RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C YJL127C-BQ3E828 52 aa1.74□□□□□ -2.13
ATG3YNR007C RPL28P02406 149 aaKnown RBP1.73□□□□□ -2.13
ATG3YNR007C SEC11P15367 167 aa1.73□□□□□ -2.13
ATG3YNR007C YEL067CP39978 195 aa1.73□□□□□ -2.13
ATG3YNR007C CWC27Q02770 301 aa1.73□□□□□ -2.13
ATG3YNR007C FYV7Q12247 151 aa1.73□□□□□ -2.13
ATG3YNR007C YKL183C-AQ3E765 70 aa1.73□□□□□ -2.13
ATG3YNR007C YHR139C-AO13536 103 aa1.72□□□□□ -2.13
ATG3YNR007C BET1P22804 142 aa1.72□□□□□ -2.13
ATG3YNR007C SSS1P35179 80 aa1.72□□□□□ -2.13
ATG3YNR007C IRC21Q04772 201 aa1.72□□□□□ -2.13
ATG3YNR007C YOR072WQ08486 104 aa1.72□□□□□ -2.13
ATG3YNR007C TSC3Q3E790 80 aa1.72□□□□□ -2.13
ATG3YNR007C RPL36BO14455 100 aaKnown RBP1.71□□□□□ -2.14
ATG3YNR007C MRPL44P19956 98 aa1.71□□□□□ -2.14
ATG3YNR007C MSL1P40567 111 aaPredicted RBP1.71□□□□□ -2.14
ATG3YNR007C MRPS12P53732 153 aa1.71□□□□□ -2.14
ATG3YNR007C YBR230W-AQ3E762 66 aa1.71□□□□□ -2.14
ATG3YNR007C YLR157W-DP0CE99 70 aa1.7□□□□□ -2.14
ATG3YNR007C POP7P38291 140 aa1.7□□□□□ -2.14
ATG3YNR007C YHL005CP38752 130 aa1.7□□□□□ -2.14
ATG3YNR007C YGL230CP53074 147 aa1.7□□□□□ -2.14
ATG3YNR007C BSC4P53841 131 aa1.7□□□□□ -2.14
ATG3YNR007C YPR170W-BP0C5R9 85 aa1.69□□□□□ -2.14
ATG3YNR007C ELC1Q03071 99 aa1.69□□□□□ -2.14
ATG3YNR007C YER181CP40097 107 aa1.68□□□□□ -2.14
ATG3YNR007C YHR007C-AQ07074 71 aa1.68□□□□□ -2.14
ATG3YNR007C NAT5Q08689 176 aa1.68□□□□□ -2.14
ATG3YNR007C YDL157CQ12082 118 aa1.68□□□□□ -2.14
ATG3YNR007C YOL097W-AQ3E7Y9 61 aa1.68□□□□□ -2.14
ATG3YNR007C YIL134C-AQ45U18 67 aa1.68□□□□□ -2.14
ATG3YNR007C GLC8P41818 229 aa1.67□□□□□ -2.14
ATG3YNR007C HUR1P45820 110 aa1.67□□□□□ -2.14
ATG3YNR007C YOR304C-AO14468 76 aa1.66□□□□□ -2.14
ATG3YNR007C PAI3P01094 68 aa1.66□□□□□ -2.14
ATG3YNR007C YDL022C-AP0C5L6 82 aa1.66□□□□□ -2.14
ATG3YNR007C FUN14P18411 198 aa1.66□□□□□ -2.14
ATG3YNR007C YNR077CP53758 84 aa1.66□□□□□ -2.14
ATG3YNR007C YNL184CP53876 108 aa1.66□□□□□ -2.14
ATG3YNR007C YNL122CP53921 115 aaPredicted RBP1.66□□□□□ -2.14
ATG3YNR007C YLR363W-AQ3E747 85 aa1.66□□□□□ -2.14
ATG3YNR007C YDL085C-AQ3E7B7 68 aaKnown RBP1.66□□□□□ -2.14
ATG3YNR007C YBR027CP38220 110 aa1.65□□□□□ -2.15
ATG3YNR007C DSE2P38844 325 aa1.65□□□□□ -2.15
ATG3YNR007C LSM6Q06406 86 aaKnown RBP1.65□□□□□ -2.15
ATG3YNR007C YHR086W-AQ3E746 53 aa1.65□□□□□ -2.15
ATG3YNR007C TDA8Q6B2U8 126 aa1.65□□□□□ -2.15
ATG3YNR007C Q0017Q9ZZX8 53 aa1.65□□□□□ -2.15
ATG3YNR007C LSM8P47093 109 aaKnown RBP1.64□□□□□ -2.15
ATG3YNR007C RSM19P53733 91 aaPredicted RBP1.64□□□□□ -2.15
ATG3YNR007C SAE3P89114 91 aa1.64□□□□□ -2.15
ATG3YNR007C SHH4Q06236 168 aa1.63□□□□□ -2.15
ATG3YNR007C FYV12Q08559 129 aa1.63□□□□□ -2.15
ATG3YNR007C YJR107C-AP0CT86 78 aa1.62□□□□□ -2.15
ATG3YNR007C RSM18P40033 138 aa1.62□□□□□ -2.15
ATG3YNR007C RPL37BP51402 88 aaKnown RBP1.62□□□□□ -2.15
ATG3YNR007C MPC3P53311 146 aa1.62□□□□□ -2.15
ATG3YNR007C YLR296WQ05898 108 aa1.62□□□□□ -2.15
ATG3YNR007C COF1Q03048 143 aaKnown RBP1.61□□□□□ -2.15
ATG3YNR007C TDA2P40045 126 aa1.6□□□□□ -2.15
ATG3YNR007C SEN15Q04675 128 aa1.6□□□□□ -2.15
ATG3YNR007C YLR162WQ06235 118 aa1.6□□□□□ -2.15
ATG3YNR007C YOR034C-AQ3E735 80 aa1.6□□□□□ -2.15
ATG3YNR007C YHR213W-BQ8TGK1 99 aa1.6□□□□□ -2.15
ATG3YNR007C RAD6P06104 172 aa1.59□□□□□ -2.15
ATG3YNR007C ATP18P81450 59 aa1.59□□□□□ -2.15
ATG3YNR007C YCR050CP25630 102 aa1.58□□□□□ -2.16
ATG3YNR007C YHL042WP38729 150 aa1.58□□□□□ -2.16
ATG3YNR007C COX23P38824 151 aa1.58□□□□□ -2.16
ATG3YNR007C YIL102C-AQ2V2P5 75 aa1.58□□□□□ -2.16
ATG3YNR007C YJL133C-AQ3E7A3 74 aa1.58□□□□□ -2.16
ATG3YNR007C MIC10Q96VH5 97 aa1.58□□□□□ -2.16
ATG3YNR007C YHR073W-AP0C5N7 58 aa1.57□□□□□ -2.16
ATG3YNR007C ICS3P47034 131 aa1.57□□□□□ -2.16
ATG3YNR007C YFR032C-BQ8TGU2 87 aa1.57□□□□□ -2.16
ATG3YNR007C YFR009W-AP0C5M9 85 aa1.56□□□□□ -2.16
ATG3YNR007C YCR085WP25650 117 aa1.56□□□□□ -2.16
ATG3YNR007C YER187WP40102 141 aa1.56□□□□□ -2.16
ATG3YNR007C RPL36AP05745 100 aaPredicted RBP1.55□□□□□ -2.16
ATG3YNR007C SKI6P46948 246 aaPredicted RBP1.55□□□□□ -2.16
ATG3YNR007C YGR164WP53291 111 aa1.54□□□□□ -2.16
ATG3YNR007C RPL38P49167 78 aaKnown RBP1.53□□□□□ -2.16
ATG3YNR007C YML054C-AQ3E809 52 aa1.53□□□□□ -2.16
ATG3YNR007C PBI2P0CT04 75 aaKnown RBP1.52□□□□□ -2.17
ATG3YNR007C YAR064WP39563 99 aa1.52□□□□□ -2.17
ATG3YNR007C ATP20Q12233 115 aa1.52□□□□□ -2.17
ATG3YNR007C YDR381C-AQ3E6R5 114 aa1.52□□□□□ -2.17
ATG3YNR007C YLR361C-AQ3E795 98 aa1.52□□□□□ -2.17
ATG3YNR007C YLR255CO13574 117 aa1.51□□□□□ -2.17
ATG3YNR007C YJR128WP47162 119 aa1.51□□□□□ -2.17
ATG3YNR007C YDR210WQ03482 75 aa1.51□□□□□ -2.17
ATG3YNR007C LIP1Q03579 150 aa1.51□□□□□ -2.17
ATG3YNR007C YFL041W-AQ3E817 63 aa1.51□□□□□ -2.17
ATG3YNR007C YPR153WQ06537 140 aa1.5□□□□□ -2.17
ATG3YNR007C RPS29BP41058 56 aaKnown RBP1.49□□□□□ -2.17
ATG3YNR007C YOR316C-AQ3E806 69 aa1.49□□□□□ -2.17
ATG3YNR007C RPS29AP41057 56 aaKnown RBP1.48□□□□□ -2.17
ATG3YNR007C YJL009WP47078 108 aa1.48□□□□□ -2.17
ATG3YNR007C EDC1P53080 175 aaPredicted RBP1.48□□□□□ -2.17
ATG3YNR007C RPA12P32529 125 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 101.2 ms