RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C FUN14P18411 198 aa4.24□□□□□ -1.73
PUP1YOR157C YKL044WP36092 106 aa4.24□□□□□ -1.73
PUP1YOR157C SFT1P43682 97 aa4.24□□□□□ -1.73
PUP1YOR157C ZEO1Q08245 113 aa4.24□□□□□ -1.73
PUP1YOR157C MRPL44P19956 98 aa4.23□□□□□ -1.73
PUP1YOR157C YJL009WP47078 108 aa4.23□□□□□ -1.73
PUP1YOR157C OST2P46964 130 aa4.22□□□□□ -1.73
PUP1YOR157C GTT1P40582 234 aa4.2□□□□□ -1.74
PUP1YOR157C TDA8Q6B2U8 126 aa4.2□□□□□ -1.74
PUP1YOR157C YHR130CP38834 111 aa4.18□□□□□ -1.74
PUP1YOR157C DSE2P38844 325 aa4.18□□□□□ -1.74
PUP1YOR157C UIP3P39547 235 aa4.18□□□□□ -1.74
PUP1YOR157C RPS29BP41058 56 aaKnown RBP4.18□□□□□ -1.74
PUP1YOR157C SEC11P15367 167 aa4.17□□□□□ -1.74
PUP1YOR157C YAR1P46683 200 aa4.17□□□□□ -1.74
PUP1YOR157C COF1Q03048 143 aaKnown RBP4.14□□□□□ -1.75
PUP1YOR157C CNL1Q06333 122 aa4.14□□□□□ -1.75
PUP1YOR157C RSM19P53733 91 aaPredicted RBP4.12□□□□□ -1.75
PUP1YOR157C YER187WP40102 141 aa4.1□□□□□ -1.75
PUP1YOR157C YLR162WQ06235 118 aa4.1□□□□□ -1.75
PUP1YOR157C YER175W-AQ8TGU4 54 aa4.1□□□□□ -1.75
PUP1YOR157C YGL230CP53074 147 aa4.09□□□□□ -1.75
PUP1YOR157C MIC10Q96VH5 97 aa4.09□□□□□ -1.75
PUP1YOR157C MSL1P40567 111 aaPredicted RBP4.08□□□□□ -1.76
PUP1YOR157C SHH4Q06236 168 aa4.06□□□□□ -1.76
PUP1YOR157C COA6Q3E846 104 aa4.06□□□□□ -1.76
PUP1YOR157C HUR1P45820 110 aa4.05□□□□□ -1.76
PUP1YOR157C YLR361C-AQ3E795 98 aa4.05□□□□□ -1.76
PUP1YOR157C EDC1P53080 175 aaPredicted RBP4.04□□□□□ -1.76
PUP1YOR157C YHR213W-BQ8TGK1 99 aa4.04□□□□□ -1.76
PUP1YOR157C SEN15Q04675 128 aa4.03□□□□□ -1.76
PUP1YOR157C ECM19Q06011 112 aa4.03□□□□□ -1.76
PUP1YOR157C YJL133C-AQ3E7A3 74 aa4.02□□□□□ -1.77
PUP1YOR157C YIL134C-AQ45U18 67 aa4.02□□□□□ -1.77
PUP1YOR157C NHP2P32495 156 aaPredicted RBP4.01□□□□□ -1.77
PUP1YOR157C TSC3Q3E790 80 aa4.01□□□□□ -1.77
PUP1YOR157C CUE4Q04201 117 aaPredicted RBP4□□□□□ -1.77
PUP1YOR157C YHR073W-AP0C5N7 58 aa3.99□□□□□ -1.77
PUP1YOR157C YGL034CP53186 121 aa3.99□□□□□ -1.77
PUP1YOR157C ELC1Q03071 99 aa3.98□□□□□ -1.77
PUP1YOR157C YFR009W-AP0C5M9 85 aa3.96□□□□□ -1.78
PUP1YOR157C YPR153WQ06537 140 aa3.96□□□□□ -1.78
PUP1YOR157C SSS1P35179 80 aa3.95□□□□□ -1.78
PUP1YOR157C YJL144WP47009 104 aa3.95□□□□□ -1.78
PUP1YOR157C YDL012CQ12489 107 aa3.94□□□□□ -1.78
PUP1YOR157C YJR107C-AP0CT86 78 aa3.93□□□□□ -1.78
PUP1YOR157C ICS3P47034 131 aa3.93□□□□□ -1.78
PUP1YOR157C YGR164WP53291 111 aa3.93□□□□□ -1.78
PUP1YOR157C ATP18P81450 59 aa3.9□□□□□ -1.79
PUP1YOR157C YOR316C-AQ3E806 69 aa3.9□□□□□ -1.79
PUP1YOR157C YLR296WQ05898 108 aa3.89□□□□□ -1.79
PUP1YOR157C YER181CP40097 107 aa3.86□□□□□ -1.79
PUP1YOR157C YBR016WP38216 128 aa3.85□□□□□ -1.79
PUP1YOR157C LSM6Q06406 86 aaKnown RBP3.85□□□□□ -1.79
PUP1YOR157C NAT5Q08689 176 aa3.84□□□□□ -1.79
PUP1YOR157C COX23P38824 151 aa3.83□□□□□ -1.8
PUP1YOR157C YOL014WQ08110 124 aa3.83□□□□□ -1.8
PUP1YOR157C POP7P38291 140 aa3.81□□□□□ -1.8
PUP1YOR157C RPL36AP05745 100 aaPredicted RBP3.8□□□□□ -1.8
PUP1YOR157C PAI3P01094 68 aa3.79□□□□□ -1.8
PUP1YOR157C TIM11P81449 96 aaPredicted RBP3.79□□□□□ -1.8
PUP1YOR157C YIL002W-AQ3E7Z5 69 aa3.76□□□□□ -1.81
PUP1YOR157C YAR064WP39563 99 aa3.75□□□□□ -1.81
PUP1YOR157C SKI6P46948 246 aaPredicted RBP3.75□□□□□ -1.81
PUP1YOR157C YML108WQ03759 105 aa3.75□□□□□ -1.81
PUP1YOR157C LSO2Q3E772 92 aaKnown RBP3.75□□□□□ -1.81
PUP1YOR157C CGR1P53188 120 aa3.73□□□□□ -1.81
PUP1YOR157C YDR381C-AQ3E6R5 114 aa3.71□□□□□ -1.82
PUP1YOR157C RPL38P49167 78 aaKnown RBP3.7□□□□□ -1.82
PUP1YOR157C YLR363W-AQ3E747 85 aa3.7□□□□□ -1.82
PUP1YOR157C ISD11Q6Q560 94 aa3.69□□□□□ -1.82
PUP1YOR157C RPL37AP49166 88 aaKnown RBP3.68□□□□□ -1.82
PUP1YOR157C YML054C-AQ3E809 52 aa3.68□□□□□ -1.82
PUP1YOR157C YOR304C-AO14468 76 aa3.67□□□□□ -1.82
PUP1YOR157C TDA2P40045 126 aa3.66□□□□□ -1.82
PUP1YOR157C YHL042WP38729 150 aa3.63□□□□□ -1.83
PUP1YOR157C YLR255CO13574 117 aa3.61□□□□□ -1.83
PUP1YOR157C YCR050CP25630 102 aa3.59□□□□□ -1.83
PUP1YOR157C HHF1P02309 103 aaKnown RBP3.56□□□□□ -1.84
PUP1YOR157C YBL044WP38194 122 aa3.56□□□□□ -1.84
PUP1YOR157C YPL080CQ02826 108 aa3.56□□□□□ -1.84
PUP1YOR157C YBL008W-AQ3E821 79 aa3.55□□□□□ -1.84
PUP1YOR157C LIP1Q03579 150 aa3.53□□□□□ -1.84
PUP1YOR157C ATP20Q12233 115 aa3.52□□□□□ -1.85
PUP1YOR157C LSM8P47093 109 aaKnown RBP3.51□□□□□ -1.85
PUP1YOR157C RPS30AP0CX33 63 aaKnown RBP3.49□□□□□ -1.85
PUP1YOR157C RPS30BP0CX34 63 aaKnown RBP3.49□□□□□ -1.85
PUP1YOR157C RPA12P32529 125 aaKnown RBP3.47□□□□□ -1.85
PUP1YOR157C YIL102C-AQ2V2P5 75 aa3.47□□□□□ -1.85
PUP1YOR157C SAE3P89114 91 aa3.46□□□□□ -1.86
PUP1YOR157C COX8P04039 78 aa3.44□□□□□ -1.86
PUP1YOR157C PBI2P0CT04 75 aaKnown RBP3.44□□□□□ -1.86
PUP1YOR157C YDL085C-AQ3E7B7 68 aaKnown RBP3.44□□□□□ -1.86
PUP1YOR157C RAD6P06104 172 aa3.43□□□□□ -1.86
PUP1YOR157C RUB1Q03919 77 aa3.43□□□□□ -1.86
PUP1YOR157C YIL156W-BQ2V2P4 73 aa3.43□□□□□ -1.86
PUP1YOR157C YGR146C-AQ8TGT9 53 aa3.43□□□□□ -1.86
PUP1YOR157C YNL198CP40166 100 aa3.4□□□□□ -1.87
PUP1YOR157C YGR039WP53225 103 aa3.4□□□□□ -1.87
PUP1YOR157C GLC8P41818 229 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms