RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C BSC4P53841 131 aa1.81□□□□□ -2.12
CUS1YMR240C COX19Q3E731 98 aa1.81□□□□□ -2.12
CUS1YMR240C YNR034W-AQ3E841 98 aa1.81□□□□□ -2.12
CUS1YMR240C BLM10P43583 2143 aa1.81□□□□□ -2.12
CUS1YMR240C YLR255CO13574 117 aa1.8□□□□□ -2.12
CUS1YMR240C YBR292CP38357 123 aa1.8□□□□□ -2.12
CUS1YMR240C YIL086CP40503 102 aa1.8□□□□□ -2.12
CUS1YMR240C LCL1Q02786 101 aa1.8□□□□□ -2.12
CUS1YMR240C PAU20Q08322 120 aa1.8□□□□□ -2.12
CUS1YMR240C POL2P21951 2222 aaKnown RBP1.8□□□□□ -2.12
CUS1YMR240C RPS11AP0CX47 156 aaKnown RBP1.79□□□□□ -2.12
CUS1YMR240C RPS11BP0CX48 156 aaKnown RBP1.79□□□□□ -2.12
CUS1YMR240C YHR214C-DP0CX93 97 aa1.79□□□□□ -2.12
CUS1YMR240C YKL065W-AQ2V2P2 73 aa1.79□□□□□ -2.12
CUS1YMR240C YDR381C-AQ3E6R5 114 aa1.79□□□□□ -2.12
CUS1YMR240C PAI3P01094 68 aa1.78□□□□□ -2.12
CUS1YMR240C PDX3P38075 228 aaKnown RBP1.78□□□□□ -2.12
CUS1YMR240C MPC2P38857 129 aa1.78□□□□□ -2.12
CUS1YMR240C RPL37BP51402 88 aaKnown RBP1.78□□□□□ -2.12
CUS1YMR240C SHU1P38751 150 aa1.77□□□□□ -2.13
CUS1YMR240C YJR128WP47162 119 aa1.77□□□□□ -2.13
CUS1YMR240C YOR314WQ12506 109 aa1.77□□□□□ -2.13
CUS1YMR240C YDR119W-AQ2V2P9 66 aa1.77□□□□□ -2.13
CUS1YMR240C TAO3P40468 2376 aa1.76□□□□□ -2.13
CUS1YMR240C YPR145C-AQ2V2P0 78 aa1.76□□□□□ -2.13
CUS1YMR240C YDR524C-BQ3E6R4 66 aa1.76□□□□□ -2.13
CUS1YMR240C YKL018C-AQ3E7A7 99 aa1.76□□□□□ -2.13
CUS1YMR240C YER188C-AP0C0V2 99 aa1.75□□□□□ -2.13
CUS1YMR240C YOR105WQ08504 108 aa1.75□□□□□ -2.13
CUS1YMR240C YHR213W-BQ8TGK1 99 aa1.75□□□□□ -2.13
CUS1YMR240C HHY1P39982 102 aa1.74□□□□□ -2.13
CUS1YMR240C SWM2P40342 146 aa1.74□□□□□ -2.13
CUS1YMR240C CSF1Q12150 2958 aa1.74□□□□□ -2.13
CUS1YMR240C SEN1Q00416 2231 aaKnown RBP1.74□□□□□ -2.13
CUS1YMR240C YAL065CO13511 128 aa1.72□□□□□ -2.13
CUS1YMR240C FPR2P32472 135 aa1.72□□□□□ -2.13
CUS1YMR240C PAU23Q07987 124 aa1.72□□□□□ -2.13
CUS1YMR240C PAU17Q12370 124 aa1.72□□□□□ -2.13
CUS1YMR240C YDR010CQ12426 110 aa1.72□□□□□ -2.13
CUS1YMR240C ATX1P38636 73 aa1.71□□□□□ -2.14
CUS1YMR240C YMR141CP40211 102 aa1.71□□□□□ -2.14
CUS1YMR240C YOL131WQ08270 108 aa1.71□□□□□ -2.14
CUS1YMR240C FMP27Q06179 2628 aa1.71□□□□□ -2.14
CUS1YMR240C YNL042W-BQ3E7Z2 85 aa1.69□□□□□ -2.14
CUS1YMR240C NOP10Q6Q547 58 aaPredicted RBP1.68□□□□□ -2.14
CUS1YMR240C YPR117WQ06116 2489 aa1.68□□□□□ -2.14
CUS1YMR240C QCR9P22289 66 aa1.67□□□□□ -2.14
CUS1YMR240C YFL041W-AQ3E817 63 aa1.67□□□□□ -2.14
CUS1YMR240C YGR121W-AQ3E816 71 aa1.66□□□□□ -2.14
CUS1YMR240C YIL156W-BQ2V2P4 73 aa1.66□□□□□ -2.14
CUS1YMR240C YOR034C-AQ3E735 80 aa1.66□□□□□ -2.14
CUS1YMR240C YBR072C-AQ3E794 53 aa1.66□□□□□ -2.14
CUS1YMR240C YMR122W-AQ3E842 84 aa1.66□□□□□ -2.14
CUS1YMR240C IRA1P18963 3092 aa1.65□□□□□ -2.15
CUS1YMR240C BPH1P25356 2167 aa1.65□□□□□ -2.15
CUS1YMR240C YHR173CP38864 112 aa1.65□□□□□ -2.15
CUS1YMR240C YBR201C-AQ2V2Q3 67 aa1.65□□□□□ -2.15
CUS1YMR240C IRA2P19158 3079 aa1.64□□□□□ -2.15
CUS1YMR240C YDR034W-BQ6Q5X2 51 aa1.64□□□□□ -2.15
CUS1YMR240C Q0032Q9ZZX7 96 aa1.64□□□□□ -2.15
CUS1YMR240C TIM12P32830 109 aa1.63□□□□□ -2.15
CUS1YMR240C COX7P10174 60 aa1.62□□□□□ -2.15
CUS1YMR240C YOL097W-AQ3E7Y9 61 aa1.62□□□□□ -2.15
CUS1YMR240C SSS1P35179 80 aa1.61□□□□□ -2.15
CUS1YMR240C ATP18P81450 59 aa1.61□□□□□ -2.15
CUS1YMR240C YGR035W-AQ45U48 73 aa1.61□□□□□ -2.15
CUS1YMR240C RPS27AP35997 82 aaKnown RBP1.6□□□□□ -2.15
CUS1YMR240C RPS27BP38711 82 aa1.6□□□□□ -2.15
CUS1YMR240C SPI1P40092 148 aa1.6□□□□□ -2.15
CUS1YMR240C TEL1P38110 2787 aa1.6□□□□□ -2.15
CUS1YMR240C YFR010W-AP0C5N0 62 aa1.59□□□□□ -2.16
CUS1YMR240C RPL38P49167 78 aaKnown RBP1.59□□□□□ -2.16
CUS1YMR240C TRA1P38811 3744 aa1.58□□□□□ -2.16
CUS1YMR240C COX9P07255 59 aa1.58□□□□□ -2.16
CUS1YMR240C YNL198CP40166 100 aa1.58□□□□□ -2.16
CUS1YMR240C NCE101Q02820 53 aa1.58□□□□□ -2.16
CUS1YMR240C YIL046W-AQ3E7Z4 54 aa1.58□□□□□ -2.16
CUS1YMR240C GCN1P33892 2672 aaKnown RBP1.57□□□□□ -2.16
CUS1YMR240C URA2P07259 2214 aaKnown RBP1.57□□□□□ -2.16
CUS1YMR240C YDL022C-AP0C5L6 82 aa1.57□□□□□ -2.16
CUS1YMR240C RPL43AP0CX25 92 aaKnown RBP1.57□□□□□ -2.16
CUS1YMR240C RPL43BP0CX26 92 aa1.57□□□□□ -2.16
CUS1YMR240C PAU7P39545 55 aa1.57□□□□□ -2.16
CUS1YMR240C SGF11Q03067 99 aa1.57□□□□□ -2.16
CUS1YMR240C TOR2P32600 2474 aaKnown RBP1.56□□□□□ -2.16
CUS1YMR240C AUA1P32450 94 aa1.55□□□□□ -2.16
CUS1YMR240C ATP17Q06405 101 aa1.55□□□□□ -2.16
CUS1YMR240C VMA9Q3E7B6 73 aa1.55□□□□□ -2.16
CUS1YMR240C SDH6Q3E785 79 aa1.54□□□□□ -2.16
CUS1YMR240C RPC10P40422 70 aa1.53□□□□□ -2.16
CUS1YMR240C ERI1P62651 68 aaKnown RBP1.53□□□□□ -2.16
CUS1YMR240C PRP8P33334 2413 aaKnown RBP1.53□□□□□ -2.16
CUS1YMR240C YSY6P38374 65 aa1.52□□□□□ -2.17
CUS1YMR240C YLR146W-AQ2V2P1 62 aa1.52□□□□□ -2.17
CUS1YMR240C YIL102C-AQ2V2P5 75 aa1.52□□□□□ -2.17
CUS1YMR240C YOR192C-CQ3E736 78 aa1.52□□□□□ -2.17
CUS1YMR240C COA2Q3E823 68 aa1.52□□□□□ -2.17
CUS1YMR240C YLR307C-AQ3E825 87 aa1.52□□□□□ -2.17
CUS1YMR240C YPR108W-AQ3E7B3 70 aa1.51□□□□□ -2.17
CUS1YMR240C YLR157W-EP0CF00 54 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms