 aa5.69□□□□□ -1.5
BRR1YPR057W YIL102CP40488 101 aa5.68□□□□□ -1.5
BRR1YPR057W YPR153WQ06537 140 aa5.67□□□□□ -1.5
BRR1YPR057W YOL166W-AQ8TGJ1 51 aa5.67□□□□□ -1.5
BRR1YPR057W YDR182W-AQ3E796 67 aa5.66□□□□□ -1.5
BRR1YPR057W YHR073W-AP0C5N7 58 aa5.65□□□□□ -1.5
BRR1YPR057W YLR361C-AQ3E795 98 aa5.61□□□□□ -1.51
BRR1YPR057W COX7P10174 60 aa5.6□□□□□ -1.51
BRR1YPR057W YKL069WP36088 180 aa5.59□□□□□ -1.51
BRR1YPR057W HHF1P02309 103 aaKnown RBP5.53□□□□□ -1.52
BRR1YPR057W YHR125WP38831 101 aa5.53□□□□□ -1.52
BRR1YPR057W YOR316C-AQ3E806 69 aa5.53□□□□□ -1.52
BRR1YPR057W YJR128WP47162 119 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms