RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W SOH1P38633 127 aa7.51□□□□□ -1.21
SIM1YIL123W YIL002W-AQ3E7Z5 69 aa7.51□□□□□ -1.21
SIM1YIL123W YFL041W-AQ3E817 63 aa7.51□□□□□ -1.21
SIM1YIL123W YLR156WP0CE96 114 aa7.5□□□□□ -1.21
SIM1YIL123W YLR159WP0CE97 114 aa7.5□□□□□ -1.21
SIM1YIL123W YLR161WP0CE98 114 aa7.5□□□□□ -1.21
SIM1YIL123W BET1P22804 142 aa7.5□□□□□ -1.21
SIM1YIL123W YER039C-AP0CD97 72 aa7.49□□□□□ -1.21
SIM1YIL123W KRE1P17260 313 aa7.48□□□□□ -1.21
SIM1YIL123W YAR1P46683 200 aa7.47□□□□□ -1.21
SIM1YIL123W DDR2P89113 61 aa7.47□□□□□ -1.21
SIM1YIL123W YHR139C-AO13536 103 aa7.46□□□□□ -1.21
SIM1YIL123W RSM19P53733 91 aaPredicted RBP7.46□□□□□ -1.21
SIM1YIL123W RAD6P06104 172 aa7.44□□□□□ -1.22
SIM1YIL123W GIS2P53849 153 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
SIM1YIL123W LCL2Q08045 131 aa7.43□□□□□ -1.22
SIM1YIL123W EMC6Q12431 108 aa7.43□□□□□ -1.22
SIM1YIL123W EDC1P53080 175 aaPredicted RBP7.42□□□□□ -1.22
SIM1YIL123W RPL36BO14455 100 aaKnown RBP7.41□□□□□ -1.22
SIM1YIL123W BSC4P53841 131 aa7.41□□□□□ -1.22
SIM1YIL123W ICS3P47034 131 aa7.39□□□□□ -1.23
SIM1YIL123W YHR007C-AQ07074 71 aa7.39□□□□□ -1.23
SIM1YIL123W YOR072WQ08486 104 aa7.39□□□□□ -1.23
SIM1YIL123W YHL042WP38729 150 aa7.38□□□□□ -1.23
SIM1YIL123W SHH4Q06236 168 aa7.36□□□□□ -1.23
SIM1YIL123W LCL1Q02786 101 aa7.35□□□□□ -1.23
SIM1YIL123W YGR121W-AQ3E816 71 aa7.35□□□□□ -1.23
SIM1YIL123W YHR213W-BQ8TGK1 99 aa7.35□□□□□ -1.23
SIM1YIL123W EDC2P40023 145 aaPredicted RBP7.35□□□□□ -1.23
SIM1YIL123W TDA2P40045 126 aa7.35□□□□□ -1.23
SIM1YIL123W RPL38P49167 78 aaKnown RBP7.35□□□□□ -1.23
SIM1YIL123W TDA8Q6B2U8 126 aa7.35□□□□□ -1.23
SIM1YIL123W COX23P38824 151 aa7.34□□□□□ -1.23
SIM1YIL123W YSY6P38374 65 aa7.33□□□□□ -1.24
SIM1YIL123W RSM18P40033 138 aa7.32□□□□□ -1.24
SIM1YIL123W YLR285C-AQ3E771 56 aa7.31□□□□□ -1.24
SIM1YIL123W YJL133C-AQ3E7A3 74 aa7.3□□□□□ -1.24
SIM1YIL123W SPG1P50088 95 aa7.29□□□□□ -1.24
SIM1YIL123W RPP2AP05319 106 aaKnown RBP7.27□□□□□ -1.24
SIM1YIL123W ECM19Q06011 112 aa7.27□□□□□ -1.24
SIM1YIL123W YOL014WQ08110 124 aa7.27□□□□□ -1.24
SIM1YIL123W ATP20Q12233 115 aa7.27□□□□□ -1.24
SIM1YIL123W YLR415CO13578 112 aa7.27□□□□□ -1.25
SIM1YIL123W COF1Q03048 143 aaKnown RBP7.27□□□□□ -1.25
SIM1YIL123W YDR119W-AQ2V2P9 66 aa7.27□□□□□ -1.25
SIM1YIL123W YJR085CP47131 105 aaKnown RBP7.25□□□□□ -1.25
SIM1YIL123W YGR039WP53225 103 aa7.25□□□□□ -1.25
SIM1YIL123W YLR162WQ06235 118 aa7.25□□□□□ -1.25
SIM1YIL123W MMS2P53152 137 aa7.24□□□□□ -1.25
SIM1YIL123W YNL184CP53876 108 aa7.24□□□□□ -1.25
SIM1YIL123W YMR230W-AQ3E7B5 62 aa7.24□□□□□ -1.25
SIM1YIL123W YJL197C-AP0C5P0 93 aa7.22□□□□□ -1.25
SIM1YIL123W YEL045CP32616 141 aa7.22□□□□□ -1.25
SIM1YIL123W MIC10Q96VH5 97 aa7.22□□□□□ -1.25
SIM1YIL123W YBL112CQ3E7Y4 105 aa7.21□□□□□ -1.25
SIM1YIL123W YCR050CP25630 102 aa7.2□□□□□ -1.26
SIM1YIL123W YHL018WP38744 120 aaPredicted RBP7.2□□□□□ -1.26
SIM1YIL123W YPL038W-AQ3E7B4 63 aa7.2□□□□□ -1.26
SIM1YIL123W YKL183C-AQ3E765 70 aa7.19□□□□□ -1.26
SIM1YIL123W YBR027CP38220 110 aa7.18□□□□□ -1.26
SIM1YIL123W YOR268CQ08734 132 aa7.15□□□□□ -1.27
SIM1YIL123W YBR182C-AQ8TGU6 64 aa7.15□□□□□ -1.27
SIM1YIL123W YOR304C-AO14468 76 aa7.1□□□□□ -1.27
SIM1YIL123W HOT13P36078 116 aa7.1□□□□□ -1.27
SIM1YIL123W YGL149WP53116 101 aa7.1□□□□□ -1.27
SIM1YIL123W YOL097W-AQ3E7Y9 61 aa7.09□□□□□ -1.28
SIM1YIL123W YLR157W-DP0CE99 70 aa7.08□□□□□ -1.28
SIM1YIL123W DDR48P18899 430 aaKnown RBP7.08□□□□□ -1.28
SIM1YIL123W YOR314WQ12506 109 aa7.08□□□□□ -1.28
SIM1YIL123W YDR246W-AQ3E763 66 aa7.05□□□□□ -1.28
SIM1YIL123W TOM6P33448 61 aa7.03□□□□□ -1.28
SIM1YIL123W YCR043CP25361 127 aa7.02□□□□□ -1.29
SIM1YIL123W NOP10Q6Q547 58 aaPredicted RBP7.02□□□□□ -1.29
SIM1YIL123W YER187WP40102 141 aa7.01□□□□□ -1.29
SIM1YIL123W YAR064WP39563 99 aa7.01□□□□□ -1.29
SIM1YIL123W MDN1Q12019 4910 aaKnown RBP7□□□□□ -1.29
SIM1YIL123W RPL36AP05745 100 aaPredicted RBP6.97□□□□□ -1.29
SIM1YIL123W YPL080CQ02826 108 aa6.97□□□□□ -1.29
SIM1YIL123W AIM4P38305 123 aaPredicted RBP6.96□□□□□ -1.3
SIM1YIL123W KSH1Q8TGJ3 72 aa6.93□□□□□ -1.3
SIM1YIL123W YOL013W-AP0C272 63 aaPredicted RBP6.92□□□□□ -1.3
SIM1YIL123W LIP1Q03579 150 aa6.92□□□□□ -1.3
SIM1YIL123W YDR182W-AQ3E796 67 aa6.92□□□□□ -1.3
SIM1YIL123W YOL166W-AQ8TGJ1 51 aa6.91□□□□□ -1.3
SIM1YIL123W KTI11Q3E840 82 aa6.9□□□□□ -1.31
SIM1YIL123W YIL102CP40488 101 aa6.89□□□□□ -1.31
SIM1YIL123W YDL012CQ12489 107 aa6.89□□□□□ -1.31
SIM1YIL123W YFL067WP43537 175 aa6.88□□□□□ -1.31
SIM1YIL123W YHL005CP38752 130 aa6.86□□□□□ -1.31
SIM1YIL123W YPR153WQ06537 140 aa6.86□□□□□ -1.31
SIM1YIL123W YDR010CQ12426 110 aa6.85□□□□□ -1.31
SIM1YIL123W YHR073W-AP0C5N7 58 aa6.83□□□□□ -1.32
SIM1YIL123W SAP30P38429 201 aa6.8□□□□□ -1.32
SIM1YIL123W YIR021W-AQ3E739 70 aa6.78□□□□□ -1.32
SIM1YIL123W YLR361C-AQ3E795 98 aa6.76□□□□□ -1.33
SIM1YIL123W YKL069WP36088 180 aa6.74□□□□□ -1.33
SIM1YIL123W COX7P10174 60 aa6.72□□□□□ -1.33
SIM1YIL123W YHR125WP38831 101 aa6.72□□□□□ -1.33
SIM1YIL123W RPS30AP0CX33 63 aaKnown RBP6.69□□□□□ -1.34
SIM1YIL123W RPS30BP0CX34 63 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms