RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	YJR128W	P47162	119 aa		2.84	□□□□□ -1.95
RSC30	YHR056C	YHR130C	P38834	111 aa		2.84	□□□□□ -1.96
RSC30	YHR056C	YGL034C	P53186	121 aa		2.84	□□□□□ -1.96
RSC30	YHR056C	RSM18	P40033	138 aa		2.83	□□□□□ -1.96
RSC30	YHR056C	YML108W	Q03759	105 aa		2.83	□□□□□ -1.96
RSC30	YHR056C	YGL230C	P53074	147 aa		2.82	□□□□□ -1.96
RSC30	YHR056C	GTT1	P40582	234 aa		2.81	□□□□□ -1.96
RSC30	YHR056C	YNR077C	P53758	84 aa		2.81	□□□□□ -1.96
RSC30	YHR056C	CWC27	Q02770	301 aa		2.81	□□□□□ -1.96
RSC30	YHR056C	YJL009W	P47078	108 aa		2.8	□□□□□ -1.96
RSC30	YHR056C	SEC11	P15367	167 aa		2.79	□□□□□ -1.96
RSC30	YHR056C	NSE4	P43124	402 aa		2.79	□□□□□ -1.96
RSC30	YHR056C	RSM19	P53733	91 aa	Predicted RBP	2.78	□□□□□ -1.96
RSC30	YHR056C	YHR073W-A	P0C5N7	58 aa		2.77	□□□□□ -1.97
RSC30	YHR056C	CGR1	P53188	120 aa		2.77	□□□□□ -1.97
RSC30	YHR056C	COF1	Q03048	143 aa	Known RBP	2.76	□□□□□ -1.97
RSC30	YHR056C	COA6	Q3E846	104 aa		2.76	□□□□□ -1.97
RSC30	YHR056C	TSC3	Q3E790	80 aa		2.76	□□□□□ -1.97
RSC30	YHR056C	MRPL44	P19956	98 aa		2.75	□□□□□ -1.97
RSC30	YHR056C	DSE2	P38844	325 aa		2.75	□□□□□ -1.97
RSC30	YHR056C	YLR162W	Q06235	118 aa		2.74	□□□□□ -1.97
RSC30	YHR056C	YBR182C-A	Q8TGU6	64 aa		2.74	□□□□□ -1.97
RSC30	YHR056C	YGR164W	P53291	111 aa		2.73	□□□□□ -1.97
RSC30	YHR056C	MPC3	P53311	146 aa		2.73	□□□□□ -1.97
RSC30	YHR056C	MIC10	Q96VH5	97 aa		2.71	□□□□□ -1.98
RSC30	YHR056C	MID2	P36027	376 aa		2.7	□□□□□ -1.98
RSC30	YHR056C	YFR057W	P43625	151 aa		2.7	□□□□□ -1.98
RSC30	YHR056C	YER187W	P40102	141 aa		2.69	□□□□□ -1.98
RSC30	YHR056C	ECM19	Q06011	112 aa		2.69	□□□□□ -1.98
RSC30	YHR056C	LSO2	Q3E772	92 aa	Known RBP	2.69	□□□□□ -1.98
RSC30	YHR056C	MSL1	P40567	111 aa	Predicted RBP	2.69	□□□□□ -1.98
RSC30	YHR056C	HUR1	P45820	110 aa		2.69	□□□□□ -1.98
RSC30	YHR056C	YDL012C	Q12489	107 aa		2.69	□□□□□ -1.98
RSC30	YHR056C	YOR034C-A	Q3E735	80 aa		2.68	□□□□□ -1.98
RSC30	YHR056C	UIP3	P39547	235 aa		2.68	□□□□□ -1.98
RSC30	YHR056C	CUE4	Q04201	117 aa	Predicted RBP	2.68	□□□□□ -1.98
RSC30	YHR056C	POP7	P38291	140 aa		2.67	□□□□□ -1.98
RSC30	YHR056C	YHR213W-B	Q8TGK1	99 aa		2.66	□□□□□ -1.98
RSC30	YHR056C	YBR016W	P38216	128 aa		2.65	□□□□□ -1.99
RSC30	YHR056C	YJL133C-A	Q3E7A3	74 aa		2.65	□□□□□ -1.99
RSC30	YHR056C	ELC1	Q03071	99 aa		2.64	□□□□□ -1.99
RSC30	YHR056C	YML054C-A	Q3E809	52 aa		2.64	□□□□□ -1.99
RSC30	YHR056C	TMA7	Q3E764	64 aa	Known RBP	2.63	□□□□□ -1.99
RSC30	YHR056C	ISD11	Q6Q560	94 aa		2.63	□□□□□ -1.99
RSC30	YHR056C	YPR153W	Q06537	140 aa		2.63	□□□□□ -1.99
RSC30	YHR056C	ATP18	P81450	59 aa		2.62	□□□□□ -1.99
RSC30	YHR056C	YJR107C-A	P0CT86	78 aa		2.61	□□□□□ -1.99
RSC30	YHR056C	COX23	P38824	151 aa		2.61	□□□□□ -1.99
RSC30	YHR056C	LSM8	P47093	109 aa	Known RBP	2.61	□□□□□ -1.99
RSC30	YHR056C	YLR255C	O13574	117 aa		2.61	□□□□□ -1.99
RSC30	YHR056C	EDC1	P53080	175 aa	Predicted RBP	2.61	□□□□□ -1.99
RSC30	YHR056C	SEN15	Q04675	128 aa		2.61	□□□□□ -1.99
RSC30	YHR056C	YIL002W-A	Q3E7Z5	69 aa		2.6	□□□□□ -1.99
RSC30	YHR056C	YER181C	P40097	107 aa		2.59	□□□□□ -1.99
RSC30	YHR056C	YFR009W-A	P0C5M9	85 aa		2.58	□□□□□ -2
RSC30	YHR056C	ICS3	P47034	131 aa		2.58	□□□□□ -2
RSC30	YHR056C	YOR304C-A	O14468	76 aa		2.58	□□□□□ -2
RSC30	YHR056C	LSM6	Q06406	86 aa	Known RBP	2.58	□□□□□ -2
RSC30	YHR056C	YOR316C-A	Q3E806	69 aa		2.57	□□□□□ -2
RSC30	YHR056C	YLR361C-A	Q3E795	98 aa		2.57	□□□□□ -2
RSC30	YHR056C	RPL36A	P05745	100 aa	Predicted RBP	2.56	□□□□□ -2
RSC30	YHR056C	SSS1	P35179	80 aa		2.56	□□□□□ -2
RSC30	YHR056C	YIL134C-A	Q45U18	67 aa		2.55	□□□□□ -2
RSC30	YHR056C	TDA2	P40045	126 aa		2.54	□□□□□ -2
RSC30	YHR056C	NAT5	Q08689	176 aa		2.54	□□□□□ -2
RSC30	YHR056C	PAI3	P01094	68 aa		2.53	□□□□□ -2
RSC30	YHR056C	YLR296W	Q05898	108 aa		2.51	□□□□□ -2.01
RSC30	YHR056C	YCR050C	P25630	102 aa		2.5	□□□□□ -2.01
RSC30	YHR056C	LIP1	Q03579	150 aa		2.49	□□□□□ -2.01
RSC30	YHR056C	RUB1	Q03919	77 aa		2.49	□□□□□ -2.01
RSC30	YHR056C	YAR064W	P39563	99 aa		2.48	□□□□□ -2.01
RSC30	YHR056C	SKI6	P46948	246 aa	Predicted RBP	2.48	□□□□□ -2.01
RSC30	YHR056C	RPL37A	P49166	88 aa	Known RBP	2.48	□□□□□ -2.01
RSC30	YHR056C	YLR363W-A	Q3E747	85 aa		2.48	□□□□□ -2.01
RSC30	YHR056C	GLC8	P41818	229 aa		2.46	□□□□□ -2.01
RSC30	YHR056C	SAE3	P89114	91 aa		2.46	□□□□□ -2.02
RSC30	YHR056C	YHL042W	P38729	150 aa		2.45	□□□□□ -2.02
RSC30	YHR056C	YJL144W	P47009	104 aa		2.45	□□□□□ -2.02
RSC30	YHR056C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.45	□□□□□ -2.02
RSC30	YHR056C	YDR381C-A	Q3E6R5	114 aa		2.44	□□□□□ -2.02
RSC30	YHR056C	RAD6	P06104	172 aa		2.43	□□□□□ -2.02
RSC30	YHR056C	YOL014W	Q08110	124 aa		2.43	□□□□□ -2.02
RSC30	YHR056C	YBL008W-A	Q3E821	79 aa		2.42	□□□□□ -2.02
RSC30	YHR056C	YPR170W-B	P0C5R9	85 aa		2.41	□□□□□ -2.02
RSC30	YHR056C	AIM4	P38305	123 aa	Predicted RBP	2.39	□□□□□ -2.03
RSC30	YHR056C	ATP20	Q12233	115 aa		2.38	□□□□□ -2.03
RSC30	YHR056C	YNL198C	P40166	100 aa		2.36	□□□□□ -2.03
RSC30	YHR056C	SLO1	Q3E784	85 aa		2.36	□□□□□ -2.03
RSC30	YHR056C	RPL38	P49167	78 aa	Known RBP	2.35	□□□□□ -2.03
RSC30	YHR056C	YIL102C-A	Q2V2P5	75 aa		2.34	□□□□□ -2.03
RSC30	YHR056C	YGR146C-A	Q8TGT9	53 aa		2.34	□□□□□ -2.04
RSC30	YHR056C	COX8	P04039	78 aa		2.33	□□□□□ -2.04
RSC30	YHR056C	HHF1	P02309	103 aa	Known RBP	2.33	□□□□□ -2.04
RSC30	YHR056C	RPP2A	P05319	106 aa	Known RBP	2.32	□□□□□ -2.04
RSC30	YHR056C	YIL156W-B	Q2V2P4	73 aa		2.32	□□□□□ -2.04
RSC30	YHR056C	YPL080C	Q02826	108 aa		2.31	□□□□□ -2.04
RSC30	YHR056C	INO4	P13902	151 aa		2.3	□□□□□ -2.04
RSC30	YHR056C	RPA12	P32529	125 aa	Known RBP	2.3	□□□□□ -2.04
RSC30	YHR056C	YBL044W	P38194	122 aa		2.29	□□□□□ -2.04
RSC30	YHR056C	YFL065C	P43539	102 aa		2.28	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms