RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W FAS2P19097 1887 aaKnown RBP1.94□□□□□ -2.1
UBP12YJL197W COX19Q3E731 98 aa1.94□□□□□ -2.1
UBP12YJL197W LAA1P39526 2014 aa1.94□□□□□ -2.1
UBP12YJL197W YDR010CQ12426 110 aa1.93□□□□□ -2.1
UBP12YJL197W PAU23Q07987 124 aa1.93□□□□□ -2.1
UBP12YJL197W PAU17Q12370 124 aa1.93□□□□□ -2.1
UBP12YJL197W YKL065W-AQ2V2P2 73 aa1.92□□□□□ -2.1
UBP12YJL197W YDR119W-AQ2V2P9 66 aa1.92□□□□□ -2.1
UBP12YJL197W YOR314WQ12506 109 aa1.91□□□□□ -2.1
UBP12YJL197W YMR141CP40211 102 aa1.91□□□□□ -2.1
UBP12YJL197W SLH1P53327 1967 aaKnown RBP1.91□□□□□ -2.1
UBP12YJL197W PDX3P38075 228 aaKnown RBP1.9□□□□□ -2.1
UBP12YJL197W YER188C-AP0C0V2 99 aa1.9□□□□□ -2.11
UBP12YJL197W ATX1P38636 73 aa1.9□□□□□ -2.11
UBP12YJL197W HUA1P40325 198 aa1.88□□□□□ -2.11
UBP12YJL197W SWM2P40342 146 aa1.88□□□□□ -2.11
UBP12YJL197W HFA1P32874 2273 aa1.87□□□□□ -2.11
UBP12YJL197W YNL042W-BQ3E7Z2 85 aa1.87□□□□□ -2.11
UBP12YJL197W NOP10Q6Q547 58 aaPredicted RBP1.87□□□□□ -2.11
UBP12YJL197W BRR2P32639 2163 aaKnown RBP1.86□□□□□ -2.11
UBP12YJL197W MLP1Q02455 1875 aaKnown RBP1.85□□□□□ -2.11
UBP12YJL197W QCR9P22289 66 aa1.84□□□□□ -2.11
UBP12YJL197W YAL065CO13511 128 aa1.84□□□□□ -2.11
UBP12YJL197W YBR201C-AQ2V2Q3 67 aa1.84□□□□□ -2.11
UBP12YJL197W Q0032Q9ZZX7 96 aa1.84□□□□□ -2.11
UBP12YJL197W HKR1P41809 1802 aa1.84□□□□□ -2.11
UBP12YJL197W CUP1-1P0CX80 61 aa1.83□□□□□ -2.12
UBP12YJL197W CUP1-2P0CX81 61 aa1.83□□□□□ -2.12
UBP12YJL197W YHR173CP38864 112 aa1.83□□□□□ -2.12
UBP12YJL197W YIL156W-BQ2V2P4 73 aa1.83□□□□□ -2.12
UBP12YJL197W YOR034C-AQ3E735 80 aa1.83□□□□□ -2.12
UBP12YJL197W ECM29P38737 1868 aa1.82□□□□□ -2.12
UBP12YJL197W YBR072C-AQ3E794 53 aa1.82□□□□□ -2.12
UBP12YJL197W YFL041W-AQ3E817 63 aa1.82□□□□□ -2.12
UBP12YJL197W TIM12P32830 109 aa1.81□□□□□ -2.12
UBP12YJL197W YMR122W-AQ3E842 84 aa1.81□□□□□ -2.12
UBP12YJL197W BEM2P39960 2167 aaKnown RBP1.81□□□□□ -2.12
UBP12YJL197W YGR121W-AQ3E816 71 aa1.8□□□□□ -2.12
UBP12YJL197W COX7P10174 60 aa1.79□□□□□ -2.12
UBP12YJL197W SGF11Q03067 99 aa1.79□□□□□ -2.12
UBP12YJL197W NUM1Q00402 2748 aa1.79□□□□□ -2.12
UBP12YJL197W ATP18P81450 59 aa1.79□□□□□ -2.12
UBP12YJL197W SEC16P48415 2195 aaKnown RBP1.78□□□□□ -2.12
UBP12YJL197W RPL43AP0CX25 92 aaKnown RBP1.78□□□□□ -2.12
UBP12YJL197W RPL43BP0CX26 92 aa1.78□□□□□ -2.12
UBP12YJL197W SSS1P35179 80 aa1.78□□□□□ -2.13
UBP12YJL197W PMD1P32634 1753 aa1.77□□□□□ -2.13
UBP12YJL197W RPL38P49167 78 aaKnown RBP1.76□□□□□ -2.13
UBP12YJL197W YOL131WQ08270 108 aa1.75□□□□□ -2.13
UBP12YJL197W YPR117WQ06116 2489 aa1.75□□□□□ -2.13
UBP12YJL197W YFR010W-AP0C5N0 62 aa1.75□□□□□ -2.13
UBP12YJL197W YOL097W-AQ3E7Y9 61 aa1.75□□□□□ -2.13
UBP12YJL197W PAU7P39545 55 aa1.74□□□□□ -2.13
UBP12YJL197W RPL37AP49166 88 aaKnown RBP1.74□□□□□ -2.13
UBP12YJL197W SDH6Q3E785 79 aa1.74□□□□□ -2.13
UBP12YJL197W YGR035W-AQ45U48 73 aa1.74□□□□□ -2.13
UBP12YJL197W FLO1P32768 1537 aa1.74□□□□□ -2.13
UBP12YJL197W RPC10P40422 70 aa1.73□□□□□ -2.13
UBP12YJL197W YDR034W-BQ6Q5X2 51 aa1.73□□□□□ -2.13
UBP12YJL197W YDL022C-AP0C5L6 82 aa1.73□□□□□ -2.13
UBP12YJL197W AUA1P32450 94 aa1.73□□□□□ -2.13
UBP12YJL197W YNL198CP40166 100 aa1.73□□□□□ -2.13
UBP12YJL197W YJR107C-AP0CT86 78 aa1.7□□□□□ -2.14
UBP12YJL197W SPI1P40092 148 aa1.7□□□□□ -2.14
UBP12YJL197W ATP17Q06405 101 aa1.7□□□□□ -2.14
UBP12YJL197W YKL018C-AQ3E7A7 99 aa1.69□□□□□ -2.14
UBP12YJL197W YPR108W-AQ3E7B3 70 aa1.69□□□□□ -2.14
UBP12YJL197W YLR157W-EP0CF00 54 aa1.68□□□□□ -2.14
UBP12YJL197W ERI1P62651 68 aaKnown RBP1.68□□□□□ -2.14
UBP12YJL197W YLR307C-AQ3E825 87 aa1.68□□□□□ -2.14
UBP12YJL197W TOR1P35169 2470 aa1.68□□□□□ -2.14
UBP12YJL197W YSY6P38374 65 aa1.68□□□□□ -2.14
UBP12YJL197W YIL102C-AQ2V2P5 75 aa1.68□□□□□ -2.14
UBP12YJL197W VMA9Q3E7B6 73 aa1.68□□□□□ -2.14
UBP12YJL197W YOR032W-AQ8TGS1 66 aa1.68□□□□□ -2.14
UBP12YJL197W POL2P21951 2222 aaKnown RBP1.67□□□□□ -2.14
UBP12YJL197W MOT1P32333 1867 aa1.65□□□□□ -2.15
UBP12YJL197W TEL1P38110 2787 aa1.65□□□□□ -2.15
UBP12YJL197W URA2P07259 2214 aaKnown RBP1.65□□□□□ -2.15
UBP12YJL197W TOM1Q03280 3268 aa1.64□□□□□ -2.15
UBP12YJL197W YBR032WP38223 100 aa1.64□□□□□ -2.15
UBP12YJL197W YNL190WP53872 204 aa1.64□□□□□ -2.15
UBP12YJL197W YLR146W-AQ2V2P1 62 aa1.63□□□□□ -2.15
UBP12YJL197W YOL164W-AQ3E7A5 60 aa1.63□□□□□ -2.15
UBP12YJL197W HUB1Q6Q546 73 aa1.63□□□□□ -2.15
UBP12YJL197W RPL37BP51402 88 aaKnown RBP1.62□□□□□ -2.15
UBP12YJL197W YIL134C-AQ45U18 67 aa1.61□□□□□ -2.15
UBP12YJL197W YDR246W-AQ3E763 66 aa1.58□□□□□ -2.16
UBP12YJL197W YDR182W-AQ3E796 67 aa1.58□□□□□ -2.16
UBP12YJL197W BPH1P25356 2167 aa1.58□□□□□ -2.16
UBP12YJL197W RPS30AP0CX33 63 aaKnown RBP1.56□□□□□ -2.16
UBP12YJL197W RPS30BP0CX34 63 aaKnown RBP1.56□□□□□ -2.16
UBP12YJL197W EDC1P53080 175 aaPredicted RBP1.56□□□□□ -2.16
UBP12YJL197W STT4P37297 1900 aa1.56□□□□□ -2.16
UBP12YJL197W BLM10P43583 2143 aa1.55□□□□□ -2.16
UBP12YJL197W YBL039W-BP0C268 59 aa1.52□□□□□ -2.17
UBP12YJL197W TAO3P40468 2376 aa1.52□□□□□ -2.17
UBP12YJL197W GCN1P33892 2672 aaKnown RBP1.51□□□□□ -2.17
UBP12YJL197W OLI1P61829 76 aa1.51□□□□□ -2.17
UBP12YJL197W YFR009W-AP0C5M9 85 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms