RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W MPC3P53311 146 aa6.17□□□□□ -1.42
UBA4YHR111W MSA2P36157 363 aa6.16□□□□□ -1.42
UBA4YHR111W POP7P38291 140 aa6.16□□□□□ -1.42
UBA4YHR111W HUR1P45820 110 aa6.16□□□□□ -1.42
UBA4YHR111W LSM6Q06406 86 aaKnown RBP6.15□□□□□ -1.43
UBA4YHR111W RPL36BO14455 100 aaKnown RBP6.14□□□□□ -1.43
UBA4YHR111W YBR027CP38220 110 aa6.14□□□□□ -1.43
UBA4YHR111W SFT1P43682 97 aa6.14□□□□□ -1.43
UBA4YHR111W HOT13P36078 116 aa6.13□□□□□ -1.43
UBA4YHR111W YLR296WQ05898 108 aa6.13□□□□□ -1.43
UBA4YHR111W YHR139C-AO13536 103 aa6.12□□□□□ -1.43
UBA4YHR111W CMC4Q3E7A9 73 aa6.12□□□□□ -1.43
UBA4YHR111W YNL184CP53876 108 aa6.07□□□□□ -1.44
UBA4YHR111W OST2P46964 130 aa6.06□□□□□ -1.44
UBA4YHR111W CWC27Q02770 301 aa6.06□□□□□ -1.44
UBA4YHR111W GLC8P41818 229 aa6.05□□□□□ -1.44
UBA4YHR111W RSM18P40033 138 aa6.01□□□□□ -1.45
UBA4YHR111W YAR1P46683 200 aa6.01□□□□□ -1.45
UBA4YHR111W YIL102C-AQ2V2P5 75 aa6.01□□□□□ -1.45
UBA4YHR111W YAL063C-AQ3E791 96 aa6.01□□□□□ -1.45
UBA4YHR111W DSE2P38844 325 aa6□□□□□ -1.45
UBA4YHR111W TSC3Q3E790 80 aa6□□□□□ -1.45
UBA4YHR111W YJR107C-AP0CT86 78 aa5.99□□□□□ -1.45
UBA4YHR111W YHL018WP38744 120 aaPredicted RBP5.99□□□□□ -1.45
UBA4YHR111W YHL005CP38752 130 aa5.99□□□□□ -1.45
UBA4YHR111W TDA8Q6B2U8 126 aa5.99□□□□□ -1.45
UBA4YHR111W YNL198CP40166 100 aa5.94□□□□□ -1.46
UBA4YHR111W ATP18P81450 59 aa5.94□□□□□ -1.46
UBA4YHR111W YBR182C-AQ8TGU6 64 aa5.94□□□□□ -1.46
UBA4YHR111W YLR157W-DP0CE99 70 aa5.93□□□□□ -1.46
UBA4YHR111W UIP3P39547 235 aa5.93□□□□□ -1.46
UBA4YHR111W RSM19P53733 91 aaPredicted RBP5.93□□□□□ -1.46
UBA4YHR111W YFR009W-AP0C5M9 85 aa5.92□□□□□ -1.46
UBA4YHR111W YPR170W-BP0C5R9 85 aa5.9□□□□□ -1.47
UBA4YHR111W YOL097W-AQ3E7Y9 61 aa5.9□□□□□ -1.47
UBA4YHR111W YHR213W-BQ8TGK1 99 aa5.9□□□□□ -1.47
UBA4YHR111W YLR162WQ06235 118 aa5.88□□□□□ -1.47
UBA4YHR111W YEL045CP32616 141 aa5.87□□□□□ -1.47
UBA4YHR111W YJL133C-AQ3E7A3 74 aa5.87□□□□□ -1.47
UBA4YHR111W COX7P10174 60 aa5.86□□□□□ -1.47
UBA4YHR111W ICS3P47034 131 aa5.86□□□□□ -1.47
UBA4YHR111W YNL122CP53921 115 aaPredicted RBP5.86□□□□□ -1.47
UBA4YHR111W MIC10Q96VH5 97 aa5.86□□□□□ -1.47
UBA4YHR111W ECM19Q06011 112 aa5.85□□□□□ -1.47
UBA4YHR111W RPL37BP51402 88 aaKnown RBP5.82□□□□□ -1.48
UBA4YHR111W SHH4Q06236 168 aa5.81□□□□□ -1.48
UBA4YHR111W COX23P38824 151 aa5.78□□□□□ -1.48
UBA4YHR111W YDR381C-AQ3E6R5 114 aa5.78□□□□□ -1.48
UBA4YHR111W ISD11Q6Q560 94 aa5.74□□□□□ -1.49
UBA4YHR111W YCR043CP25361 127 aa5.74□□□□□ -1.49
UBA4YHR111W EDC1P53080 175 aaPredicted RBP5.74□□□□□ -1.49
UBA4YHR111W YOL014WQ08110 124 aa5.74□□□□□ -1.49
UBA4YHR111W LSO2Q3E772 92 aaKnown RBP5.73□□□□□ -1.49
UBA4YHR111W PBI2P0CT04 75 aaKnown RBP5.72□□□□□ -1.49
UBA4YHR111W COF1Q03048 143 aaKnown RBP5.72□□□□□ -1.49
UBA4YHR111W RPA12P32529 125 aaKnown RBP5.71□□□□□ -1.5
UBA4YHR111W RPL38P49167 78 aaKnown RBP5.71□□□□□ -1.5
UBA4YHR111W TDA2P40045 126 aa5.7□□□□□ -1.5
UBA4YHR111W YIL002W-AQ3E7Z5 69 aa5.66□□□□□ -1.5
UBA4YHR111W YHL042WP38729 150 aa5.64□□□□□ -1.51
UBA4YHR111W YHR073W-AP0C5N7 58 aa5.62□□□□□ -1.51
UBA4YHR111W YER187WP40102 141 aa5.62□□□□□ -1.51
UBA4YHR111W YOR304C-AO14468 76 aa5.6□□□□□ -1.51
UBA4YHR111W YLR361C-AQ3E795 98 aa5.6□□□□□ -1.51
UBA4YHR111W YCR050CP25630 102 aa5.59□□□□□ -1.51
UBA4YHR111W ATP20Q12233 115 aa5.59□□□□□ -1.51
UBA4YHR111W RPL36AP05745 100 aaPredicted RBP5.58□□□□□ -1.52
UBA4YHR111W YCR085WP25650 117 aa5.58□□□□□ -1.52
UBA4YHR111W YDL012CQ12489 107 aa5.58□□□□□ -1.52
UBA4YHR111W RAD6P06104 172 aa5.57□□□□□ -1.52
UBA4YHR111W YAR064WP39563 99 aa5.57□□□□□ -1.52
UBA4YHR111W RPP2AP05319 106 aaKnown RBP5.56□□□□□ -1.52
UBA4YHR111W SKI6P46948 246 aaPredicted RBP5.51□□□□□ -1.53
UBA4YHR111W ATX1P38636 73 aa5.49□□□□□ -1.53
UBA4YHR111W YGR164WP53291 111 aa5.49□□□□□ -1.53
UBA4YHR111W FYV12Q08559 129 aa5.49□□□□□ -1.53
UBA4YHR111W YOR316C-AQ3E806 69 aa5.48□□□□□ -1.53
UBA4YHR111W Q0017Q9ZZX8 53 aa5.48□□□□□ -1.53
UBA4YHR111W EMC6Q12431 108 aa5.46□□□□□ -1.54
UBA4YHR111W YER175W-AQ8TGU4 54 aa5.45□□□□□ -1.54
UBA4YHR111W INO4P13902 151 aa5.44□□□□□ -1.54
UBA4YHR111W YPL080CQ02826 108 aa5.44□□□□□ -1.54
UBA4YHR111W YPR153WQ06537 140 aa5.44□□□□□ -1.54
UBA4YHR111W YJR128WP47162 119 aa5.43□□□□□ -1.54
UBA4YHR111W YLR285C-AQ3E771 56 aa5.43□□□□□ -1.54
UBA4YHR111W YSY6P38374 65 aa5.37□□□□□ -1.55
UBA4YHR111W YJL144WP47009 104 aa5.37□□□□□ -1.55
UBA4YHR111W YJL009WP47078 108 aa5.33□□□□□ -1.56
UBA4YHR111W HHF1P02309 103 aaKnown RBP5.32□□□□□ -1.56
UBA4YHR111W LIP1Q03579 150 aa5.31□□□□□ -1.56
UBA4YHR111W YGR039WP53225 103 aa5.3□□□□□ -1.56
UBA4YHR111W YKL183C-AQ3E765 70 aa5.3□□□□□ -1.56
UBA4YHR111W YFL041W-AQ3E817 63 aa5.3□□□□□ -1.56
UBA4YHR111W YDR210WQ03482 75 aa5.28□□□□□ -1.56
UBA4YHR111W YOL013W-AP0C272 63 aaPredicted RBP5.26□□□□□ -1.57
UBA4YHR111W YGL034CP53186 121 aa5.24□□□□□ -1.57
UBA4YHR111W YIL102CP40488 101 aa5.23□□□□□ -1.57
UBA4YHR111W YOR314WQ12506 109 aa5.21□□□□□ -1.58
UBA4YHR111W SLO1Q3E784 85 aa5.21□□□□□ -1.58
UBA4YHR111W YGR146C-AQ8TGT9 53 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms