RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeastyeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA49YNL248C YJL127C-BQ3E828 52 aa3.62□□□□□ -1.83
RPA49YNL248C STF1P01098 86 aa3.61□□□□□ -1.83
RPA49YNL248C BET1P22804 142 aa3.61□□□□□ -1.83
RPA49YNL248C RPL38P49167 78 aaKnown RBP3.61□□□□□ -1.83
RPA49YNL248C YBR230W-AQ3E762 66 aa3.61□□□□□ -1.83
RPA49YNL248C TDA2P40045 126 aa3.6□□□□□ -1.83
RPA49YNL248C SFT1P43682 97 aa3.6□□□□□ -1.83
RPA49YNL248C YDR029WQ12111 104 aa3.6□□□□□ -1.83
RPA49YNL248C ECM12O13529 151 aa3.59□□□□□ -1.83
RPA49YNL248C YFR009W-AP0C5M9 85 aa3.59□□□□□ -1.83
RPA49YNL248C RSM19P53733 91 aaPredicted RBP3.59□□□□□ -1.83
RPA49YNL248C YLR285C-AQ3E771 56 aa3.59□□□□□ -1.83
RPA49YNL248C YNL042W-BQ3E7Z2 85 aa3.59□□□□□ -1.83
RPA49YNL248C YOR304C-AO14468 76 aa3.58□□□□□ -1.84
RPA49YNL248C YSY6P38374 65 aa3.58□□□□□ -1.84
RPA49YNL248C EDC1P53080 175 aaPredicted RBP3.58□□□□□ -1.84
RPA49YNL248C YBL112CQ3E7Y4 105 aa3.58□□□□□ -1.84
RPA49YNL248C PEX22P39718 180 aa3.57□□□□□ -1.84
RPA49YNL248C YLR307C-AQ3E825 87 aa3.57□□□□□ -1.84
RPA49YNL248C DDR2P89113 61 aa3.56□□□□□ -1.84
RPA49YNL248C SHH4Q06236 168 aa3.56□□□□□ -1.84
RPA49YNL248C YDR119W-AQ2V2P9 66 aa3.56□□□□□ -1.84
RPA49YNL248C UTP20P35194 2493 aaKnown RBP3.56□□□□□ -1.84
RPA49YNL248C YDR034C-AP0C289 58 aa3.55□□□□□ -1.84
RPA49YNL248C YLR156WP0CE96 114 aa3.55□□□□□ -1.84
RPA49YNL248C YLR159WP0CE97 114 aa3.55□□□□□ -1.84
RPA49YNL248C YLR161WP0CE98 114 aa3.55□□□□□ -1.84
RPA49YNL248C SPT4P32914 102 aaPredicted RBP3.55□□□□□ -1.84
RPA49YNL248C YHL018WP38744 120 aaPredicted RBP3.55□□□□□ -1.84
RPA49YNL248C ICS3P47034 131 aa3.55□□□□□ -1.84
RPA49YNL248C YER039C-AP0CD97 72 aa3.54□□□□□ -1.84
RPA49YNL248C RSM18P40033 138 aa3.54□□□□□ -1.84
RPA49YNL248C GAT4P40569 121 aa3.54□□□□□ -1.84
RPA49YNL248C BSC4P53841 131 aa3.54□□□□□ -1.84
RPA49YNL248C YHR007C-AQ07074 71 aa3.54□□□□□ -1.84
RPA49YNL248C ATP20Q12233 115 aa3.54□□□□□ -1.84
RPA49YNL248C YHR213W-BQ8TGK1 99 aa3.54□□□□□ -1.84
RPA49YNL248C RPL36BO14455 100 aaKnown RBP3.53□□□□□ -1.84
RPA49YNL248C EDC2P40023 145 aaPredicted RBP3.53□□□□□ -1.84
RPA49YNL248C YGL193CP53097 103 aa3.53□□□□□ -1.84
RPA49YNL248C YPL080CQ02826 108 aa3.53□□□□□ -1.84
RPA49YNL248C YPR195CQ06594 109 aa3.53□□□□□ -1.84
RPA49YNL248C YPL038W-AQ3E7B4 63 aa3.53□□□□□ -1.84
RPA49YNL248C YOR072WQ08486 104 aa3.52□□□□□ -1.85
RPA49YNL248C YKL183C-AQ3E765 70 aa3.52□□□□□ -1.85
RPA49YNL248C COX23P38824 151 aa3.51□□□□□ -1.85
RPA49YNL248C YJL133C-AQ3E7A3 74 aa3.51□□□□□ -1.85
RPA49YNL248C TOM6P33448 61 aa3.49□□□□□ -1.85
RPA49YNL248C GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
RPA49YNL248C YOL014WQ08110 124 aa3.48□□□□□ -1.85
RPA49YNL248C YER187WP40102 141 aa3.47□□□□□ -1.85
RPA49YNL248C YOR314WQ12506 109 aa3.47□□□□□ -1.85
RPA49YNL248C YCR050CP25630 102 aa3.46□□□□□ -1.86
RPA49YNL248C HOT13P36078 116 aa3.46□□□□□ -1.86
RPA49YNL248C AIM4P38305 123 aaPredicted RBP3.46□□□□□ -1.86
RPA49YNL248C ECM19Q06011 112 aa3.46□□□□□ -1.86
RPA49YNL248C TDA8Q6B2U8 126 aa3.46□□□□□ -1.86
RPA49YNL248C YLR162WQ06235 118 aa3.45□□□□□ -1.86
RPA49YNL248C YIR021W-AQ3E739 70 aa3.45□□□□□ -1.86
RPA49YNL248C YGR121W-AQ3E816 71 aa3.45□□□□□ -1.86
RPA49YNL248C MIC10Q96VH5 97 aa3.45□□□□□ -1.86
RPA49YNL248C YEL045CP32616 141 aa3.43□□□□□ -1.86
RPA49YNL248C YIL102CP40488 101 aa3.43□□□□□ -1.86
RPA49YNL248C LCL2Q08045 131 aa3.43□□□□□ -1.86
RPA49YNL248C YLR361C-AQ3E795 98 aa3.43□□□□□ -1.86
RPA49YNL248C YMR230W-AQ3E7B5 62 aa3.43□□□□□ -1.86
RPA49YNL248C NOP10Q6Q547 58 aaPredicted RBP3.43□□□□□ -1.86
RPA49YNL248C SPG1P50088 95 aa3.42□□□□□ -1.86
RPA49YNL248C LCL1Q02786 101 aa3.42□□□□□ -1.86
RPA49YNL248C YBR027CP38220 110 aa3.4□□□□□ -1.87
RPA49YNL248C MMS2P53152 137 aa3.4□□□□□ -1.87
RPA49YNL248C YDR246W-AQ3E763 66 aa3.4□□□□□ -1.87
RPA49YNL248C YLR157W-DP0CE99 70 aa3.39□□□□□ -1.87
RPA49YNL248C YCR043CP25361 127 aa3.38□□□□□ -1.87
RPA49YNL248C YAR064WP39563 99 aa3.38□□□□□ -1.87
RPA49YNL248C YJR085CP47131 105 aaKnown RBP3.38□□□□□ -1.87
RPA49YNL248C LIP1Q03579 150 aa3.38□□□□□ -1.87
RPA49YNL248C RPL36AP05745 100 aaPredicted RBP3.37□□□□□ -1.87
RPA49YNL248C YDR182W-AQ3E796 67 aa3.37□□□□□ -1.87
RPA49YNL248C YJL197C-AP0C5P0 93 aa3.36□□□□□ -1.87
RPA49YNL248C YGL149WP53116 101 aa3.36□□□□□ -1.87
RPA49YNL248C YOR268CQ08734 132 aa3.36□□□□□ -1.87
RPA49YNL248C YOL097W-AQ3E7Y9 61 aa3.36□□□□□ -1.87
RPA49YNL248C YOL013W-AP0C272 63 aaPredicted RBP3.35□□□□□ -1.87
RPA49YNL248C DYN1P36022 4092 aa3.34□□□□□ -1.87
RPA49YNL248C YOL166W-AQ8TGJ1 51 aa3.34□□□□□ -1.87
RPA49YNL248C YBR121C-AP0C5L4 52 aa3.33□□□□□ -1.88
RPA49YNL248C YHL005CP38752 130 aa3.33□□□□□ -1.88
RPA49YNL248C RPS30AP0CX33 63 aaKnown RBP3.31□□□□□ -1.88
RPA49YNL248C RPS30BP0CX34 63 aaKnown RBP3.31□□□□□ -1.88
RPA49YNL248C DDR48P18899 430 aaKnown RBP3.31□□□□□ -1.88
RPA49YNL248C YPR153WQ06537 140 aa3.31□□□□□ -1.88
RPA49YNL248C KTI11Q3E840 82 aa3.31□□□□□ -1.88
RPA49YNL248C HHF1P02309 103 aaKnown RBP3.3□□□□□ -1.88
RPA49YNL248C RPS28BP0C0X0 67 aaKnown RBP3.3□□□□□ -1.88
RPA49YNL248C RPS28AQ3E7X9 67 aaPredicted RBP3.3□□□□□ -1.88
RPA49YNL248C KSH1Q8TGJ3 72 aa3.28□□□□□ -1.88
RPA49YNL248C YDL012CQ12489 107 aa3.27□□□□□ -1.89
RPA49YNL248C YHR125WP38831 101 aa3.26□□□□□ -1.89
RPA49YNL248C SBH1P52870 82 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms