RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W DDR2P89113 61 aa2.44□□□□□ -2.02
ROD1YOR018W YNL042W-BQ3E7Z2 85 aa2.44□□□□□ -2.02
ROD1YOR018W YJR107C-AP0CT86 78 aa2.43□□□□□ -2.02
ROD1YOR018W YFR009W-AP0C5M9 85 aa2.42□□□□□ -2.02
ROD1YOR018W OST2P46964 130 aa2.42□□□□□ -2.02
ROD1YOR018W PBI2P0CT04 75 aaKnown RBP2.42□□□□□ -2.02
ROD1YOR018W INO4P13902 151 aa2.42□□□□□ -2.02
ROD1YOR018W BET1P22804 142 aa2.42□□□□□ -2.02
ROD1YOR018W YFL067WP43537 175 aa2.41□□□□□ -2.02
ROD1YOR018W LCL1Q02786 101 aa2.41□□□□□ -2.02
ROD1YOR018W RPL26AP05743 127 aaKnown RBP2.41□□□□□ -2.02
ROD1YOR018W YBR027CP38220 110 aa2.41□□□□□ -2.02
ROD1YOR018W RPL26BP53221 127 aaKnown RBP2.41□□□□□ -2.02
ROD1YOR018W SPT4P32914 102 aaPredicted RBP2.4□□□□□ -2.03
ROD1YOR018W YJR085CP47131 105 aaKnown RBP2.4□□□□□ -2.03
ROD1YOR018W YGL149WP53116 101 aa2.4□□□□□ -2.03
ROD1YOR018W YDR381C-AQ3E6R5 114 aa2.4□□□□□ -2.03
ROD1YOR018W RPL36BO14455 100 aaKnown RBP2.39□□□□□ -2.03
ROD1YOR018W RSM18P40033 138 aa2.39□□□□□ -2.03
ROD1YOR018W YOL014WQ08110 124 aa2.39□□□□□ -2.03
ROD1YOR018W YHR139C-AO13536 103 aa2.39□□□□□ -2.03
ROD1YOR018W ATP18P81450 59 aa2.39□□□□□ -2.03
ROD1YOR018W YOR072WQ08486 104 aa2.39□□□□□ -2.03
ROD1YOR018W KRE1P17260 313 aa2.38□□□□□ -2.03
ROD1YOR018W YOR268CQ08734 132 aa2.38□□□□□ -2.03
ROD1YOR018W ATX1P38636 73 aa2.38□□□□□ -2.03
ROD1YOR018W EDC2P40023 145 aaPredicted RBP2.38□□□□□ -2.03
ROD1YOR018W RPL38P49167 78 aaKnown RBP2.38□□□□□ -2.03
ROD1YOR018W RAD6P06104 172 aa2.37□□□□□ -2.03
ROD1YOR018W ICS3P47034 131 aa2.37□□□□□ -2.03
ROD1YOR018W RUB1Q03919 77 aa2.37□□□□□ -2.03
ROD1YOR018W YNL184CP53876 108 aa2.37□□□□□ -2.03
ROD1YOR018W YBL112CQ3E7Y4 105 aa2.37□□□□□ -2.03
ROD1YOR018W ISD11Q6Q560 94 aa2.37□□□□□ -2.03
ROD1YOR018W YHR213W-BQ8TGK1 99 aa2.37□□□□□ -2.03
ROD1YOR018W SLO1Q3E784 85 aa2.36□□□□□ -2.03
ROD1YOR018W YAL063C-AQ3E791 96 aa2.36□□□□□ -2.03
ROD1YOR018W YDR010CQ12426 110 aa2.36□□□□□ -2.03
ROD1YOR018W YJL197C-AP0C5P0 93 aa2.35□□□□□ -2.03
ROD1YOR018W YGR121W-AQ3E816 71 aa2.35□□□□□ -2.03
ROD1YOR018W YER039C-AP0CD97 72 aa2.35□□□□□ -2.03
ROD1YOR018W SKI6P46948 246 aaPredicted RBP2.35□□□□□ -2.03
ROD1YOR018W YJL133C-AQ3E7A3 74 aa2.35□□□□□ -2.03
ROD1YOR018W COF1Q03048 143 aaKnown RBP2.34□□□□□ -2.03
ROD1YOR018W TDA8Q6B2U8 126 aa2.34□□□□□ -2.03
ROD1YOR018W YAR1P46683 200 aa2.34□□□□□ -2.04
ROD1YOR018W TSC3Q3E790 80 aa2.34□□□□□ -2.04
ROD1YOR018W YFL065CP43539 102 aa2.33□□□□□ -2.04
ROD1YOR018W SHH4Q06236 168 aa2.33□□□□□ -2.04
ROD1YOR018W YPR203WQ08994 102 aa2.33□□□□□ -2.04
ROD1YOR018W YEL045CP32616 141 aa2.33□□□□□ -2.04
ROD1YOR018W RSM19P53733 91 aaPredicted RBP2.33□□□□□ -2.04
ROD1YOR018W SPG1P50088 95 aa2.32□□□□□ -2.04
ROD1YOR018W ECM19Q06011 112 aa2.32□□□□□ -2.04
ROD1YOR018W MIC10Q96VH5 97 aa2.32□□□□□ -2.04
ROD1YOR018W SFT1P43682 97 aa2.32□□□□□ -2.04
ROD1YOR018W YLR162WQ06235 118 aa2.32□□□□□ -2.04
ROD1YOR018W YLR285C-AQ3E771 56 aa2.31□□□□□ -2.04
ROD1YOR018W YCR085WP25650 117 aa2.3□□□□□ -2.04
ROD1YOR018W COX23P38824 151 aa2.3□□□□□ -2.04
ROD1YOR018W TDA2P40045 126 aa2.3□□□□□ -2.04
ROD1YOR018W YPL080CQ02826 108 aa2.29□□□□□ -2.04
ROD1YOR018W EMC6Q12431 108 aa2.29□□□□□ -2.04
ROD1YOR018W YFL041W-AQ3E817 63 aa2.28□□□□□ -2.04
ROD1YOR018W KTI11Q3E840 82 aa2.28□□□□□ -2.04
ROD1YOR018W HHF1P02309 103 aaKnown RBP2.27□□□□□ -2.05
ROD1YOR018W ATP20Q12233 115 aa2.27□□□□□ -2.05
ROD1YOR018W YHL042WP38729 150 aa2.27□□□□□ -2.05
ROD1YOR018W YHL018WP38744 120 aaPredicted RBP2.26□□□□□ -2.05
ROD1YOR018W YDL012CQ12489 107 aa2.26□□□□□ -2.05
ROD1YOR018W YDR119W-AQ2V2P9 66 aa2.25□□□□□ -2.05
ROD1YOR018W YIL002W-AQ3E7Z5 69 aa2.25□□□□□ -2.05
ROD1YOR018W KSH1Q8TGJ3 72 aa2.25□□□□□ -2.05
ROD1YOR018W YGR039WP53225 103 aa2.24□□□□□ -2.05
ROD1YOR018W YLR361C-AQ3E795 98 aa2.24□□□□□ -2.05
ROD1YOR018W YAR064WP39563 99 aa2.24□□□□□ -2.05
ROD1YOR018W YLR157W-DP0CE99 70 aa2.23□□□□□ -2.05
ROD1YOR018W YOL097W-AQ3E7Y9 61 aa2.23□□□□□ -2.05
ROD1YOR018W NOP10Q6Q547 58 aaPredicted RBP2.23□□□□□ -2.05
ROD1YOR018W YSY6P38374 65 aa2.23□□□□□ -2.05
ROD1YOR018W YDR246W-AQ3E763 66 aa2.23□□□□□ -2.05
ROD1YOR018W YCR050CP25630 102 aa2.22□□□□□ -2.05
ROD1YOR018W YHL005CP38752 130 aa2.22□□□□□ -2.05
ROD1YOR018W RPL36AP05745 100 aaPredicted RBP2.21□□□□□ -2.06
ROD1YOR018W YIL102CP40488 101 aa2.19□□□□□ -2.06
ROD1YOR018W YJL144WP47009 104 aa2.19□□□□□ -2.06
ROD1YOR018W YER187WP40102 141 aa2.18□□□□□ -2.06
ROD1YOR018W LIP1Q03579 150 aa2.18□□□□□ -2.06
ROD1YOR018W YPR153WQ06537 140 aa2.18□□□□□ -2.06
ROD1YOR018W YPL038W-AQ3E7B4 63 aa2.18□□□□□ -2.06
ROD1YOR018W YJR128WP47162 119 aa2.18□□□□□ -2.06
ROD1YOR018W YOL013W-AP0C272 63 aaPredicted RBP2.17□□□□□ -2.06
ROD1YOR018W YOL166W-AQ8TGJ1 51 aa2.17□□□□□ -2.06
ROD1YOR018W YKL183C-AQ3E765 70 aa2.17□□□□□ -2.06
ROD1YOR018W YOR316C-AQ3E806 69 aa2.17□□□□□ -2.06
ROD1YOR018W YOR304C-AO14468 76 aa2.16□□□□□ -2.06
ROD1YOR018W YOR314WQ12506 109 aa2.16□□□□□ -2.06
ROD1YOR018W YAL067W-AQ8TGK6 75 aa2.15□□□□□ -2.07
ROD1YOR018W YHR073W-AP0C5N7 58 aa2.14□□□□□ -2.07
ROD1YOR018W YNL122CP53921 115 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 133.6 ms