RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W IMP2P46972 177 aa1.93□□□□□ -2.1
TRA1YHR099W YPL278CQ08990 100 aa1.93□□□□□ -2.1
TRA1YHR099W HFA1P32874 2273 aa1.93□□□□□ -2.1
TRA1YHR099W TOS6P48560 102 aa1.92□□□□□ -2.1
TRA1YHR099W TMA10Q06177 86 aa1.92□□□□□ -2.1
TRA1YHR099W TOM7P53507 60 aa1.92□□□□□ -2.1
TRA1YHR099W YPR015CQ12531 247 aa1.92□□□□□ -2.1
TRA1YHR099W RPB9P27999 122 aa1.92□□□□□ -2.1
TRA1YHR099W YOR029WQ12243 111 aa1.92□□□□□ -2.1
TRA1YHR099W YPL080CQ02826 108 aa1.92□□□□□ -2.1
TRA1YHR099W YJL133C-AQ3E7A3 74 aa1.92□□□□□ -2.1
TRA1YHR099W YEL008WP40001 126 aa1.91□□□□□ -2.1
TRA1YHR099W YMR122W-AQ3E842 84 aa1.91□□□□□ -2.1
TRA1YHR099W YFR032C-BQ8TGU2 87 aa1.91□□□□□ -2.1
TRA1YHR099W RPR2P40571 144 aa1.91□□□□□ -2.1
TRA1YHR099W YIL014C-AQ02598 104 aa1.91□□□□□ -2.1
TRA1YHR099W YBR072C-AQ3E794 53 aa1.91□□□□□ -2.1
TRA1YHR099W PGU1P47180 361 aa1.91□□□□□ -2.1
TRA1YHR099W ATP17Q06405 101 aa1.91□□□□□ -2.1
TRA1YHR099W YNL208WP40159 199 aaKnown RBP1.9□□□□□ -2.1
TRA1YHR099W SEN1Q00416 2231 aaKnown RBP1.9□□□□□ -2.1
TRA1YHR099W MIX17Q03667 156 aa1.9□□□□□ -2.11
TRA1YHR099W LCL2Q08045 131 aa1.9□□□□□ -2.11
TRA1YHR099W YDR381C-AQ3E6R5 114 aa1.9□□□□□ -2.11
TRA1YHR099W MRP10O75012 95 aa1.9□□□□□ -2.11
TRA1YHR099W ATP15P21306 62 aa1.9□□□□□ -2.11
TRA1YHR099W MBF1O14467 151 aaKnown RBP1.9□□□□□ -2.11
TRA1YHR099W YPR153WQ06537 140 aa1.9□□□□□ -2.11
TRA1YHR099W YLR307C-AQ3E825 87 aa1.9□□□□□ -2.11
TRA1YHR099W HHY1P39982 102 aa1.89□□□□□ -2.11
TRA1YHR099W YPR117WQ06116 2489 aa1.89□□□□□ -2.11
TRA1YHR099W FYV12Q08559 129 aa1.89□□□□□ -2.11
TRA1YHR099W YDR182W-AQ3E796 67 aa1.89□□□□□ -2.11
TRA1YHR099W HUG1Q6Q5K6 68 aa1.89□□□□□ -2.11
TRA1YHR099W DAT1P13483 248 aaKnown RBP1.89□□□□□ -2.11
TRA1YHR099W YJL197C-AP0C5P0 93 aa1.88□□□□□ -2.11
TRA1YHR099W YEL067CP39978 195 aa1.88□□□□□ -2.11
TRA1YHR099W YCL048W-AQ2V2Q2 79 aa1.88□□□□□ -2.11
TRA1YHR099W BPH1P25356 2167 aa1.88□□□□□ -2.11
TRA1YHR099W TAO3P40468 2376 aa1.88□□□□□ -2.11
TRA1YHR099W YGL260WP53056 76 aa1.88□□□□□ -2.11
TRA1YHR099W YNL190WP53872 204 aa1.88□□□□□ -2.11
TRA1YHR099W YLL006W-AQ3E814 58 aa1.88□□□□□ -2.11
TRA1YHR099W YCR025CP25352 136 aa1.88□□□□□ -2.11
TRA1YHR099W YDR010CQ12426 110 aa1.88□□□□□ -2.11
TRA1YHR099W GCN1P33892 2672 aaKnown RBP1.88□□□□□ -2.11
TRA1YHR099W MRPS12P53732 153 aa1.87□□□□□ -2.11
TRA1YHR099W YFR009W-AP0C5M9 85 aa1.87□□□□□ -2.11
TRA1YHR099W Q0142Q9ZZW4 58 aa1.87□□□□□ -2.11
TRA1YHR099W YNL146C-AQ3E7Z1 64 aa1.87□□□□□ -2.11
TRA1YHR099W URA2P07259 2214 aaKnown RBP1.87□□□□□ -2.11
TRA1YHR099W GLT1Q12680 2145 aaKnown RBP1.87□□□□□ -2.11
TRA1YHR099W TAR1Q8TGM6 124 aa1.87□□□□□ -2.11
TRA1YHR099W YAL064WP39711 94 aa1.86□□□□□ -2.11
TRA1YHR099W SOM1Q05676 74 aa1.86□□□□□ -2.11
TRA1YHR099W YHR213W-BQ8TGK1 99 aa1.86□□□□□ -2.11
TRA1YHR099W YAL065CO13511 128 aa1.86□□□□□ -2.11
TRA1YHR099W RGM1Q00453 211 aa1.86□□□□□ -2.11
TRA1YHR099W RPL43AP0CX25 92 aaKnown RBP1.85□□□□□ -2.11
TRA1YHR099W RPL43BP0CX26 92 aa1.85□□□□□ -2.11
TRA1YHR099W YNL198CP40166 100 aa1.85□□□□□ -2.11
TRA1YHR099W RPC10P40422 70 aa1.85□□□□□ -2.11
TRA1YHR099W ACC1Q00955 2233 aaKnown RBP1.85□□□□□ -2.11
TRA1YHR099W RPL39P04650 51 aa1.85□□□□□ -2.11
TRA1YHR099W YGL193CP53097 103 aa1.85□□□□□ -2.11
TRA1YHR099W YDR274CP87283 123 aa1.85□□□□□ -2.11
TRA1YHR099W FAB1P34756 2278 aa1.84□□□□□ -2.11
TRA1YHR099W YGR121W-AQ3E816 71 aa1.84□□□□□ -2.11
TRA1YHR099W YML122CQ03207 126 aa1.84□□□□□ -2.11
TRA1YHR099W COX23P38824 151 aa1.84□□□□□ -2.12
TRA1YHR099W YAR064WP39563 99 aa1.84□□□□□ -2.12
TRA1YHR099W QCR10P37299 77 aa1.84□□□□□ -2.12
TRA1YHR099W YIL086CP40503 102 aa1.83□□□□□ -2.12
TRA1YHR099W YAL067W-AQ8TGK6 75 aa1.83□□□□□ -2.12
TRA1YHR099W YGR018CP53211 109 aa1.83□□□□□ -2.12
TRA1YHR099W RPS27AP35997 82 aaKnown RBP1.83□□□□□ -2.12
TRA1YHR099W RPS27BP38711 82 aa1.83□□□□□ -2.12
TRA1YHR099W NAG1Q8TGN9 163 aa1.83□□□□□ -2.12
TRA1YHR099W YBL081WP38180 368 aaKnown RBP1.83□□□□□ -2.12
TRA1YHR099W YBR027CP38220 110 aa1.83□□□□□ -2.12
TRA1YHR099W YJL027CP47063 138 aaPredicted RBP1.82□□□□□ -2.12
TRA1YHR099W YER084WP40057 128 aa1.82□□□□□ -2.12
TRA1YHR099W YMR122CQ03879 124 aa1.82□□□□□ -2.12
TRA1YHR099W RPL29P05747 59 aaPredicted RBP1.82□□□□□ -2.12
TRA1YHR099W YHL037CP38733 133 aa1.82□□□□□ -2.12
TRA1YHR099W YJR085CP47131 105 aaKnown RBP1.82□□□□□ -2.12
TRA1YHR099W YOR316C-AQ3E806 69 aa1.82□□□□□ -2.12
TRA1YHR099W SED1Q01589 338 aa1.82□□□□□ -2.12
TRA1YHR099W YFL067WP43537 175 aa1.81□□□□□ -2.12
TRA1YHR099W YHR032W-AP0C5N6 59 aa1.8□□□□□ -2.12
TRA1YHR099W YKL097CP34245 136 aa1.8□□□□□ -2.12
TRA1YHR099W EDC1P53080 175 aaPredicted RBP1.79□□□□□ -2.12
TRA1YHR099W YHR125WP38831 101 aa1.79□□□□□ -2.12
TRA1YHR099W RPS30AP0CX33 63 aaKnown RBP1.79□□□□□ -2.12
TRA1YHR099W RPS30BP0CX34 63 aaKnown RBP1.79□□□□□ -2.12
TRA1YHR099W UTP20P35194 2493 aaKnown RBP1.79□□□□□ -2.12
TRA1YHR099W YLR255CO13574 117 aa1.79□□□□□ -2.12
TRA1YHR099W YHR213WP0CI67 198 aa1.78□□□□□ -2.12
TRA1YHR099W YOR034C-AQ3E735 80 aa1.78□□□□□ -2.12
TRA1YHR099W YLR162WQ06235 118 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms