RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YJL127C-BQ3E828 52 aa5.16□□□□□ -1.58
SNF7YLR025W YLL066W-BQ8TGJ7 56 aa5.16□□□□□ -1.58
SNF7YLR025W YOR304C-AO14468 76 aa5.15□□□□□ -1.59
SNF7YLR025W SMP1P38128 452 aa5.15□□□□□ -1.59
SNF7YLR025W TDA2P40045 126 aa5.15□□□□□ -1.59
SNF7YLR025W RPL38P49167 78 aaKnown RBP5.15□□□□□ -1.59
SNF7YLR025W STF1P01098 86 aa5.14□□□□□ -1.59
SNF7YLR025W BET1P22804 142 aa5.14□□□□□ -1.59
SNF7YLR025W YDR029WQ12111 104 aa5.14□□□□□ -1.59
SNF7YLR025W RSM19P53733 91 aaPredicted RBP5.13□□□□□ -1.59
SNF7YLR025W YBR230W-AQ3E762 66 aa5.13□□□□□ -1.59
SNF7YLR025W YSY6P38374 65 aa5.12□□□□□ -1.59
SNF7YLR025W IGD1P43598 195 aa5.12□□□□□ -1.59
SNF7YLR025W YLR285C-AQ3E771 56 aa5.12□□□□□ -1.59
SNF7YLR025W YNL042W-BQ3E7Z2 85 aa5.12□□□□□ -1.59
SNF7YLR025W ECM12O13529 151 aa5.11□□□□□ -1.59
SNF7YLR025W AUA1P32450 94 aa5.11□□□□□ -1.59
SNF7YLR025W YFR009W-AP0C5M9 85 aa5.09□□□□□ -1.59
SNF7YLR025W SHH4Q06236 168 aa5.09□□□□□ -1.59
SNF7YLR025W YBL112CQ3E7Y4 105 aa5.09□□□□□ -1.59
SNF7YLR025W YER039C-AP0CD97 72 aa5.07□□□□□ -1.6
SNF7YLR025W PEX22P39718 180 aa5.07□□□□□ -1.6
SNF7YLR025W EDC1P53080 175 aaPredicted RBP5.07□□□□□ -1.6
SNF7YLR025W DDR2P89113 61 aa5.07□□□□□ -1.6
SNF7YLR025W SPT4P32914 102 aaPredicted RBP5.06□□□□□ -1.6
SNF7YLR025W YHL018WP38744 120 aaPredicted RBP5.06□□□□□ -1.6
SNF7YLR025W ICS3P47034 131 aa5.06□□□□□ -1.6
SNF7YLR025W YDR119W-AQ2V2P9 66 aa5.06□□□□□ -1.6
SNF7YLR025W YDR034C-AP0C289 58 aa5.05□□□□□ -1.6
SNF7YLR025W YLR156WP0CE96 114 aa5.05□□□□□ -1.6
SNF7YLR025W YLR159WP0CE97 114 aa5.05□□□□□ -1.6
SNF7YLR025W YLR161WP0CE98 114 aa5.05□□□□□ -1.6
SNF7YLR025W ATP20Q12233 115 aa5.05□□□□□ -1.6
SNF7YLR025W YKL183C-AQ3E765 70 aa5.05□□□□□ -1.6
SNF7YLR025W YLR307C-AQ3E825 87 aa5.05□□□□□ -1.6
SNF7YLR025W RPL36BO14455 100 aaKnown RBP5.04□□□□□ -1.6
SNF7YLR025W EDC2P40023 145 aaPredicted RBP5.04□□□□□ -1.6
SNF7YLR025W RSM18P40033 138 aa5.04□□□□□ -1.6
SNF7YLR025W BSC4P53841 131 aa5.04□□□□□ -1.6
SNF7YLR025W YPL038W-AQ3E7B4 63 aa5.04□□□□□ -1.6
SNF7YLR025W YHR007C-AQ07074 71 aa5.03□□□□□ -1.6
SNF7YLR025W YHR213W-BQ8TGK1 99 aa5.03□□□□□ -1.6
SNF7YLR025W GAT4P40569 121 aa5.02□□□□□ -1.61
SNF7YLR025W YGL193CP53097 103 aa5.02□□□□□ -1.61
SNF7YLR025W YOR072WQ08486 104 aa5.02□□□□□ -1.61
SNF7YLR025W COX23P38824 151 aa5.01□□□□□ -1.61
SNF7YLR025W YJL133C-AQ3E7A3 74 aa5□□□□□ -1.61
SNF7YLR025W TOM6P33448 61 aa4.99□□□□□ -1.61
SNF7YLR025W YPR195CQ06594 109 aa4.98□□□□□ -1.61
SNF7YLR025W YOR314WQ12506 109 aa4.98□□□□□ -1.61
SNF7YLR025W YCR043CP25361 127 aa4.96□□□□□ -1.62
SNF7YLR025W YCR050CP25630 102 aa4.95□□□□□ -1.62
SNF7YLR025W YER187WP40102 141 aa4.95□□□□□ -1.62
SNF7YLR025W AIM4P38305 123 aaPredicted RBP4.94□□□□□ -1.62
SNF7YLR025W YOL014WQ08110 124 aa4.94□□□□□ -1.62
SNF7YLR025W TDA8Q6B2U8 126 aa4.94□□□□□ -1.62
SNF7YLR025W ECM19Q06011 112 aa4.93□□□□□ -1.62
SNF7YLR025W GIS2P53849 153 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62 RIP-Chip
SNF7YLR025W YPL080CQ02826 108 aa4.92□□□□□ -1.62
SNF7YLR025W YIR021W-AQ3E739 70 aa4.92□□□□□ -1.62
SNF7YLR025W YLR162WQ06235 118 aa4.91□□□□□ -1.62
SNF7YLR025W YGR121W-AQ3E816 71 aa4.91□□□□□ -1.62
SNF7YLR025W YIL102CP40488 101 aa4.9□□□□□ -1.63
SNF7YLR025W MIC10Q96VH5 97 aa4.9□□□□□ -1.63
SNF7YLR025W SPG1P50088 95 aa4.89□□□□□ -1.63
SNF7YLR025W LCL1Q02786 101 aa4.89□□□□□ -1.63
SNF7YLR025W NOP10Q6Q547 58 aaPredicted RBP4.88□□□□□ -1.63
SNF7YLR025W YLR157W-DP0CE99 70 aa4.87□□□□□ -1.63
SNF7YLR025W YEL045CP32616 141 aa4.87□□□□□ -1.63
SNF7YLR025W LCL2Q08045 131 aa4.85□□□□□ -1.63
SNF7YLR025W YMR230W-AQ3E7B5 62 aa4.84□□□□□ -1.63
SNF7YLR025W MMS2P53152 137 aa4.83□□□□□ -1.64
SNF7YLR025W LIP1Q03579 150 aa4.83□□□□□ -1.64
SNF7YLR025W DYN1P36022 4092 aa4.83□□□□□ -1.64
SNF7YLR025W RPL36AP05745 100 aaPredicted RBP4.82□□□□□ -1.64
SNF7YLR025W YBR027CP38220 110 aa4.82□□□□□ -1.64
SNF7YLR025W YJR085CP47131 105 aaKnown RBP4.82□□□□□ -1.64
SNF7YLR025W YDR246W-AQ3E763 66 aa4.82□□□□□ -1.64
SNF7YLR025W YDR182W-AQ3E796 67 aa4.82□□□□□ -1.64
SNF7YLR025W YAR064WP39563 99 aa4.81□□□□□ -1.64
SNF7YLR025W YOL097W-AQ3E7Y9 61 aa4.8□□□□□ -1.64
SNF7YLR025W YGL149WP53116 101 aa4.79□□□□□ -1.64
SNF7YLR025W YOR268CQ08734 132 aa4.78□□□□□ -1.64
SNF7YLR025W YOL013W-AP0C272 63 aaPredicted RBP4.77□□□□□ -1.65
SNF7YLR025W YHL005CP38752 130 aa4.77□□□□□ -1.65
SNF7YLR025W YJL197C-AP0C5P0 93 aa4.76□□□□□ -1.65
SNF7YLR025W YLR361C-AQ3E795 98 aa4.76□□□□□ -1.65
SNF7YLR025W YOL166W-AQ8TGJ1 51 aa4.75□□□□□ -1.65
SNF7YLR025W KTI11Q3E840 82 aa4.74□□□□□ -1.65
SNF7YLR025W HHF1P02309 103 aaKnown RBP4.72□□□□□ -1.65
SNF7YLR025W RPS30AP0CX33 63 aaKnown RBP4.72□□□□□ -1.65
SNF7YLR025W RPS30BP0CX34 63 aaKnown RBP4.72□□□□□ -1.65
SNF7YLR025W YPR153WQ06537 140 aa4.72□□□□□ -1.65
SNF7YLR025W DDR48P18899 430 aaKnown RBP4.69□□□□□ -1.66
SNF7YLR025W SBH1P52870 82 aa4.69□□□□□ -1.66
SNF7YLR025W KSH1Q8TGJ3 72 aa4.69□□□□□ -1.66
SNF7YLR025W SDH6Q3E785 79 aa4.68□□□□□ -1.66
SNF7YLR025W YHR125WP38831 101 aa4.64□□□□□ -1.67
SNF7YLR025W YDL012CQ12489 107 aa4.63□□□□□ -1.67
SNF7YLR025W YOR381W-AQ3E804 55 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms