RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C BET1P22804 142 aa4.92□□□□□ -1.62
LSP1YPL004C MPC3P53311 146 aa4.92□□□□□ -1.62
LSP1YPL004C YOR072WQ08486 104 aa4.92□□□□□ -1.62
LSP1YPL004C YKL069WP36088 180 aa4.91□□□□□ -1.62
LSP1YPL004C YIL102C-AQ2V2P5 75 aa4.91□□□□□ -1.62
LSP1YPL004C RPL36BO14455 100 aaKnown RBP4.9□□□□□ -1.63
LSP1YPL004C YJL197C-AP0C5P0 93 aa4.9□□□□□ -1.63
LSP1YPL004C KTI11Q3E840 82 aa4.9□□□□□ -1.63
LSP1YPL004C YMR230W-AQ3E7B5 62 aa4.88□□□□□ -1.63
LSP1YPL004C KSH1Q8TGJ3 72 aa4.88□□□□□ -1.63
LSP1YPL004C YPR170W-BP0C5R9 85 aa4.87□□□□□ -1.63
LSP1YPL004C OST2P46964 130 aa4.87□□□□□ -1.63
LSP1YPL004C YBR027CP38220 110 aa4.86□□□□□ -1.63
LSP1YPL004C YHR139C-AO13536 103 aa4.85□□□□□ -1.63
LSP1YPL004C HOT13P36078 116 aa4.84□□□□□ -1.63
LSP1YPL004C YNL198CP40166 100 aa4.84□□□□□ -1.63
LSP1YPL004C YJR107C-AP0CT86 78 aa4.83□□□□□ -1.64
LSP1YPL004C DSE2P38844 325 aa4.83□□□□□ -1.64
LSP1YPL004C YNL184CP53876 108 aa4.83□□□□□ -1.64
LSP1YPL004C RSM18P40033 138 aa4.82□□□□□ -1.64
LSP1YPL004C TDA8Q6B2U8 126 aa4.82□□□□□ -1.64
LSP1YPL004C LSO2Q3E772 92 aaKnown RBP4.81□□□□□ -1.64
LSP1YPL004C TSC3Q3E790 80 aa4.81□□□□□ -1.64
LSP1YPL004C YAR1P46683 200 aa4.8□□□□□ -1.64
LSP1YPL004C CMC4Q3E7A9 73 aa4.79□□□□□ -1.64
LSP1YPL004C YFR009W-AP0C5M9 85 aa4.77□□□□□ -1.65
LSP1YPL004C UIP3P39547 235 aa4.77□□□□□ -1.65
LSP1YPL004C ATP18P81450 59 aa4.77□□□□□ -1.65
LSP1YPL004C RSM19P53733 91 aaPredicted RBP4.75□□□□□ -1.65
LSP1YPL004C YHL018WP38744 120 aaPredicted RBP4.73□□□□□ -1.65
LSP1YPL004C YHR213W-BQ8TGK1 99 aa4.73□□□□□ -1.65
LSP1YPL004C YHL005CP38752 130 aa4.72□□□□□ -1.65
LSP1YPL004C YOL097W-AQ3E7Y9 61 aa4.72□□□□□ -1.65
LSP1YPL004C ICS3P47034 131 aa4.71□□□□□ -1.66
LSP1YPL004C YLR162WQ06235 118 aa4.71□□□□□ -1.66
LSP1YPL004C YAL063C-AQ3E791 96 aa4.71□□□□□ -1.66
LSP1YPL004C YLR157W-DP0CE99 70 aa4.7□□□□□ -1.66
LSP1YPL004C YDR381C-AQ3E6R5 114 aa4.7□□□□□ -1.66
LSP1YPL004C YJL133C-AQ3E7A3 74 aa4.7□□□□□ -1.66
LSP1YPL004C ECM19Q06011 112 aa4.69□□□□□ -1.66
LSP1YPL004C SHH4Q06236 168 aa4.69□□□□□ -1.66
LSP1YPL004C MIC10Q96VH5 97 aa4.69□□□□□ -1.66
LSP1YPL004C YEL045CP32616 141 aa4.67□□□□□ -1.66
LSP1YPL004C COX23P38824 151 aa4.66□□□□□ -1.66
LSP1YPL004C ISD11Q6Q560 94 aa4.66□□□□□ -1.66
LSP1YPL004C PBI2P0CT04 75 aaKnown RBP4.65□□□□□ -1.67
LSP1YPL004C RPA12P32529 125 aaKnown RBP4.64□□□□□ -1.67
LSP1YPL004C COX7P10174 60 aa4.63□□□□□ -1.67
LSP1YPL004C TMA7Q3E764 64 aaKnown RBP4.63□□□□□ -1.67
LSP1YPL004C YNL122CP53921 115 aaPredicted RBP4.62□□□□□ -1.67
LSP1YPL004C EDC1P53080 175 aaPredicted RBP4.61□□□□□ -1.67
LSP1YPL004C YOL014WQ08110 124 aa4.61□□□□□ -1.67
LSP1YPL004C YBR182C-AQ8TGU6 64 aa4.6□□□□□ -1.67
LSP1YPL004C YCR085WP25650 117 aa4.58□□□□□ -1.68
LSP1YPL004C TDA2P40045 126 aa4.58□□□□□ -1.68
LSP1YPL004C RPL38P49167 78 aaKnown RBP4.58□□□□□ -1.68
LSP1YPL004C YCR043CP25361 127 aa4.57□□□□□ -1.68
LSP1YPL004C RPL37BP51402 88 aaKnown RBP4.57□□□□□ -1.68
LSP1YPL004C COF1Q03048 143 aaKnown RBP4.56□□□□□ -1.68
LSP1YPL004C YCR050CP25630 102 aa4.55□□□□□ -1.68
LSP1YPL004C YHL042WP38729 150 aa4.55□□□□□ -1.68
LSP1YPL004C RAD6P06104 172 aa4.52□□□□□ -1.69
LSP1YPL004C SKI6P46948 246 aaPredicted RBP4.52□□□□□ -1.69
LSP1YPL004C ATP20Q12233 115 aa4.52□□□□□ -1.69
LSP1YPL004C YOR304C-AO14468 76 aa4.51□□□□□ -1.69
LSP1YPL004C ATX1P38636 73 aa4.51□□□□□ -1.69
LSP1YPL004C RPP2AP05319 106 aaKnown RBP4.5□□□□□ -1.69
LSP1YPL004C YHR073W-AP0C5N7 58 aa4.5□□□□□ -1.69
LSP1YPL004C RPL36AP05745 100 aaPredicted RBP4.49□□□□□ -1.69
LSP1YPL004C YAR064WP39563 99 aa4.47□□□□□ -1.69
LSP1YPL004C YDL012CQ12489 107 aa4.46□□□□□ -1.7
LSP1YPL004C INO4P13902 151 aa4.45□□□□□ -1.7
LSP1YPL004C YLR361C-AQ3E795 98 aa4.45□□□□□ -1.7
LSP1YPL004C EMC6Q12431 108 aa4.44□□□□□ -1.7
LSP1YPL004C YER187WP40102 141 aa4.43□□□□□ -1.7
LSP1YPL004C YGR164WP53291 111 aa4.42□□□□□ -1.7
LSP1YPL004C YLR285C-AQ3E771 56 aa4.42□□□□□ -1.7
LSP1YPL004C YSY6P38374 65 aa4.39□□□□□ -1.71
LSP1YPL004C YOR316C-AQ3E806 69 aa4.38□□□□□ -1.71
LSP1YPL004C YPL080CQ02826 108 aa4.37□□□□□ -1.71
LSP1YPL004C YPR153WQ06537 140 aa4.36□□□□□ -1.71
LSP1YPL004C YFL041W-AQ3E817 63 aa4.36□□□□□ -1.71
LSP1YPL004C FYV12Q08559 129 aa4.34□□□□□ -1.71
LSP1YPL004C YKL183C-AQ3E765 70 aa4.34□□□□□ -1.71
LSP1YPL004C Q0017Q9ZZX8 53 aa4.32□□□□□ -1.72
LSP1YPL004C SLO1Q3E784 85 aa4.31□□□□□ -1.72
LSP1YPL004C LIP1Q03579 150 aa4.3□□□□□ -1.72
LSP1YPL004C YJR128WP47162 119 aa4.29□□□□□ -1.72
LSP1YPL004C YOL013W-AP0C272 63 aaPredicted RBP4.28□□□□□ -1.72
LSP1YPL004C YGR039WP53225 103 aa4.28□□□□□ -1.72
LSP1YPL004C YFL065CP43539 102 aa4.26□□□□□ -1.73
LSP1YPL004C YJL144WP47009 104 aa4.26□□□□□ -1.73
LSP1YPL004C YPR203WQ08994 102 aa4.26□□□□□ -1.73
LSP1YPL004C YOR314WQ12506 109 aa4.25□□□□□ -1.73
LSP1YPL004C HHF1P02309 103 aaKnown RBP4.24□□□□□ -1.73
LSP1YPL004C NOP10Q6Q547 58 aaPredicted RBP4.22□□□□□ -1.73
LSP1YPL004C YGR146C-AQ8TGT9 53 aa4.19□□□□□ -1.74
LSP1YPL004C YLR255CO13574 117 aa4.18□□□□□ -1.74
LSP1YPL004C YIL102CP40488 101 aa4.18□□□□□ -1.74
LSP1YPL004C YJL009WP47078 108 aa4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms