RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W YHL005CP38752 130 aa3.2□□□□□ -1.9
SNN1YNL086W GSP1P32835 219 aaKnown RBP3.19□□□□□ -1.9
SNN1YNL086W ATG8P38182 117 aaRIP-Chip data3.19□□□□□ -1.9not detected
SNN1YNL086W YPL073CP40323 161 aa3.19□□□□□ -1.9
SNN1YNL086W SBH1P52870 82 aa3.19□□□□□ -1.9
SNN1YNL086W RPL29P05747 59 aaPredicted RBP3.18□□□□□ -1.9
SNN1YNL086W PBI2P0CT04 75 aaKnown RBP3.18□□□□□ -1.9
SNN1YNL086W MRPL11P36521 249 aaPredicted RBP3.18□□□□□ -1.9
SNN1YNL086W VMA21P41806 77 aa3.18□□□□□ -1.9
SNN1YNL086W YNL190WP53872 204 aa3.18□□□□□ -1.9
SNN1YNL086W YNL122CP53921 115 aaPredicted RBP3.18□□□□□ -1.9
SNN1YNL086W YHR007C-AQ07074 71 aa3.18□□□□□ -1.9
SNN1YNL086W POP3P53833 195 aaPredicted RBP3.17□□□□□ -1.9
SNN1YNL086W RUB1Q03919 77 aa3.17□□□□□ -1.9
SNN1YNL086W YMR103CQ04436 120 aa3.17□□□□□ -1.9
SNN1YNL086W SEN15Q04675 128 aa3.17□□□□□ -1.9
SNN1YNL086W FYV12Q08559 129 aa3.17□□□□□ -1.9
SNN1YNL086W QCR8P08525 94 aa3.16□□□□□ -1.9
SNN1YNL086W FUN14P18411 198 aa3.16□□□□□ -1.9
SNN1YNL086W CWC27Q02770 301 aa3.16□□□□□ -1.9
SNN1YNL086W HPA2Q06592 156 aa3.16□□□□□ -1.9
SNN1YNL086W ATP20Q12233 115 aa3.16□□□□□ -1.9
SNN1YNL086W YHR086W-AQ3E746 53 aa3.16□□□□□ -1.9
SNN1YNL086W YBR230W-AQ3E762 66 aa3.16□□□□□ -1.9
SNN1YNL086W YJL127C-BQ3E828 52 aa3.16□□□□□ -1.9
SNN1YNL086W SEC11P15367 167 aa3.15□□□□□ -1.91
SNN1YNL086W GLC8P41818 229 aa3.15□□□□□ -1.91
SNN1YNL086W FYV7Q12247 151 aa3.15□□□□□ -1.91
SNN1YNL086W COA6Q3E846 104 aa3.15□□□□□ -1.91
SNN1YNL086W ATP5P09457 212 aa3.14□□□□□ -1.91
SNN1YNL086W FYV4P38783 130 aaPredicted RBP3.14□□□□□ -1.91
SNN1YNL086W YOR072WQ08486 104 aa3.14□□□□□ -1.91
SNN1YNL086W COX7P10174 60 aa3.13□□□□□ -1.91
SNN1YNL086W GSP2P32836 220 aaKnown RBP3.13□□□□□ -1.91
SNN1YNL086W SAE3P89114 91 aa3.13□□□□□ -1.91
SNN1YNL086W YPL261CQ08976 102 aa3.13□□□□□ -1.91
SNN1YNL086W YIL134C-AQ45U18 67 aa3.13□□□□□ -1.91
SNN1YNL086W YDL022C-AP0C5L6 82 aa3.12□□□□□ -1.91
SNN1YNL086W MRPS12P53732 153 aa3.12□□□□□ -1.91
SNN1YNL086W RAD6P06104 172 aa3.11□□□□□ -1.91
SNN1YNL086W FYV5P25585 152 aa3.08□□□□□ -1.92
SNN1YNL086W PAU17Q12370 124 aa3.08□□□□□ -1.92
SNN1YNL086W IRC21Q04772 201 aa3.07□□□□□ -1.92
SNN1YNL086W NAT5Q08689 176 aa3.06□□□□□ -1.92
SNN1YNL086W RPL36BO14455 100 aaKnown RBP3.05□□□□□ -1.92
SNN1YNL086W YEL067CP39978 195 aa3.05□□□□□ -1.92
SNN1YNL086W ICY1Q04329 127 aa3.05□□□□□ -1.92
SNN1YNL086W PAU23Q07987 124 aa3.05□□□□□ -1.92
SNN1YNL086W YOR381W-AQ3E804 55 aa3.05□□□□□ -1.92
SNN1YNL086W COX8P04039 78 aa3.03□□□□□ -1.92
SNN1YNL086W SLO1Q3E784 85 aa3.03□□□□□ -1.92
SNN1YNL086W LIP1Q03579 150 aa3.01□□□□□ -1.93
SNN1YNL086W CNL1Q06333 122 aa3.01□□□□□ -1.93
SNN1YNL086W YDL157CQ12082 118 aa3.01□□□□□ -1.93
SNN1YNL086W PAI3P01094 68 aa3□□□□□ -1.93
SNN1YNL086W YLR157W-DP0CE99 70 aa3□□□□□ -1.93
SNN1YNL086W YER181CP40097 107 aa3□□□□□ -1.93
SNN1YNL086W YLR162WQ06235 118 aa3□□□□□ -1.93
SNN1YNL086W YOR034C-AQ3E735 80 aa3□□□□□ -1.93
SNN1YNL086W Q0017Q9ZZX8 53 aa3□□□□□ -1.93
SNN1YNL086W SCS22Q6Q595 175 aa2.98□□□□□ -1.93
SNN1YNL086W YOR304C-AO14468 76 aa2.97□□□□□ -1.93
SNN1YNL086W RPS29AP41057 56 aaKnown RBP2.96□□□□□ -1.94
SNN1YNL086W YGL230CP53074 147 aa2.96□□□□□ -1.94
SNN1YNL086W ELC1Q03071 99 aa2.96□□□□□ -1.94
SNN1YNL086W YLR363W-AQ3E747 85 aa2.96□□□□□ -1.94
SNN1YNL086W MSL1P40567 111 aaPredicted RBP2.95□□□□□ -1.94
SNN1YNL086W YDR210WQ03482 75 aa2.95□□□□□ -1.94
SNN1YNL086W RSM18P40033 138 aa2.94□□□□□ -1.94
SNN1YNL086W YNL198CP40166 100 aa2.94□□□□□ -1.94
SNN1YNL086W YOL097W-AQ3E7Y9 61 aa2.94□□□□□ -1.94
SNN1YNL086W YIL102C-AQ2V2P5 75 aa2.93□□□□□ -1.94
SNN1YNL086W SFT1P43682 97 aa2.92□□□□□ -1.94
SNN1YNL086W INO4P13902 151 aa2.91□□□□□ -1.94
SNN1YNL086W YJL009WP47078 108 aa2.91□□□□□ -1.94
SNN1YNL086W YJR128WP47162 119 aa2.91□□□□□ -1.94
SNN1YNL086W YKL044WP36092 106 aa2.9□□□□□ -1.95
SNN1YNL086W RPS29BP41058 56 aaKnown RBP2.9□□□□□ -1.95
SNN1YNL086W COF1Q03048 143 aaKnown RBP2.9□□□□□ -1.95
SNN1YNL086W YIR021W-AQ3E739 70 aa2.9□□□□□ -1.95
SNN1YNL086W ATX1P38636 73 aa2.89□□□□□ -1.95
SNN1YNL086W YHR130CP38834 111 aa2.89□□□□□ -1.95
SNN1YNL086W YFL065CP43539 102 aa2.89□□□□□ -1.95
SNN1YNL086W YPR203WQ08994 102 aa2.89□□□□□ -1.95
SNN1YNL086W YGR039WP53225 103 aa2.87□□□□□ -1.95
SNN1YNL086W YLR296WQ05898 108 aa2.87□□□□□ -1.95
SNN1YNL086W YLR361C-AQ3E795 98 aa2.87□□□□□ -1.95
SNN1YNL086W NHP2P32495 156 aaPredicted RBP2.86□□□□□ -1.95
SNN1YNL086W YER187WP40102 141 aa2.86□□□□□ -1.95
SNN1YNL086W YHL042WP38729 150 aa2.85□□□□□ -1.95
SNN1YNL086W RSM19P53733 91 aaPredicted RBP2.82□□□□□ -1.96
SNN1YNL086W RPA12P32529 125 aaKnown RBP2.8□□□□□ -1.96
SNN1YNL086W YFL041W-AQ3E817 63 aa2.8□□□□□ -1.96
SNN1YNL086W MIC10Q96VH5 97 aa2.8□□□□□ -1.96
SNN1YNL086W HUR1P45820 110 aa2.79□□□□□ -1.96
SNN1YNL086W LSM6Q06406 86 aaKnown RBP2.79□□□□□ -1.96
SNN1YNL086W YHR213W-BQ8TGK1 99 aa2.78□□□□□ -1.96
SNN1YNL086W YCR085WP25650 117 aa2.77□□□□□ -1.97
SNN1YNL086W YDR119W-AQ2V2P9 66 aa2.77□□□□□ -1.97
SNN1YNL086W YJL133C-AQ3E7A3 74 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms