RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A YAL063C-AQ3E791 96 aa4.39□□□□□ -1.71
KSH1YNL024C-A YFL041W-AQ3E817 63 aa4.39□□□□□ -1.71
KSH1YNL024C-A ISD11Q6Q560 94 aa4.39□□□□□ -1.71
KSH1YNL024C-A PEX22P39718 180 aa4.38□□□□□ -1.71
KSH1YNL024C-A YAR1P46683 200 aa4.38□□□□□ -1.71
KSH1YNL024C-A KRE1P17260 313 aa4.37□□□□□ -1.71
KSH1YNL024C-A BET1P22804 142 aa4.36□□□□□ -1.71
KSH1YNL024C-A EMC6Q12431 108 aa4.36□□□□□ -1.71
KSH1YNL024C-A YFL065CP43539 102 aa4.35□□□□□ -1.71
KSH1YNL024C-A YPR195CQ06594 109 aa4.35□□□□□ -1.71
KSH1YNL024C-A YPR203WQ08994 102 aa4.35□□□□□ -1.71
KSH1YNL024C-A YIL002W-AQ3E7Z5 69 aa4.35□□□□□ -1.71
KSH1YNL024C-A YFR009W-AP0C5M9 85 aa4.34□□□□□ -1.71
KSH1YNL024C-A DDR2P89113 61 aa4.34□□□□□ -1.71
KSH1YNL024C-A YHR139C-AO13536 103 aa4.33□□□□□ -1.72
KSH1YNL024C-A YHL042WP38729 150 aa4.33□□□□□ -1.72
KSH1YNL024C-A SHH4Q06236 168 aa4.33□□□□□ -1.72
KSH1YNL024C-A RPL36BO14455 100 aaKnown RBP4.31□□□□□ -1.72
KSH1YNL024C-A YLR156WP0CE96 114 aa4.31□□□□□ -1.72
KSH1YNL024C-A YLR159WP0CE97 114 aa4.31□□□□□ -1.72
KSH1YNL024C-A YLR161WP0CE98 114 aa4.31□□□□□ -1.72
KSH1YNL024C-A LCL1Q02786 101 aa4.31□□□□□ -1.72
KSH1YNL024C-A YGR121W-AQ3E816 71 aa4.31□□□□□ -1.72
KSH1YNL024C-A RAD6P06104 172 aa4.3□□□□□ -1.72
KSH1YNL024C-A YSY6P38374 65 aa4.3□□□□□ -1.72
KSH1YNL024C-A EDC2P40023 145 aaPredicted RBP4.3□□□□□ -1.72
KSH1YNL024C-A YOR072WQ08486 104 aa4.3□□□□□ -1.72
KSH1YNL024C-A TDA8Q6B2U8 126 aa4.3□□□□□ -1.72
KSH1YNL024C-A COX23P38824 151 aa4.29□□□□□ -1.72
KSH1YNL024C-A TDA2P40045 126 aa4.29□□□□□ -1.72
KSH1YNL024C-A ICS3P47034 131 aa4.29□□□□□ -1.72
KSH1YNL024C-A YLR415CO13578 112 aa4.28□□□□□ -1.72
KSH1YNL024C-A SPG1P50088 95 aa4.28□□□□□ -1.72
KSH1YNL024C-A BSC4P53841 131 aa4.28□□□□□ -1.72
KSH1YNL024C-A GIS2P53849 153 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
KSH1YNL024C-A YHR213W-BQ8TGK1 99 aa4.27□□□□□ -1.73
KSH1YNL024C-A YHR007C-AQ07074 71 aa4.26□□□□□ -1.73
KSH1YNL024C-A LCL2Q08045 131 aa4.26□□□□□ -1.73
KSH1YNL024C-A YKL183C-AQ3E765 70 aa4.26□□□□□ -1.73
KSH1YNL024C-A YBR182C-AQ8TGU6 64 aa4.26□□□□□ -1.73
KSH1YNL024C-A YCR050CP25630 102 aa4.25□□□□□ -1.73
KSH1YNL024C-A YLR285C-AQ3E771 56 aa4.25□□□□□ -1.73
KSH1YNL024C-A YJR085CP47131 105 aaKnown RBP4.24□□□□□ -1.73
KSH1YNL024C-A RPL38P49167 78 aaKnown RBP4.24□□□□□ -1.73
KSH1YNL024C-A COF1Q03048 143 aaKnown RBP4.24□□□□□ -1.73
KSH1YNL024C-A ATP20Q12233 115 aa4.24□□□□□ -1.73
KSH1YNL024C-A YJL133C-AQ3E7A3 74 aa4.24□□□□□ -1.73
KSH1YNL024C-A RSM18P40033 138 aa4.23□□□□□ -1.73
KSH1YNL024C-A HOT13P36078 116 aa4.22□□□□□ -1.73
KSH1YNL024C-A EDC1P53080 175 aaPredicted RBP4.22□□□□□ -1.73
KSH1YNL024C-A ECM19Q06011 112 aa4.22□□□□□ -1.73
KSH1YNL024C-A YLR162WQ06235 118 aa4.22□□□□□ -1.73
KSH1YNL024C-A YPL038W-AQ3E7B4 63 aa4.22□□□□□ -1.73
KSH1YNL024C-A YBL112CQ3E7Y4 105 aa4.22□□□□□ -1.73
KSH1YNL024C-A YOR304C-AO14468 76 aa4.21□□□□□ -1.74
KSH1YNL024C-A YNL184CP53876 108 aa4.21□□□□□ -1.74
KSH1YNL024C-A YEL045CP32616 141 aa4.2□□□□□ -1.74
KSH1YNL024C-A YGR039WP53225 103 aa4.2□□□□□ -1.74
KSH1YNL024C-A YDR119W-AQ2V2P9 66 aa4.2□□□□□ -1.74
KSH1YNL024C-A MMS2P53152 137 aa4.19□□□□□ -1.74
KSH1YNL024C-A MIC10Q96VH5 97 aa4.19□□□□□ -1.74
KSH1YNL024C-A YJL197C-AP0C5P0 93 aa4.18□□□□□ -1.74
KSH1YNL024C-A YHL018WP38744 120 aaPredicted RBP4.17□□□□□ -1.74
KSH1YNL024C-A YOL014WQ08110 124 aa4.17□□□□□ -1.74
KSH1YNL024C-A YOL097W-AQ3E7Y9 61 aa4.16□□□□□ -1.74
KSH1YNL024C-A YLR157W-DP0CE99 70 aa4.15□□□□□ -1.75
KSH1YNL024C-A TOM6P33448 61 aa4.15□□□□□ -1.75
KSH1YNL024C-A YOR268CQ08734 132 aa4.15□□□□□ -1.75
KSH1YNL024C-A YOR314WQ12506 109 aa4.15□□□□□ -1.75
KSH1YNL024C-A YBR027CP38220 110 aa4.13□□□□□ -1.75
KSH1YNL024C-A YMR230W-AQ3E7B5 62 aa4.12□□□□□ -1.75
KSH1YNL024C-A YGL149WP53116 101 aa4.1□□□□□ -1.75
KSH1YNL024C-A RPL36AP05745 100 aaPredicted RBP4.08□□□□□ -1.76
KSH1YNL024C-A YAR064WP39563 99 aa4.08□□□□□ -1.76
KSH1YNL024C-A YER187WP40102 141 aa4.08□□□□□ -1.76
KSH1YNL024C-A YDR182W-AQ3E796 67 aa4.08□□□□□ -1.76
KSH1YNL024C-A YDR246W-AQ3E763 66 aa4.07□□□□□ -1.76
KSH1YNL024C-A KSH1Q8TGJ3 72 aa4.07□□□□□ -1.76
KSH1YNL024C-A NOP10Q6Q547 58 aaPredicted RBP4.06□□□□□ -1.76
KSH1YNL024C-A YCR043CP25361 127 aa4.05□□□□□ -1.76
KSH1YNL024C-A AIM4P38305 123 aaPredicted RBP4.05□□□□□ -1.76
KSH1YNL024C-A YOL013W-AP0C272 63 aaPredicted RBP4.03□□□□□ -1.76
KSH1YNL024C-A DDR48P18899 430 aaKnown RBP4.03□□□□□ -1.76
KSH1YNL024C-A KTI11Q3E840 82 aa4.02□□□□□ -1.77
KSH1YNL024C-A YHR073W-AP0C5N7 58 aa4.01□□□□□ -1.77
KSH1YNL024C-A YHL005CP38752 130 aa4.01□□□□□ -1.77
KSH1YNL024C-A LIP1Q03579 150 aa4.01□□□□□ -1.77
KSH1YNL024C-A YIR021W-AQ3E739 70 aa4.01□□□□□ -1.77
KSH1YNL024C-A YOL166W-AQ8TGJ1 51 aa4.01□□□□□ -1.77
KSH1YNL024C-A YPL080CQ02826 108 aa4□□□□□ -1.77
KSH1YNL024C-A YPR153WQ06537 140 aa3.99□□□□□ -1.77
KSH1YNL024C-A YIL102CP40488 101 aa3.98□□□□□ -1.77
KSH1YNL024C-A COX7P10174 60 aa3.97□□□□□ -1.77
KSH1YNL024C-A YDL012CQ12489 107 aa3.97□□□□□ -1.77
KSH1YNL024C-A YFL067WP43537 175 aa3.95□□□□□ -1.78
KSH1YNL024C-A YDR010CQ12426 110 aa3.95□□□□□ -1.78
KSH1YNL024C-A YHR125WP38831 101 aa3.93□□□□□ -1.78
KSH1YNL024C-A YGR164WP53291 111 aa3.91□□□□□ -1.78
KSH1YNL024C-A YLR361C-AQ3E795 98 aa3.89□□□□□ -1.79
KSH1YNL024C-A HHF1P02309 103 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms