RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C YLR159WP0CE97 114 aa6.71□□□□□ -1.34
ARP6YLR085C YLR161WP0CE98 114 aa6.71□□□□□ -1.34
ARP6YLR085C YKL069WP36088 180 aa6.71□□□□□ -1.34
ARP6YLR085C YGL193CP53097 103 aa6.71□□□□□ -1.34
ARP6YLR085C YAL063C-AQ3E791 96 aa6.71□□□□□ -1.34
ARP6YLR085C SFT1P43682 97 aa6.7□□□□□ -1.34
ARP6YLR085C DDR2P89113 61 aa6.7□□□□□ -1.34
ARP6YLR085C RAD6P06104 172 aa6.69□□□□□ -1.34
ARP6YLR085C YAR1P46683 200 aa6.68□□□□□ -1.34
ARP6YLR085C YHR139C-AO13536 103 aa6.67□□□□□ -1.34
ARP6YLR085C KRE1P17260 313 aa6.67□□□□□ -1.34
ARP6YLR085C SPT4P32914 102 aaPredicted RBP6.67□□□□□ -1.34
ARP6YLR085C LCL2Q08045 131 aa6.67□□□□□ -1.34
ARP6YLR085C YFR009W-AP0C5M9 85 aa6.66□□□□□ -1.34
ARP6YLR085C YER039C-AP0CD97 72 aa6.66□□□□□ -1.34
ARP6YLR085C BSC4P53841 131 aa6.65□□□□□ -1.35
ARP6YLR085C YHR007C-AQ07074 71 aa6.65□□□□□ -1.35
ARP6YLR085C YFL041W-AQ3E817 63 aa6.65□□□□□ -1.35
ARP6YLR085C EDC1P53080 175 aaPredicted RBP6.64□□□□□ -1.35
ARP6YLR085C EMC6Q12431 108 aa6.64□□□□□ -1.35
ARP6YLR085C RPL38P49167 78 aaKnown RBP6.63□□□□□ -1.35
ARP6YLR085C RPL36BO14455 100 aaKnown RBP6.61□□□□□ -1.35
ARP6YLR085C TDA2P40045 126 aa6.6□□□□□ -1.35
ARP6YLR085C GIS2P53849 153 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
ARP6YLR085C YOR072WQ08486 104 aa6.6□□□□□ -1.35
ARP6YLR085C GAT4P40569 121 aa6.59□□□□□ -1.35
ARP6YLR085C ICS3P47034 131 aa6.59□□□□□ -1.35
ARP6YLR085C RSM19P53733 91 aaPredicted RBP6.59□□□□□ -1.35
ARP6YLR085C LCL1Q02786 101 aa6.57□□□□□ -1.36
ARP6YLR085C YHR213W-BQ8TGK1 99 aa6.57□□□□□ -1.36
ARP6YLR085C YHL042WP38729 150 aa6.56□□□□□ -1.36
ARP6YLR085C YLR285C-AQ3E771 56 aa6.55□□□□□ -1.36
ARP6YLR085C EDC2P40023 145 aaPredicted RBP6.54□□□□□ -1.36
ARP6YLR085C YGR039WP53225 103 aa6.53□□□□□ -1.36
ARP6YLR085C SHH4Q06236 168 aa6.53□□□□□ -1.36
ARP6YLR085C YJL133C-AQ3E7A3 74 aa6.53□□□□□ -1.36
ARP6YLR085C MMS2P53152 137 aa6.52□□□□□ -1.37
ARP6YLR085C YSY6P38374 65 aa6.51□□□□□ -1.37
ARP6YLR085C COX23P38824 151 aa6.51□□□□□ -1.37
ARP6YLR085C RSM18P40033 138 aa6.51□□□□□ -1.37
ARP6YLR085C COF1Q03048 143 aaKnown RBP6.51□□□□□ -1.37
ARP6YLR085C YGR121W-AQ3E816 71 aa6.51□□□□□ -1.37
ARP6YLR085C ATP20Q12233 115 aa6.5□□□□□ -1.37
ARP6YLR085C YMR230W-AQ3E7B5 62 aa6.5□□□□□ -1.37
ARP6YLR085C YOL014WQ08110 124 aa6.49□□□□□ -1.37
ARP6YLR085C TDA8Q6B2U8 126 aa6.49□□□□□ -1.37
ARP6YLR085C SPG1P50088 95 aa6.48□□□□□ -1.37
ARP6YLR085C YNL184CP53876 108 aa6.47□□□□□ -1.37
ARP6YLR085C YLR415CO13578 112 aa6.46□□□□□ -1.38
ARP6YLR085C ECM19Q06011 112 aa6.46□□□□□ -1.38
ARP6YLR085C YHL018WP38744 120 aaPredicted RBP6.44□□□□□ -1.38
ARP6YLR085C YDR119W-AQ2V2P9 66 aa6.44□□□□□ -1.38
ARP6YLR085C YBL112CQ3E7Y4 105 aa6.44□□□□□ -1.38
ARP6YLR085C MIC10Q96VH5 97 aa6.44□□□□□ -1.38
ARP6YLR085C YBR027CP38220 110 aa6.43□□□□□ -1.38
ARP6YLR085C YLR162WQ06235 118 aa6.43□□□□□ -1.38
ARP6YLR085C YJR085CP47131 105 aaKnown RBP6.41□□□□□ -1.38
ARP6YLR085C DDR48P18899 430 aaKnown RBP6.4□□□□□ -1.39
ARP6YLR085C YEL045CP32616 141 aa6.4□□□□□ -1.39
ARP6YLR085C YGL149WP53116 101 aa6.4□□□□□ -1.39
ARP6YLR085C YOR268CQ08734 132 aa6.39□□□□□ -1.39
ARP6YLR085C YKL183C-AQ3E765 70 aa6.39□□□□□ -1.39
ARP6YLR085C YOR304C-AO14468 76 aa6.38□□□□□ -1.39
ARP6YLR085C YCR050CP25630 102 aa6.37□□□□□ -1.39
ARP6YLR085C YPL038W-AQ3E7B4 63 aa6.37□□□□□ -1.39
ARP6YLR085C YBR182C-AQ8TGU6 64 aa6.36□□□□□ -1.39
ARP6YLR085C YJL197C-AP0C5P0 93 aa6.35□□□□□ -1.39
ARP6YLR085C YLR157W-DP0CE99 70 aa6.34□□□□□ -1.39
ARP6YLR085C MDN1Q12019 4910 aaKnown RBP6.33□□□□□ -1.4
ARP6YLR085C YCR043CP25361 127 aa6.31□□□□□ -1.4
ARP6YLR085C YOR314WQ12506 109 aa6.31□□□□□ -1.4
ARP6YLR085C YOL097W-AQ3E7Y9 61 aa6.29□□□□□ -1.4
ARP6YLR085C KTI11Q3E840 82 aa6.26□□□□□ -1.41
ARP6YLR085C NOP10Q6Q547 58 aaPredicted RBP6.26□□□□□ -1.41
ARP6YLR085C YAR064WP39563 99 aa6.25□□□□□ -1.41
ARP6YLR085C YIL102CP40488 101 aa6.25□□□□□ -1.41
ARP6YLR085C HOT13P36078 116 aa6.25□□□□□ -1.41
ARP6YLR085C YER187WP40102 141 aa6.25□□□□□ -1.41
ARP6YLR085C YPL080CQ02826 108 aa6.25□□□□□ -1.41
ARP6YLR085C TOM6P33448 61 aa6.24□□□□□ -1.41
ARP6YLR085C AIM4P38305 123 aaPredicted RBP6.24□□□□□ -1.41
ARP6YLR085C YFL067WP43537 175 aa6.24□□□□□ -1.41
ARP6YLR085C RPL36AP05745 100 aaPredicted RBP6.22□□□□□ -1.41
ARP6YLR085C YDR246W-AQ3E763 66 aa6.22□□□□□ -1.41
ARP6YLR085C KSH1Q8TGJ3 72 aa6.22□□□□□ -1.41
ARP6YLR085C LIP1Q03579 150 aa6.19□□□□□ -1.42
ARP6YLR085C YDR010CQ12426 110 aa6.16□□□□□ -1.42
ARP6YLR085C YOL013W-AP0C272 63 aaPredicted RBP6.15□□□□□ -1.43
ARP6YLR085C YHL005CP38752 130 aa6.14□□□□□ -1.43
ARP6YLR085C YPR153WQ06537 140 aa6.13□□□□□ -1.43
ARP6YLR085C YDL012CQ12489 107 aa6.13□□□□□ -1.43
ARP6YLR085C YOL166W-AQ8TGJ1 51 aa6.11□□□□□ -1.43
ARP6YLR085C YLR361C-AQ3E795 98 aa6.1□□□□□ -1.43
ARP6YLR085C YDR182W-AQ3E796 67 aa6.1□□□□□ -1.43
ARP6YLR085C HHF1P02309 103 aaKnown RBP6.06□□□□□ -1.44
ARP6YLR085C YHR073W-AP0C5N7 58 aa6.03□□□□□ -1.44
ARP6YLR085C COX7P10174 60 aa6.03□□□□□ -1.44
ARP6YLR085C RPS30AP0CX33 63 aaKnown RBP5.99□□□□□ -1.45
ARP6YLR085C RPS30BP0CX34 63 aaKnown RBP5.99□□□□□ -1.45
ARP6YLR085C YIR021W-AQ3E739 70 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms