RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W YJL127C-BQ3E828 52 aa3.46□□□□□ -1.86
PRE3YJL001W BSC4P53841 131 aa3.45□□□□□ -1.86
PRE3YJL001W ICY1Q04329 127 aa3.45□□□□□ -1.86
PRE3YJL001W ISD11Q6Q560 94 aa3.45□□□□□ -1.86
PRE3YJL001W YBR027CP38220 110 aa3.44□□□□□ -1.86
PRE3YJL001W NAT5Q08689 176 aa3.44□□□□□ -1.86
PRE3YJL001W YOR034C-AQ3E735 80 aa3.43□□□□□ -1.86
PRE3YJL001W FYV5P25585 152 aa3.42□□□□□ -1.86
PRE3YJL001W YHR007C-AQ07074 71 aa3.42□□□□□ -1.86
PRE3YJL001W YLR236CA0A023PZG4 107 aa3.41□□□□□ -1.86
PRE3YJL001W FUN14P18411 198 aa3.41□□□□□ -1.86
PRE3YJL001W YHL018WP38744 120 aaPredicted RBP3.41□□□□□ -1.86
PRE3YJL001W FYV7Q12247 151 aa3.41□□□□□ -1.86
PRE3YJL001W YHR130CP38834 111 aa3.4□□□□□ -1.87
PRE3YJL001W YOR072WQ08486 104 aa3.4□□□□□ -1.87
PRE3YJL001W ELC1Q03071 99 aa3.39□□□□□ -1.87
PRE3YJL001W YHL005CP38752 130 aa3.38□□□□□ -1.87
PRE3YJL001W YNL122CP53921 115 aaPredicted RBP3.38□□□□□ -1.87
PRE3YJL001W BET1P22804 142 aa3.37□□□□□ -1.87
PRE3YJL001W MSA2P36157 363 aa3.36□□□□□ -1.87
PRE3YJL001W MPC3P53311 146 aa3.36□□□□□ -1.87
PRE3YJL001W PAU23Q07987 124 aa3.36□□□□□ -1.87
PRE3YJL001W RPL36BO14455 100 aaKnown RBP3.35□□□□□ -1.87
PRE3YJL001W YHR139C-AO13536 103 aa3.34□□□□□ -1.87
PRE3YJL001W HUR1P45820 110 aa3.34□□□□□ -1.87
PRE3YJL001W YNL184CP53876 108 aa3.34□□□□□ -1.87
PRE3YJL001W YER181CP40097 107 aa3.33□□□□□ -1.88
PRE3YJL001W SFT1P43682 97 aa3.33□□□□□ -1.88
PRE3YJL001W NHP2P32495 156 aaPredicted RBP3.32□□□□□ -1.88
PRE3YJL001W YLR363W-AQ3E747 85 aa3.32□□□□□ -1.88
PRE3YJL001W PAI3P01094 68 aa3.31□□□□□ -1.88
PRE3YJL001W LSM6Q06406 86 aaKnown RBP3.31□□□□□ -1.88
PRE3YJL001W YDL085C-AQ3E7B7 68 aaKnown RBP3.31□□□□□ -1.88
PRE3YJL001W COX7P10174 60 aa3.3□□□□□ -1.88
PRE3YJL001W POP7P38291 140 aa3.3□□□□□ -1.88
PRE3YJL001W SAE3P89114 91 aa3.3□□□□□ -1.88
PRE3YJL001W OST2P46964 130 aa3.29□□□□□ -1.88
PRE3YJL001W RSM18P40033 138 aa3.28□□□□□ -1.88
PRE3YJL001W LSM8P47093 109 aaKnown RBP3.28□□□□□ -1.88
PRE3YJL001W YLR296WQ05898 108 aa3.28□□□□□ -1.88
PRE3YJL001W LSO2Q3E772 92 aaKnown RBP3.28□□□□□ -1.88
PRE3YJL001W DSE2P38844 325 aa3.27□□□□□ -1.89
PRE3YJL001W TDA8Q6B2U8 126 aa3.26□□□□□ -1.89
PRE3YJL001W YPR170W-BP0C5R9 85 aa3.25□□□□□ -1.89
PRE3YJL001W YHR125WP38831 101 aa3.24□□□□□ -1.89
PRE3YJL001W YJL144WP47009 104 aa3.24□□□□□ -1.89
PRE3YJL001W CWC27Q02770 301 aa3.24□□□□□ -1.89
PRE3YJL001W YHR032W-AP0C5N6 59 aa3.23□□□□□ -1.89
PRE3YJL001W YJR107C-AP0CT86 78 aa3.23□□□□□ -1.89
PRE3YJL001W RSM19P53733 91 aaPredicted RBP3.23□□□□□ -1.89
PRE3YJL001W TSC3Q3E790 80 aa3.23□□□□□ -1.89
PRE3YJL001W YFR009W-AP0C5M9 85 aa3.22□□□□□ -1.89
PRE3YJL001W YLR157W-DP0CE99 70 aa3.22□□□□□ -1.89
PRE3YJL001W YOL097W-AQ3E7Y9 61 aa3.22□□□□□ -1.89
PRE3YJL001W ATP18P81450 59 aa3.21□□□□□ -1.9
PRE3YJL001W YIL102C-AQ2V2P5 75 aa3.21□□□□□ -1.9
PRE3YJL001W YHR213W-BQ8TGK1 99 aa3.21□□□□□ -1.9
PRE3YJL001W GLC8P41818 229 aa3.2□□□□□ -1.9
PRE3YJL001W YLR162WQ06235 118 aa3.2□□□□□ -1.9
PRE3YJL001W FYV12Q08559 129 aa3.19□□□□□ -1.9
PRE3YJL001W MIC10Q96VH5 97 aa3.19□□□□□ -1.9
PRE3YJL001W YNL198CP40166 100 aa3.18□□□□□ -1.9
PRE3YJL001W YJL133C-AQ3E7A3 74 aa3.18□□□□□ -1.9
PRE3YJL001W ICS3P47034 131 aa3.17□□□□□ -1.9
PRE3YJL001W Q0017Q9ZZX8 53 aa3.17□□□□□ -1.9
PRE3YJL001W YJR128WP47162 119 aa3.14□□□□□ -1.91
PRE3YJL001W SHH4Q06236 168 aa3.14□□□□□ -1.91
PRE3YJL001W YDR210WQ03482 75 aa3.13□□□□□ -1.91
PRE3YJL001W YFR032C-BQ8TGU2 87 aa3.13□□□□□ -1.91
PRE3YJL001W COX23P38824 151 aa3.12□□□□□ -1.91
PRE3YJL001W YDR381C-AQ3E6R5 114 aa3.12□□□□□ -1.91
PRE3YJL001W EDC1P53080 175 aaPredicted RBP3.11□□□□□ -1.91
PRE3YJL001W YOL014WQ08110 124 aa3.11□□□□□ -1.91
PRE3YJL001W COF1Q03048 143 aaKnown RBP3.09□□□□□ -1.91
PRE3YJL001W YHR073W-AP0C5N7 58 aa3.07□□□□□ -1.92
PRE3YJL001W YJL009WP47078 108 aa3.07□□□□□ -1.92
PRE3YJL001W RPL38P49167 78 aaKnown RBP3.07□□□□□ -1.92
PRE3YJL001W PBI2P0CT04 75 aaKnown RBP3.06□□□□□ -1.92
PRE3YJL001W TDA2P40045 126 aa3.06□□□□□ -1.92
PRE3YJL001W YER187WP40102 141 aa3.06□□□□□ -1.92
PRE3YJL001W YLR361C-AQ3E795 98 aa3.06□□□□□ -1.92
PRE3YJL001W RPA12P32529 125 aaKnown RBP3.04□□□□□ -1.92
PRE3YJL001W YHL042WP38729 150 aa3.03□□□□□ -1.92
PRE3YJL001W RPL36AP05745 100 aaPredicted RBP3.02□□□□□ -1.93
PRE3YJL001W YAR064WP39563 99 aa3.02□□□□□ -1.93
PRE3YJL001W EMC6Q12431 108 aa3.02□□□□□ -1.93
PRE3YJL001W YOR304C-AO14468 76 aa3.01□□□□□ -1.93
PRE3YJL001W YCR050CP25630 102 aa3.01□□□□□ -1.93
PRE3YJL001W YGR164WP53291 111 aa3□□□□□ -1.93
PRE3YJL001W ATP20Q12233 115 aa3□□□□□ -1.93
PRE3YJL001W RAD6P06104 172 aa2.99□□□□□ -1.93
PRE3YJL001W SKI6P46948 246 aaPredicted RBP2.99□□□□□ -1.93
PRE3YJL001W YOR316C-AQ3E806 69 aa2.99□□□□□ -1.93
PRE3YJL001W RPS29AP41057 56 aaKnown RBP2.97□□□□□ -1.93
PRE3YJL001W YPR153WQ06537 140 aa2.97□□□□□ -1.93
PRE3YJL001W YCR085WP25650 117 aa2.96□□□□□ -1.94
PRE3YJL001W YML100W-AQ8TGT0 57 aa2.96□□□□□ -1.94
PRE3YJL001W RPS29BP41058 56 aaKnown RBP2.94□□□□□ -1.94
PRE3YJL001W ATX1P38636 73 aa2.9□□□□□ -1.95
PRE3YJL001W YLR285C-AQ3E771 56 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms