RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeastyeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOA1YKL213C YOL085CQ99345 113 aa3.61□□□□□ -1.83
DOA1YKL213C AIM19P40502 157 aa3.59□□□□□ -1.83
DOA1YKL213C URM1P40554 99 aaPredicted RBP3.59□□□□□ -1.83
DOA1YKL213C MPC3P53311 146 aa3.59□□□□□ -1.83
DOA1YKL213C YKL065W-AQ2V2P2 73 aa3.59□□□□□ -1.83
DOA1YKL213C MDN1Q12019 4910 aaKnown RBP3.59□□□□□ -1.83
DOA1YKL213C RGM1Q00453 211 aa3.59□□□□□ -1.84
DOA1YKL213C OST5Q92316 86 aa3.59□□□□□ -1.84
DOA1YKL213C YBR209WP38311 105 aa3.58□□□□□ -1.84
DOA1YKL213C YGR121W-AQ3E816 71 aa3.58□□□□□ -1.84
DOA1YKL213C RPS11AP0CX47 156 aaKnown RBP3.58□□□□□ -1.84
DOA1YKL213C RPS11BP0CX48 156 aaKnown RBP3.58□□□□□ -1.84
DOA1YKL213C YDR246W-AQ3E763 66 aa3.58□□□□□ -1.84
DOA1YKL213C MSA2P36157 363 aa3.57□□□□□ -1.84
DOA1YKL213C PAU7P39545 55 aa3.57□□□□□ -1.84
DOA1YKL213C ERI1P62651 68 aaKnown RBP3.57□□□□□ -1.84
DOA1YKL213C YLR162WQ06235 118 aa3.57□□□□□ -1.84
DOA1YKL213C AUA1P32450 94 aa3.56□□□□□ -1.84
DOA1YKL213C COX14P39103 70 aa3.56□□□□□ -1.84
DOA1YKL213C ARC15P40518 154 aaRIP-Chip data3.56□□□□□ -1.84not detected
DOA1YKL213C YBR200W-AQ3E755 54 aa3.56□□□□□ -1.84
DOA1YKL213C YER188C-AP0C0V2 99 aa3.55□□□□□ -1.84
DOA1YKL213C YPR053CQ6Q5F3 151 aa3.54□□□□□ -1.84
DOA1YKL213C YCR001WP25347 104 aa3.53□□□□□ -1.84
DOA1YKL213C RPL26BP53221 127 aaKnown RBP3.53□□□□□ -1.84
DOA1YKL213C YMR122CQ03879 124 aa3.53□□□□□ -1.84
DOA1YKL213C RDS3Q06835 107 aaPredicted RBP3.53□□□□□ -1.84
DOA1YKL213C RPR2P40571 144 aa3.53□□□□□ -1.84
DOA1YKL213C VAM10Q08474 114 aa3.53□□□□□ -1.84
DOA1YKL213C RPL36BO14455 100 aaKnown RBP3.52□□□□□ -1.85
DOA1YKL213C RPL36AP05745 100 aaPredicted RBP3.52□□□□□ -1.85
DOA1YKL213C YKR032WP36127 104 aa3.52□□□□□ -1.85
DOA1YKL213C SGF11Q03067 99 aa3.52□□□□□ -1.85
DOA1YKL213C DCV1P43595 202 aa3.51□□□□□ -1.85
DOA1YKL213C YGL149WP53116 101 aa3.5□□□□□ -1.85
DOA1YKL213C YPR153WQ06537 140 aa3.5□□□□□ -1.85
DOA1YKL213C YLR285C-AQ3E771 56 aa3.5□□□□□ -1.85
DOA1YKL213C COA3Q3E7B2 85 aa3.5□□□□□ -1.85
DOA1YKL213C KRE9P39005 276 aa3.49□□□□□ -1.85
DOA1YKL213C YGR240C-AQ3E786 66 aa3.49□□□□□ -1.85
DOA1YKL213C YNR077CP53758 84 aa3.49□□□□□ -1.85
DOA1YKL213C YJL197C-AP0C5P0 93 aa3.48□□□□□ -1.85
DOA1YKL213C YDL241WQ07738 123 aa3.48□□□□□ -1.85
DOA1YKL213C YDR182W-AQ3E796 67 aa3.48□□□□□ -1.85
DOA1YKL213C YEL067CP39978 195 aa3.47□□□□□ -1.85
DOA1YKL213C SPC1P46965 94 aa3.47□□□□□ -1.85
DOA1YKL213C MGR2Q02889 113 aa3.47□□□□□ -1.85
DOA1YKL213C IRC21Q04772 201 aa3.47□□□□□ -1.85
DOA1YKL213C YCR095W-AQ3E787 52 aa3.47□□□□□ -1.85
DOA1YKL213C COX23P38824 151 aa3.46□□□□□ -1.86
DOA1YKL213C SNA2P56508 79 aa3.46□□□□□ -1.86
DOA1YKL213C PMP3P87284 55 aa3.46□□□□□ -1.86
DOA1YKL213C RTC6O14464 93 aa3.45□□□□□ -1.86
DOA1YKL213C EDC1P53080 175 aaPredicted RBP3.45□□□□□ -1.86
DOA1YKL213C TOS6P48560 102 aa3.44□□□□□ -1.86
DOA1YKL213C YLR194CQ05777 254 aa3.44□□□□□ -1.86
DOA1YKL213C MRX7P53869 86 aa3.43□□□□□ -1.86
DOA1YKL213C YJR146WP47174 117 aa3.43□□□□□ -1.86
DOA1YKL213C YOR008C-AQ3E7B9 74 aa3.43□□□□□ -1.86
DOA1YKL213C YMR122W-AQ3E842 84 aa3.43□□□□□ -1.86
DOA1YKL213C YHR125WP38831 101 aa3.42□□□□□ -1.86
DOA1YKL213C YDR010CQ12426 110 aa3.42□□□□□ -1.86
DOA1YKL213C HMRA2P0CY13 119 aa3.41□□□□□ -1.86
DOA1YKL213C YER078W-AQ3E7A2 54 aa3.41□□□□□ -1.86
DOA1YKL213C RPS30AP0CX33 63 aaKnown RBP3.41□□□□□ -1.86
DOA1YKL213C RPS30BP0CX34 63 aaKnown RBP3.41□□□□□ -1.86
DOA1YKL213C HOT13P36078 116 aa3.41□□□□□ -1.86
DOA1YKL213C YIL156W-BQ2V2P4 73 aa3.41□□□□□ -1.86
DOA1YKL213C NOP10Q6Q547 58 aaPredicted RBP3.41□□□□□ -1.86
DOA1YKL213C BSC4P53841 131 aa3.4□□□□□ -1.86
DOA1YKL213C QCR8P08525 94 aa3.4□□□□□ -1.87
DOA1YKL213C RPL33AP05744 107 aaKnown RBP3.39□□□□□ -1.87
DOA1YKL213C RPL33BP41056 107 aaKnown RBP3.39□□□□□ -1.87
DOA1YKL213C YOL166W-AQ8TGJ1 51 aa3.39□□□□□ -1.87
DOA1YKL213C YLL066W-BQ8TGJ7 56 aa3.39□□□□□ -1.87
DOA1YKL213C YDL022C-AP0C5L6 82 aa3.38□□□□□ -1.87
DOA1YKL213C YEL008WP40001 126 aa3.38□□□□□ -1.87
DOA1YKL213C YPR010C-AA5Z2X5 72 aa3.38□□□□□ -1.87
DOA1YKL213C IGD1P43598 195 aa3.38□□□□□ -1.87
DOA1YKL213C YDR115WQ04598 105 aa3.36□□□□□ -1.87
DOA1YKL213C YBR027CP38220 110 aa3.35□□□□□ -1.87
DOA1YKL213C YBR219CP38317 127 aa3.35□□□□□ -1.87
DOA1YKL213C YJR085CP47131 105 aaKnown RBP3.35□□□□□ -1.87
DOA1YKL213C HUB1Q6Q546 73 aa3.35□□□□□ -1.87
DOA1YKL213C YLR236CA0A023PZG4 107 aa3.35□□□□□ -1.87
DOA1YKL213C YOR034C-AQ3E735 80 aa3.35□□□□□ -1.87
DOA1YKL213C YNL042W-BQ3E7Z2 85 aa3.35□□□□□ -1.87
DOA1YKL213C SHU1P38751 150 aa3.34□□□□□ -1.87
DOA1YKL213C YPR195CQ06594 109 aa3.34□□□□□ -1.88
DOA1YKL213C RPC10P40422 70 aa3.32□□□□□ -1.88
DOA1YKL213C YHR032W-AP0C5N6 59 aa3.31□□□□□ -1.88
DOA1YKL213C YNL190WP53872 204 aa3.31□□□□□ -1.88
DOA1YKL213C ECM19Q06011 112 aa3.31□□□□□ -1.88
DOA1YKL213C ATP17Q06405 101 aa3.31□□□□□ -1.88
DOA1YKL213C YJR107C-AP0CT86 78 aa3.3□□□□□ -1.88
DOA1YKL213C YEL014CP39999 101 aa3.3□□□□□ -1.88
DOA1YKL213C GIS2P53849 153 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88 RIP-Chip
DOA1YKL213C CMC4Q3E7A9 73 aa3.3□□□□□ -1.88
DOA1YKL213C MRPS12P53732 153 aa3.28□□□□□ -1.88
DOA1YKL213C RPL38P49167 78 aaKnown RBP3.28□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms