RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W CMC4Q3E7A9 73 aa6.24□□□□□ -1.41
MSF1YPR047W YGR121W-AQ3E816 71 aa6.24□□□□□ -1.41
MSF1YPR047W YNL042W-BQ3E7Z2 85 aa6.23□□□□□ -1.41
MSF1YPR047W RPL26AP05743 127 aaKnown RBP6.22□□□□□ -1.41
MSF1YPR047W MSA2P36157 363 aa6.22□□□□□ -1.41
MSF1YPR047W RPL26BP53221 127 aaKnown RBP6.22□□□□□ -1.41
MSF1YPR047W ISD11Q6Q560 94 aa6.22□□□□□ -1.41
MSF1YPR047W YLR236CA0A023PZG4 107 aa6.21□□□□□ -1.42
MSF1YPR047W SPT4P32914 102 aaPredicted RBP6.2□□□□□ -1.42
MSF1YPR047W YFL065CP43539 102 aa6.2□□□□□ -1.42
MSF1YPR047W YPR203WQ08994 102 aa6.2□□□□□ -1.42
MSF1YPR047W KSH1Q8TGJ3 72 aa6.2□□□□□ -1.42
MSF1YPR047W KRE1P17260 313 aa6.19□□□□□ -1.42
MSF1YPR047W SKI6P46948 246 aaPredicted RBP6.18□□□□□ -1.42
MSF1YPR047W IRC21Q04772 201 aa6.18□□□□□ -1.42
MSF1YPR047W YAL063C-AQ3E791 96 aa6.18□□□□□ -1.42
MSF1YPR047W YDR381C-AQ3E6R5 114 aa6.17□□□□□ -1.42
MSF1YPR047W YOR034C-AQ3E735 80 aa6.17□□□□□ -1.42
MSF1YPR047W YKL069WP36088 180 aa6.16□□□□□ -1.42
MSF1YPR047W ICY1Q04329 127 aa6.16□□□□□ -1.42
MSF1YPR047W YBR230W-AQ3E762 66 aa6.16□□□□□ -1.42
MSF1YPR047W YFL041W-AQ3E817 63 aa6.16□□□□□ -1.42
MSF1YPR047W PBI2P0CT04 75 aaKnown RBP6.15□□□□□ -1.43
MSF1YPR047W YJL127C-BQ3E828 52 aa6.15□□□□□ -1.43
MSF1YPR047W YJR107C-AP0CT86 78 aa6.12□□□□□ -1.43
MSF1YPR047W BSC4P53841 131 aa6.12□□□□□ -1.43
MSF1YPR047W FYV5P25585 152 aa6.1□□□□□ -1.43
MSF1YPR047W HOT13P36078 116 aa6.09□□□□□ -1.43
MSF1YPR047W MPC3P53311 146 aa6.08□□□□□ -1.44
MSF1YPR047W YHR007C-AQ07074 71 aa6.08□□□□□ -1.44
MSF1YPR047W YHR139C-AO13536 103 aa6.08□□□□□ -1.44
MSF1YPR047W RPP2AP05319 106 aaKnown RBP6.08□□□□□ -1.44
MSF1YPR047W YMR230W-AQ3E7B5 62 aa6.06□□□□□ -1.44
MSF1YPR047W ATP18P81450 59 aa6.05□□□□□ -1.44
MSF1YPR047W YOR072WQ08486 104 aa6.05□□□□□ -1.44
MSF1YPR047W YNL184CP53876 108 aa6.04□□□□□ -1.44
MSF1YPR047W YBR027CP38220 110 aa6.03□□□□□ -1.44
MSF1YPR047W EMC6Q12431 108 aa6.03□□□□□ -1.44
MSF1YPR047W TSC3Q3E790 80 aa6.02□□□□□ -1.45
MSF1YPR047W YHL042WP38729 150 aa6.01□□□□□ -1.45
MSF1YPR047W SHH4Q06236 168 aa6.01□□□□□ -1.45
MSF1YPR047W RAD6P06104 172 aa6□□□□□ -1.45
MSF1YPR047W SFT1P43682 97 aa6□□□□□ -1.45
MSF1YPR047W RSM19P53733 91 aaPredicted RBP6□□□□□ -1.45
MSF1YPR047W YDR119W-AQ2V2P9 66 aa5.99□□□□□ -1.45
MSF1YPR047W YFR009W-AP0C5M9 85 aa5.99□□□□□ -1.45
MSF1YPR047W BET1P22804 142 aa5.99□□□□□ -1.45
MSF1YPR047W RPL36BO14455 100 aaKnown RBP5.98□□□□□ -1.45
MSF1YPR047W YHL018WP38744 120 aaPredicted RBP5.97□□□□□ -1.45
MSF1YPR047W YSY6P38374 65 aa5.96□□□□□ -1.46
MSF1YPR047W YAR1P46683 200 aa5.96□□□□□ -1.46
MSF1YPR047W COF1Q03048 143 aaKnown RBP5.96□□□□□ -1.46
MSF1YPR047W YGR039WP53225 103 aa5.95□□□□□ -1.46
MSF1YPR047W EDC1P53080 175 aaPredicted RBP5.93□□□□□ -1.46
MSF1YPR047W YPL038W-AQ3E7B4 63 aa5.93□□□□□ -1.46
MSF1YPR047W YHL005CP38752 130 aa5.92□□□□□ -1.46
MSF1YPR047W YLR285C-AQ3E771 56 aa5.92□□□□□ -1.46
MSF1YPR047W RPL37BP51402 88 aaKnown RBP5.91□□□□□ -1.46
MSF1YPR047W TDA2P40045 126 aa5.89□□□□□ -1.47
MSF1YPR047W ICS3P47034 131 aa5.89□□□□□ -1.47
MSF1YPR047W YOR304C-AO14468 76 aa5.88□□□□□ -1.47
MSF1YPR047W RPL38P49167 78 aaKnown RBP5.88□□□□□ -1.47
MSF1YPR047W COX23P38824 151 aa5.87□□□□□ -1.47
MSF1YPR047W YHR213W-BQ8TGK1 99 aa5.85□□□□□ -1.47
MSF1YPR047W RSM18P40033 138 aa5.84□□□□□ -1.47
MSF1YPR047W YKL183C-AQ3E765 70 aa5.84□□□□□ -1.47
MSF1YPR047W TOM6P33448 61 aa5.83□□□□□ -1.48
MSF1YPR047W YNL122CP53921 115 aaPredicted RBP5.83□□□□□ -1.48
MSF1YPR047W ATP20Q12233 115 aa5.83□□□□□ -1.48
MSF1YPR047W TDA8Q6B2U8 126 aa5.82□□□□□ -1.48
MSF1YPR047W COX7P10174 60 aa5.82□□□□□ -1.48
MSF1YPR047W YOL014WQ08110 124 aa5.81□□□□□ -1.48
MSF1YPR047W YJL133C-AQ3E7A3 74 aa5.8□□□□□ -1.48
MSF1YPR047W YPL080CQ02826 108 aa5.79□□□□□ -1.48
MSF1YPR047W YIR021W-AQ3E739 70 aa5.79□□□□□ -1.48
MSF1YPR047W YLR157W-DP0CE99 70 aa5.78□□□□□ -1.48
MSF1YPR047W YCR050CP25630 102 aa5.78□□□□□ -1.48
MSF1YPR047W ECM19Q06011 112 aa5.78□□□□□ -1.48
MSF1YPR047W YDR246W-AQ3E763 66 aa5.77□□□□□ -1.49
MSF1YPR047W YOR314WQ12506 109 aa5.75□□□□□ -1.49
MSF1YPR047W YOL097W-AQ3E7Y9 61 aa5.75□□□□□ -1.49
MSF1YPR047W YER187WP40102 141 aa5.74□□□□□ -1.49
MSF1YPR047W YEL045CP32616 141 aa5.74□□□□□ -1.49
MSF1YPR047W YLR162WQ06235 118 aa5.74□□□□□ -1.49
MSF1YPR047W MIC10Q96VH5 97 aa5.72□□□□□ -1.49
MSF1YPR047W YBR182C-AQ8TGU6 64 aa5.71□□□□□ -1.5
MSF1YPR047W AIM4P38305 123 aaPredicted RBP5.69□□□□□ -1.5
MSF1YPR047W NOP10Q6Q547 58 aaPredicted RBP5.69□□□□□ -1.5
MSF1YPR047W YDR182W-AQ3E796 67 aa5.66□□□□□ -1.5
MSF1YPR047W YCR043CP25361 127 aa5.65□□□□□ -1.5
MSF1YPR047W RPL36AP05745 100 aaPredicted RBP5.62□□□□□ -1.51
MSF1YPR047W YOL166W-AQ8TGJ1 51 aa5.62□□□□□ -1.51
MSF1YPR047W YAR064WP39563 99 aa5.58□□□□□ -1.52
MSF1YPR047W LIP1Q03579 150 aa5.58□□□□□ -1.52
MSF1YPR047W YOL013W-AP0C272 63 aaPredicted RBP5.56□□□□□ -1.52
MSF1YPR047W YIL102CP40488 101 aa5.55□□□□□ -1.52
MSF1YPR047W YLR361C-AQ3E795 98 aa5.52□□□□□ -1.53
MSF1YPR047W FYV12Q08559 129 aa5.51□□□□□ -1.53
MSF1YPR047W Q0017Q9ZZX8 53 aa5.48□□□□□ -1.53
MSF1YPR047W YPR153WQ06537 140 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms