RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C RRT15Q3E811 62 aa6.85□□□□□ -1.31
SPT20YOL148C YGR121W-AQ3E816 71 aa6.84□□□□□ -1.31
SPT20YOL148C FMP27Q06179 2628 aa6.83□□□□□ -1.32
SPT20YOL148C SPO24Q3E752 67 aa6.83□□□□□ -1.32
SPT20YOL148C YGR240C-AQ3E786 66 aa6.83□□□□□ -1.32
SPT20YOL148C COX23P38824 151 aa6.82□□□□□ -1.32
SPT20YOL148C YNL162W-AQ3E7A8 72 aa6.81□□□□□ -1.32
SPT20YOL148C FYV5P25585 152 aa6.8□□□□□ -1.32
SPT20YOL148C SPT4P32914 102 aaPredicted RBP6.8□□□□□ -1.32
SPT20YOL148C MIC10Q96VH5 97 aa6.8□□□□□ -1.32
SPT20YOL148C EDC2P40023 145 aaPredicted RBP6.8□□□□□ -1.32
SPT20YOL148C YOL014WQ08110 124 aa6.8□□□□□ -1.32
SPT20YOL148C YBL039W-BP0C268 59 aa6.79□□□□□ -1.32
SPT20YOL148C RPS30AP0CX33 63 aaKnown RBP6.79□□□□□ -1.32
SPT20YOL148C RPS30BP0CX34 63 aaKnown RBP6.79□□□□□ -1.32
SPT20YOL148C YKL065W-AQ2V2P2 73 aa6.79□□□□□ -1.32
SPT20YOL148C AQY2P0CD90 149 aa6.78□□□□□ -1.32
SPT20YOL148C DIF1O13577 133 aa6.78□□□□□ -1.32
SPT20YOL148C RPC10P40422 70 aa6.78□□□□□ -1.32
SPT20YOL148C YHR213W-BQ8TGK1 99 aa6.77□□□□□ -1.33
SPT20YOL148C YDR274CP87283 123 aa6.76□□□□□ -1.33
SPT20YOL148C YBR230W-AQ3E762 66 aa6.76□□□□□ -1.33
SPT20YOL148C YJL127C-BQ3E828 52 aa6.76□□□□□ -1.33
SPT20YOL148C YGR035W-AQ45U48 73 aa6.76□□□□□ -1.33
SPT20YOL148C URA2P07259 2214 aaKnown RBP6.75□□□□□ -1.33
SPT20YOL148C YIL102CP40488 101 aa6.75□□□□□ -1.33
SPT20YOL148C YPL278CQ08990 100 aa6.75□□□□□ -1.33
SPT20YOL148C YPR010C-AA5Z2X5 72 aa6.74□□□□□ -1.33
SPT20YOL148C RDS3Q06835 107 aaPredicted RBP6.74□□□□□ -1.33
SPT20YOL148C SPC1P46965 94 aa6.73□□□□□ -1.33
SPT20YOL148C LIP1Q03579 150 aa6.73□□□□□ -1.33
SPT20YOL148C YMR122CQ03879 124 aa6.73□□□□□ -1.33
SPT20YOL148C YJL133C-AQ3E7A3 74 aa6.73□□□□□ -1.33
SPT20YOL148C HHF1P02309 103 aaKnown RBP6.72□□□□□ -1.33
SPT20YOL148C YCR001WP25347 104 aa6.72□□□□□ -1.33
SPT20YOL148C YCR041WP37265 110 aa6.72□□□□□ -1.33
SPT20YOL148C YAL064WP39711 94 aa6.71□□□□□ -1.34
SPT20YOL148C OST5Q92316 86 aa6.71□□□□□ -1.34
SPT20YOL148C YAR023CD6VPM8 179 aa6.69□□□□□ -1.34
SPT20YOL148C HOT13P36078 116 aa6.69□□□□□ -1.34
SPT20YOL148C IRA1P18963 3092 aa6.69□□□□□ -1.34
SPT20YOL148C PEX22P39718 180 aa6.69□□□□□ -1.34
SPT20YOL148C YER188C-AP0C0V2 99 aa6.68□□□□□ -1.34
SPT20YOL148C YBL081WP38180 368 aaKnown RBP6.68□□□□□ -1.34
SPT20YOL148C MMS2P53152 137 aa6.67□□□□□ -1.34
SPT20YOL148C YHR212W-AP0CX91 67 aa6.66□□□□□ -1.34
SPT20YOL148C IGD1P43598 195 aa6.66□□□□□ -1.34
SPT20YOL148C YNL042W-BQ3E7Z2 85 aa6.66□□□□□ -1.34
SPT20YOL148C RPB9P27999 122 aa6.65□□□□□ -1.34
SPT20YOL148C YLR307C-AQ3E825 87 aa6.65□□□□□ -1.34
SPT20YOL148C TRA1P38811 3744 aa6.65□□□□□ -1.35
SPT20YOL148C YBR144CP34215 104 aa6.64□□□□□ -1.35
SPT20YOL148C ECM19Q06011 112 aa6.64□□□□□ -1.35
SPT20YOL148C RPL33AP05744 107 aaKnown RBP6.63□□□□□ -1.35
SPT20YOL148C YOL013W-AP0C272 63 aaPredicted RBP6.63□□□□□ -1.35
SPT20YOL148C RPL33BP41056 107 aaKnown RBP6.63□□□□□ -1.35
SPT20YOL148C YPR153WQ06537 140 aa6.63□□□□□ -1.35
SPT20YOL148C YPR117WQ06116 2489 aa6.63□□□□□ -1.35
SPT20YOL148C Q0297Q9ZZV8 51 aa6.62□□□□□ -1.35
SPT20YOL148C HUB1Q6Q546 73 aa6.61□□□□□ -1.35
SPT20YOL148C YER145C-AA0A023PYF4 145 aa6.6□□□□□ -1.35
SPT20YOL148C YEL045CP32616 141 aa6.6□□□□□ -1.35
SPT20YOL148C Q0032Q9ZZX7 96 aa6.6□□□□□ -1.35
SPT20YOL148C SGF11Q03067 99 aa6.56□□□□□ -1.36
SPT20YOL148C SDH6Q3E785 79 aa6.56□□□□□ -1.36
SPT20YOL148C YDR115WQ04598 105 aa6.55□□□□□ -1.36
SPT20YOL148C YLR157W-DP0CE99 70 aa6.53□□□□□ -1.36
SPT20YOL148C YHR007C-AQ07074 71 aa6.53□□□□□ -1.36
SPT20YOL148C YOR376W-AQ3E805 51 aa6.53□□□□□ -1.36
SPT20YOL148C BSC4P53841 131 aa6.52□□□□□ -1.37
SPT20YOL148C YOR072WQ08486 104 aa6.52□□□□□ -1.37
SPT20YOL148C YCR095W-AQ3E787 52 aa6.52□□□□□ -1.37
SPT20YOL148C YAR064WP39563 99 aa6.51□□□□□ -1.37
SPT20YOL148C DDR2P89113 61 aa6.51□□□□□ -1.37
SPT20YOL148C YDR010CQ12426 110 aa6.51□□□□□ -1.37
SPT20YOL148C YMR001C-AQ8TGS9 76 aa6.51□□□□□ -1.37
SPT20YOL148C YHR125WP38831 101 aa6.5□□□□□ -1.37
SPT20YOL148C YML100W-AQ8TGT0 57 aa6.49□□□□□ -1.37
SPT20YOL148C SNA2P56508 79 aa6.48□□□□□ -1.37
SPT20YOL148C YGL041C-BQ3E750 60 aa6.48□□□□□ -1.37
SPT20YOL148C YGL034CP53186 121 aa6.47□□□□□ -1.37
SPT20YOL148C RTC6O14464 93 aa6.45□□□□□ -1.38
SPT20YOL148C AUA1P32450 94 aa6.45□□□□□ -1.38
SPT20YOL148C YLL066W-BQ8TGJ7 56 aa6.44□□□□□ -1.38
SPT20YOL148C YBR056W-AI2HB52 66 aa6.43□□□□□ -1.38
SPT20YOL148C GCN1P33892 2672 aaKnown RBP6.43□□□□□ -1.38
SPT20YOL148C GIS2P53849 153 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SPT20YOL148C YGL193CP53097 103 aa6.41□□□□□ -1.38
SPT20YOL148C YBR027CP38220 110 aa6.39□□□□□ -1.39
SPT20YOL148C YJL197C-AP0C5P0 93 aa6.38□□□□□ -1.39
SPT20YOL148C YCR043CP25361 127 aa6.38□□□□□ -1.39
SPT20YOL148C YIL156W-BQ2V2P4 73 aa6.38□□□□□ -1.39
SPT20YOL148C SPG1P50088 95 aa6.35□□□□□ -1.39
SPT20YOL148C ATP17Q06405 101 aa6.34□□□□□ -1.4
SPT20YOL148C YFR032C-BQ8TGU2 87 aa6.32□□□□□ -1.4
SPT20YOL148C YMR230W-AQ3E7B5 62 aa6.31□□□□□ -1.4
SPT20YOL148C YGL149WP53116 101 aa6.28□□□□□ -1.4
SPT20YOL148C YDL012CQ12489 107 aa6.27□□□□□ -1.41
SPT20YOL148C PRP8P33334 2413 aaKnown RBP6.26□□□□□ -1.41
SPT20YOL148C TOR2P32600 2474 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms